| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719233
Identifier: 53719233
GI number: 53719233
Start: 1856981
End: 1857511
Strand: Reverse
Name: 53719233
Synonym: BPSL1603
Alternate gene names: NA
Gene position: 1857511-1856981 (Counterclockwise)
Preceding gene: 53719234
Following gene: 53719232
Centisome position: 45.59
GC content: 70.43
Gene sequence:
>531_bases ATGAAACGCCGTTTCCTTTCCGCCGCCGTGCGCACGAGCATCGCGGCGCTCGCCAGCGCCGCGCTCGTGGCCGCATGCGG CCACGACGCGCAGACGCCGCCGCCCGCGCGCGAGATCACCGACGCGACCGTCAGCGTGCTCGACGGCATGAGCCTGAAGG ACTACCCGGGCCCGAAGGCGCAGATCGTCTATGCGGACGGCGAGCCGGACTTCTTCTGCGACACGCTCGGCCTCTTTTCC GTCTACCTGCGCCCCGAGCACGACCGCAAGGTCCGCGCGCTGTACGTGCAGGACATGGGCGCGACCGACTGGCAGCACCC GGTCGGCCACTGGATCGACGCGAAGCGCGCGATCTACGTGATCGGCTCGAAGAAGCCGGGCGCGATGGGCCGGACGTTCG CGTCGTTCGCCCGCGAGGCGGACGCCGCGCGCTTCGCGAAGGCCGAGGGCGGCAAGCTGTACCGCTTCGGCGAGATCACG CCCGAGATGGCGACGACCGACGGCGGCGTCGTCAAGGACCAGACGATGTGA
Upstream 100 bases:
>100_bases GCGCCTTTCCCGCGGCGCTCGCGTCGCCCCTGTTGCTCGGCCCGGTGATGCTCGCGTGGATCGCGGCGCCGCTCGGCCTC GCCGCCTGGAGATTCAATCG
Downstream 100 bases:
>100_bases GGAACCCGAAATGACCCATTTCTTCCGCAACCTGCCCAACGAGGCGGCCCGGCAGATCGACGCGCTGAGCCGGCTGCTGT ACGACCTGCGCGAGGACCGC
Product: putative lipoprotein
Products: NA
Alternate protein names: NosL Protein; Lipoprotein Involved In Nitrous Oxide Reduction; Protein Disulfide Isomerase NosL; Lipoprotein; Nitrous Oxide Reductase Accessory Protein; NosL Lipoprotein; Protein Disulfide Isomerase NosL Family Protein; Nosl Family Protein; NosL Copper Chaperone
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MKRRFLSAAVRTSIAALASAALVAACGHDAQTPPPAREITDATVSVLDGMSLKDYPGPKAQIVYADGEPDFFCDTLGLFS VYLRPEHDRKVRALYVQDMGATDWQHPVGHWIDAKRAIYVIGSKKPGAMGRTFASFAREADAARFAKAEGGKLYRFGEIT PEMATTDGGVVKDQTM
Sequences:
>Translated_176_residues MKRRFLSAAVRTSIAALASAALVAACGHDAQTPPPAREITDATVSVLDGMSLKDYPGPKAQIVYADGEPDFFCDTLGLFS VYLRPEHDRKVRALYVQDMGATDWQHPVGHWIDAKRAIYVIGSKKPGAMGRTFASFAREADAARFAKAEGGKLYRFGEIT PEMATTDGGVVKDQTM >Mature_176_residues MKRRFLSAAVRTSIAALASAALVAACGHDAQTPPPAREITDATVSVLDGMSLKDYPGPKAQIVYADGEPDFFCDTLGLFS VYLRPEHDRKVRALYVQDMGATDWQHPVGHWIDAKRAIYVIGSKKPGAMGRTFASFAREADAARFAKAEGGKLYRFGEIT PEMATTDGGVVKDQTM
Specific function: Unknown
COG id: COG4314
COG function: function code C; Predicted lipoprotein involved in nitrous oxide reduction
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19069; Mature: 19069
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRRFLSAAVRTSIAALASAALVAACGHDAQTPPPAREITDATVSVLDGMSLKDYPGPKA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCE QIVYADGEPDFFCDTLGLFSVYLRPEHDRKVRALYVQDMGATDWQHPVGHWIDAKRAIYV EEEEECCCCCHHHHHHHHHHEEECCCCCCEEEEEEEECCCCCCCCCCHHHHCCCCEEEEE IGSKKPGAMGRTFASFAREADAARFAKAEGGKLYRFGEITPEMATTDGGVVKDQTM EECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEECCCCC >Mature Secondary Structure MKRRFLSAAVRTSIAALASAALVAACGHDAQTPPPAREITDATVSVLDGMSLKDYPGPKA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCE QIVYADGEPDFFCDTLGLFSVYLRPEHDRKVRALYVQDMGATDWQHPVGHWIDAKRAIYV EEEEECCCCCHHHHHHHHHHEEECCCCCCEEEEEEEECCCCCCCCCCHHHHCCCCEEEEE IGSKKPGAMGRTFASFAREADAARFAKAEGGKLYRFGEITPEMATTDGGVVKDQTM EECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA