| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719309
Identifier: 53719309
GI number: 53719309
Start: 1967586
End: 1968296
Strand: Reverse
Name: 53719309
Synonym: BPSL1688
Alternate gene names: NA
Gene position: 1968296-1967586 (Counterclockwise)
Preceding gene: 53719310
Following gene: 53719304
Centisome position: 48.31
GC content: 67.51
Gene sequence:
>711_bases TTGAGCCCGTGGCGCGGCAACACGCCGCCGTGCCGGTCCGCAACGCTGCCCGTCCTGCGCATCTTCGCAATGGAAACCCG AGACTTGGTCACCTGGCTGGCAACCGACCTGACGCCGGTTGACCCCGGCGTAGTTTTGCAGCGGCTCTACCACGCGCTCC TCGTCGGCTTCGCCGGCAGCACCGCCCTCCTCGTCGCGTTGTATGGCATCCGCAGCGATATGCCCCAATTGATCCTGACG ACGATGTTCTGGGTGCGGTTCGCGTTCCCGCTCGCCGTCGTCTTCTCGGCAACGCGGCTCGCCGAGCGCCTTGGCCGCCC TGGCGCGCGACTGTGTTCCGTTGGGCTTGCGACCGCGCTGCCGGTTGCCGCGATGCTGCTTGCCACGGGCGGCGTGTTGA TTGCGACTCCGCCCGGCTACCGGCTGCAACTGGTGCTCGGAACGACGTGGCGGACCACGGTCGTGGACATCGTGCTGCTG TCGCTGCCGCCGCTCGCCGCCGCGTTGCATGCGATGAAGCAACTCGCGCCAACGCGTCTCGTGCTCGCCGGCGCGGGTGC CGGCCTTCTTGCCGGCGCACAGGCGCTCGTCGTCTATTCGCTCTACTGCGCCGAGATGTCGATGCCGTTCTGGGGTGTCT GGTACATGTTGTCGCTCATGCTAACGGTGGCCCTCGGTGCGATGCTTGCCCCGATCTGGCTGCGCTGGTAG
Upstream 100 bases:
>100_bases CGATCCACCTGACGTGGGCGGCAATGGCCCTCGGTATCGCGGCGTGGGGCCCGGGCCGCCTCTCGCTCGACTATCTGCTC GGTGATCGCGCGCCGCGCAG
Downstream 100 bases:
>100_bases GCACGGCGCCCCAGCCCCTCACCAGCGCAGCCAGATCGGAGCGACGAGTGCGCCGAGTGCGGCCGGCAACGCCATCCCGA GCAGATACCAGACGCCCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MSPWRGNTPPCRSATLPVLRIFAMETRDLVTWLATDLTPVDPGVVLQRLYHALLVGFAGSTALLVALYGIRSDMPQLILT TMFWVRFAFPLAVVFSATRLAERLGRPGARLCSVGLATALPVAAMLLATGGVLIATPPGYRLQLVLGTTWRTTVVDIVLL SLPPLAAALHAMKQLAPTRLVLAGAGAGLLAGAQALVVYSLYCAEMSMPFWGVWYMLSLMLTVALGAMLAPIWLRW
Sequences:
>Translated_236_residues MSPWRGNTPPCRSATLPVLRIFAMETRDLVTWLATDLTPVDPGVVLQRLYHALLVGFAGSTALLVALYGIRSDMPQLILT TMFWVRFAFPLAVVFSATRLAERLGRPGARLCSVGLATALPVAAMLLATGGVLIATPPGYRLQLVLGTTWRTTVVDIVLL SLPPLAAALHAMKQLAPTRLVLAGAGAGLLAGAQALVVYSLYCAEMSMPFWGVWYMLSLMLTVALGAMLAPIWLRW >Mature_235_residues SPWRGNTPPCRSATLPVLRIFAMETRDLVTWLATDLTPVDPGVVLQRLYHALLVGFAGSTALLVALYGIRSDMPQLILTT MFWVRFAFPLAVVFSATRLAERLGRPGARLCSVGLATALPVAAMLLATGGVLIATPPGYRLQLVLGTTWRTTVVDIVLLS LPPLAAALHAMKQLAPTRLVLAGAGAGLLAGAQALVVYSLYCAEMSMPFWGVWYMLSLMLTVALGAMLAPIWLRW
Specific function: Unknown
COG id: COG4944
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25387; Mature: 25256
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPWRGNTPPCRSATLPVLRIFAMETRDLVTWLATDLTPVDPGVVLQRLYHALLVGFAGS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCH TALLVALYGIRSDMPQLILTTMFWVRFAFPLAVVFSATRLAERLGRPGARLCSVGLATAL HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH PVAAMLLATGGVLIATPPGYRLQLVLGTTWRTTVVDIVLLSLPPLAAALHAMKQLAPTRL HHHHHHHHCCCEEEECCCCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHE VLAGAGAGLLAGAQALVVYSLYCAEMSMPFWGVWYMLSLMLTVALGAMLAPIWLRW EEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SPWRGNTPPCRSATLPVLRIFAMETRDLVTWLATDLTPVDPGVVLQRLYHALLVGFAGS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCH TALLVALYGIRSDMPQLILTTMFWVRFAFPLAVVFSATRLAERLGRPGARLCSVGLATAL HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH PVAAMLLATGGVLIATPPGYRLQLVLGTTWRTTVVDIVLLSLPPLAAALHAMKQLAPTRL HHHHHHHHCCCEEEECCCCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHE VLAGAGAGLLAGAQALVVYSLYCAEMSMPFWGVWYMLSLMLTVALGAMLAPIWLRW EEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA