| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719388
Identifier: 53719388
GI number: 53719388
Start: 2094346
End: 2095185
Strand: Reverse
Name: 53719388
Synonym: BPSL1774
Alternate gene names: NA
Gene position: 2095185-2094346 (Counterclockwise)
Preceding gene: 53719389
Following gene: 53719384
Centisome position: 51.42
GC content: 68.69
Gene sequence:
>840_bases ATGGCAAAGAAGAAACTCGTCTACATCTGGTCGCTCAGAAACGCCGCCGCCGACAAGGCGGGGCAGCAGGTGGACTACAA GGGCGGCACGCGCTACATGAAATCGGTGCTCGAATCGCTCGTCGGCGCATTGAACGACACCGAGCTCGGCGACGCGTATT CGCTCGAGCGCGTGATCTACGACGACGACGCGGGCTCGCCGCTCGACCGCGAGAAGCTCGCCGAGTACGGCTTCGCGTAC GAGCCCGGCAAGCGCTGGTTCTATCCGCCCGCGCTGCGCGTGCAGGGCCGCCTCGTCAACGATCTGCTGCTCGCGATTCC GTCCGAGTACCGGCGCGAGCCGCTCGCGTCGCCGGCGCGCCCGGCGGGCAAGCGCGCGTTCGAGGCGCGCCTGCGCGAGA CGCTCGACGCGCTCGGCGCCGATCTCGTCGTGCTCGACGGGCTGCTCGTGATCCTCGACGAACTCGTGCGCCCCGGCGCG CCGTATTGCCGGCGGATCGTCAACATCCACCCGGGCATCACGCGCGCGGACTCGCCGTACGAGCGGCGCGGCGCGTATGC GACGCTCGACGCGCTGTTCGGCGCGCGCGGGCAGAAGGTCGTCGACTGGAAGACGGGCCGGACCGTGCCCGTCGAGCCGC TCAGGATGACGGGCGCGTCGTTCCATTACGTCGACAACGGCGTCGATTCGGGCGAGGTGATCCACGACGTGCTGAACACC GAGATCGATCCGGACGACACGATCCTCGAGCTGCGCTGGAACAACTTCAACCGCAGCCTCTTTCCGGCGCTGCACGAAGG GCTCGCGATCATGGCGGGGCTCGACGCGCGCGTCGCGTGA
Upstream 100 bases:
>100_bases CGCACCGTGATCGCGACCGCGAAATACAACTGGTAAGCGCGTTTCATCACCCGATGGGCGGCGCGGCGGCGCGCCGCCCG AACGAGAGGACAACACTGCG
Downstream 100 bases:
>100_bases GCGGCGCGGCGCACGACACGCACGACACGCGCGGGCCGTGCGCGGCGGCATGGCGAAGCGGCCGGCGACGCGCACGCGTT GCGCGGCGGCTCGCGCGCTT
Product: putative siderophore biosynthesis-like protein
Products: NA
Alternate protein names: Siderophore Biosynthesis Related Protein
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MAKKKLVYIWSLRNAAADKAGQQVDYKGGTRYMKSVLESLVGALNDTELGDAYSLERVIYDDDAGSPLDREKLAEYGFAY EPGKRWFYPPALRVQGRLVNDLLLAIPSEYRREPLASPARPAGKRAFEARLRETLDALGADLVVLDGLLVILDELVRPGA PYCRRIVNIHPGITRADSPYERRGAYATLDALFGARGQKVVDWKTGRTVPVEPLRMTGASFHYVDNGVDSGEVIHDVLNT EIDPDDTILELRWNNFNRSLFPALHEGLAIMAGLDARVA
Sequences:
>Translated_279_residues MAKKKLVYIWSLRNAAADKAGQQVDYKGGTRYMKSVLESLVGALNDTELGDAYSLERVIYDDDAGSPLDREKLAEYGFAY EPGKRWFYPPALRVQGRLVNDLLLAIPSEYRREPLASPARPAGKRAFEARLRETLDALGADLVVLDGLLVILDELVRPGA PYCRRIVNIHPGITRADSPYERRGAYATLDALFGARGQKVVDWKTGRTVPVEPLRMTGASFHYVDNGVDSGEVIHDVLNT EIDPDDTILELRWNNFNRSLFPALHEGLAIMAGLDARVA >Mature_278_residues AKKKLVYIWSLRNAAADKAGQQVDYKGGTRYMKSVLESLVGALNDTELGDAYSLERVIYDDDAGSPLDREKLAEYGFAYE PGKRWFYPPALRVQGRLVNDLLLAIPSEYRREPLASPARPAGKRAFEARLRETLDALGADLVVLDGLLVILDELVRPGAP YCRRIVNIHPGITRADSPYERRGAYATLDALFGARGQKVVDWKTGRTVPVEPLRMTGASFHYVDNGVDSGEVIHDVLNTE IDPDDTILELRWNNFNRSLFPALHEGLAIMAGLDARVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31000; Mature: 30868
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKKLVYIWSLRNAAADKAGQQVDYKGGTRYMKSVLESLVGALNDTELGDAYSLERVIY CCCCEEEEEEECCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEEE DDDAGSPLDREKLAEYGFAYEPGKRWFYPPALRVQGRLVNDLLLAIPSEYRREPLASPAR ECCCCCCCCHHHHHHCCCEECCCCCEECCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCC PAGKRAFEARLRETLDALGADLVVLDGLLVILDELVRPGAPYCRRIVNIHPGITRADSPY CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCH ERRGAYATLDALFGARGQKVVDWKTGRTVPVEPLRMTGASFHYVDNGVDSGEVIHDVLNT HHHCCHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHCCCEEEEECCCCCCHHHHHHHHCC EIDPDDTILELRWNNFNRSLFPALHEGLAIMAGLDARVA CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AKKKLVYIWSLRNAAADKAGQQVDYKGGTRYMKSVLESLVGALNDTELGDAYSLERVIY CCCEEEEEEECCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEEE DDDAGSPLDREKLAEYGFAYEPGKRWFYPPALRVQGRLVNDLLLAIPSEYRREPLASPAR ECCCCCCCCHHHHHHCCCEECCCCCEECCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCC PAGKRAFEARLRETLDALGADLVVLDGLLVILDELVRPGAPYCRRIVNIHPGITRADSPY CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCH ERRGAYATLDALFGARGQKVVDWKTGRTVPVEPLRMTGASFHYVDNGVDSGEVIHDVLNT HHHCCHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHCCCEEEEECCCCCCHHHHHHHHCC EIDPDDTILELRWNNFNRSLFPALHEGLAIMAGLDARVA CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA