Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

Click here to switch to the map view.

The map label for this gene is 53719234

Identifier: 53719234

GI number: 53719234

Start: 1857508

End: 1858344

Strand: Reverse

Name: 53719234

Synonym: BPSL1604

Alternate gene names: NA

Gene position: 1858344-1857508 (Counterclockwise)

Preceding gene: 53719235

Following gene: 53719233

Centisome position: 45.61

GC content: 70.73

Gene sequence:

>837_bases
ATGAGTACGCTGACCTCCCGCCCGCTGTGGGCGCAAATCCGCGTGATCGCCGGCAAGGAATTCCACGACCGGATCCGCAA
CCGCTGGGTGCTCGCGATCTCGATCGTGTTCGCCGCGTTCACGCTCGCGATCTCGTACTTCGGCGCGGCCGCGCAGGGCG
CGGTCGGCTTTCACGGAATCGAGCCGCTGATCGCGAGCCTCGTGAGCCTCGCGATCTATCTGCTGCCGCTCATCGCGCTG
ATTCTCGGCTTCGACGCGCTCGTCGGCGAGCGCGAGCGCGGCACGCTGAGCCTGCTGCTGTCGTACCCGCTCACCCGCAC
CGAGCTGCTCGTCGGCAAGTACGTCGGCCTCGCGGCCGCGCTCACCTGCGCGACGCTCGCGGGCTTCGGCGCGGCGGGCG
CGGTGATCGCCGCGCGCATGAGCGCCGCCGACTGGTATCAGTACGCGGGCTTCGTGCTGAGCGCGGTGCTGCTCGGCTGG
GTGTTCCTGAGCCTCGCCGTATGCGCGTCGGCGTTCTGCGCGAGCCGCACGTCGGCGAGCGGCGTCGCGATCGCGCTGTG
GTTCTGCTTCGTGCTCGTGTACGACCTGCTGCTGCTCGGCGCGCTCGTGCTCACGGGCGGCGCCGGGCTCGGCCCCGCGC
TGCCGCTGTTGCTGCTGCTCAATCCGGCCGACGTGTTCCGCGTGCTGAACATCTTCGGCCCGGGCGATCTGCGCGCGATG
TTCGGCGCGGTCAGCGCCTTTCCCGCGGCGCTCGCGTCGCCCCTGTTGCTCGGCCCGGTGATGCTCGCGTGGATCGCGGC
GCCGCTCGGCCTCGCCGCCTGGAGATTCAATCGATGA

Upstream 100 bases:

>100_bases
CCGCGCTGGCGCCGCTCGGCGCGCGCATCGTCGACCTGCGCATTCACGAGCCGTCGCTCGAAGACATGTTTCTCGGCTAT
GCCGGCTGCGAGGCGAACGC

Downstream 100 bases:

>100_bases
AACGCCGTTTCCTTTCCGCCGCCGTGCGCACGAGCATCGCGGCGCTCGCCAGCGCCGCGCTCGTGGCCGCATGCGGCCAC
GACGCGCAGACGCCGCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MSTLTSRPLWAQIRVIAGKEFHDRIRNRWVLAISIVFAAFTLAISYFGAAAQGAVGFHGIEPLIASLVSLAIYLLPLIAL
ILGFDALVGERERGTLSLLLSYPLTRTELLVGKYVGLAAALTCATLAGFGAAGAVIAARMSAADWYQYAGFVLSAVLLGW
VFLSLAVCASAFCASRTSASGVAIALWFCFVLVYDLLLLGALVLTGGAGLGPALPLLLLLNPADVFRVLNIFGPGDLRAM
FGAVSAFPAALASPLLLGPVMLAWIAAPLGLAAWRFNR

Sequences:

>Translated_278_residues
MSTLTSRPLWAQIRVIAGKEFHDRIRNRWVLAISIVFAAFTLAISYFGAAAQGAVGFHGIEPLIASLVSLAIYLLPLIAL
ILGFDALVGERERGTLSLLLSYPLTRTELLVGKYVGLAAALTCATLAGFGAAGAVIAARMSAADWYQYAGFVLSAVLLGW
VFLSLAVCASAFCASRTSASGVAIALWFCFVLVYDLLLLGALVLTGGAGLGPALPLLLLLNPADVFRVLNIFGPGDLRAM
FGAVSAFPAALASPLLLGPVMLAWIAAPLGLAAWRFNR
>Mature_277_residues
STLTSRPLWAQIRVIAGKEFHDRIRNRWVLAISIVFAAFTLAISYFGAAAQGAVGFHGIEPLIASLVSLAIYLLPLIALI
LGFDALVGERERGTLSLLLSYPLTRTELLVGKYVGLAAALTCATLAGFGAAGAVIAARMSAADWYQYAGFVLSAVLLGWV
FLSLAVCASAFCASRTSASGVAIALWFCFVLVYDLLLLGALVLTGGAGLGPALPLLLLLNPADVFRVLNIFGPGDLRAMF
GAVSAFPAALASPLLLGPVMLAWIAAPLGLAAWRFNR

Specific function: Involved in copper processing [H]

COG id: COG1277

COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29155; Mature: 29024

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLTSRPLWAQIRVIAGKEFHDRIRNRWVLAISIVFAAFTLAISYFGAAAQGAVGFHGI
CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
EPLIASLVSLAIYLLPLIALILGFDALVGERERGTLSLLLSYPLTRTELLVGKYVGLAAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHH
LTCATLAGFGAAGAVIAARMSAADWYQYAGFVLSAVLLGWVFLSLAVCASAFCASRTSAS
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GVAIALWFCFVLVYDLLLLGALVLTGGAGLGPALPLLLLLNPADVFRVLNIFGPGDLRAM
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHH
FGAVSAFPAALASPLLLGPVMLAWIAAPLGLAAWRFNR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
STLTSRPLWAQIRVIAGKEFHDRIRNRWVLAISIVFAAFTLAISYFGAAAQGAVGFHGI
CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
EPLIASLVSLAIYLLPLIALILGFDALVGERERGTLSLLLSYPLTRTELLVGKYVGLAAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHH
LTCATLAGFGAAGAVIAARMSAADWYQYAGFVLSAVLLGWVFLSLAVCASAFCASRTSAS
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GVAIALWFCFVLVYDLLLLGALVLTGGAGLGPALPLLLLLNPADVFRVLNIFGPGDLRAM
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHH
FGAVSAFPAALASPLLLGPVMLAWIAAPLGLAAWRFNR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2170125 [H]