| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is blh [H]
Identifier: 53719194
GI number: 53719194
Start: 1809648
End: 1811318
Strand: Reverse
Name: blh [H]
Synonym: BPSL1560
Alternate gene names: 53719194
Gene position: 1811318-1809648 (Counterclockwise)
Preceding gene: 53719195
Following gene: 53719193
Centisome position: 44.45
GC content: 71.27
Gene sequence:
>1671_bases ATGGAAATCCGCAAGCTGACCGACACGCTATCGGTCTCCCCCCAGCTCGTCGCCGCCGATCTGCCCGCGATCGCGCAGGC CGGCTTTCGCGCGATCATCTGCAACCGGCCGGACGGCGAAGGCCCAGACCAGCCGACCGTCGCCGAGATCGACGCGGCCG CGCAGCGCTTCGGCATCGCGGTCCACTATCTGCCCGTCGATTCGGGCAAGGCCACCGATGCGCAGGGCGAACAGTTCGGC GTGCTGCTCGACACGCTCGCTTCGCCCGTGCTCGCGTACTGCCGCACCGGCATGCGCTCGGCCACGCTGTGGGGGCTGTC GCAGGCGGGGCTGCGGCCGCTGAACGACATCGTCGCGACGGGCCGCGCGGCCGGCTACGATCTCGCCGCGCTCGGCCGCC GGATCATGCAGCGCAGCCAGAGCGCGACGGCGCAAACCGTCGAGGCGAGCCACGACATCGTGATCGTCGGCGCGGGCGCC GCGGGCATCGCGGTCGCCTCGAGCCTGCTCGCGCGTGAGCCCTCGCTCGACATCGCCGTCGTCGATCCGGCCGACACCCA TTACTACCAGCCCGGCTGGACGATGGTCGGCGCGGGCGTGTTCCAGCCGGGCACGACCGCGCGGCGCATGGCCGCCGTGC TGCCGCGCGGCGTGCACTGGATCAAGGCCGCCGTCGCCGCGTTCGAGCCCGACACGCACACGGTCGTGCTCGACGGCTGC CGGCTCGTGCGCTACCGGCAGCTCGTCGTCTGCCCGGGCCTGAAGCTCGACTGGCACGGCATCGAGGGGCTGCCCGAGAC GCTCGGCAGGAACGGCGTCACGTCGAACTATCGCTACGATCTCGCGCCGTACACGTGGCAGCTCGTGCGCGCGTTCGCCG GCCGGCGCGCGCTGTTCACGCAGCCGCCGATGCCGATCAAGTGCGCGGGCGCGCCGCAAAAGGCGATGTATCTGTCGGCC GACCACTGGCGGCGCACGAACCGCCTCGATGCGATCGACATCGAGTTCTTCAATGCGGGCGCGGCGCTCTTCGGCGTCGC CGAGTACGTGCCCGCGCTGATGGAGTACGTGAAGCGCTACGGCATCGCGCTGAATTTCGGCCACAACCTGATCGCGATCG ACGGCGAGCGCAAGCGCGCGACGTTCGCGCGCGCGCTGCCGGAAGGCGGCACCGAGACGCTCACGCGCGAATTCGACATG ATCCACGTCGTGCCGCCGCAGAAGGCGCCCGATTTCGTGCGCGCGAGCCCGCTCGCCGACGCGGCCGGCTGGATCGACGT CGATCCGGCGACGCTGCGCCACCGCCGCCACGCGGACGTGTTCGCGCTCGGCGACGTGACGAACACGACGAACGCGAAGA CCGCGGCCGCCGCGCGCAAGCAGGCGCCCGTCGTCGCGCACAACGTGCTCGCCGCGCTCGGCAAGGCCCAGGGCGACGCG GCCTACGACGGCTACGGCTCGTGCCCGCTCACCGTCGAGCGCGGCAAGATCGTGCTCGCCGAATTCCTGTACGGCGGCAA GCTCGCGCCGACCTTCCCCGCATGGCTCATCGACGGCAAACGCCCGTCGCGGCTCGCGTGGCTGCTCAAGGAGCGGCTGC TGCCGCCTCTTTACTGGCAGGCGATGCTCAAGGGCCGCGAATGGCTCGCGAAACCCGAGATCGTCGGCTGA
Upstream 100 bases:
>100_bases CCGAGGACAACGGCGTGCGCTACCTGAAGATCCCGCTCGACGCGATCTGAGCCCGCGGCCCGCCTTCCCCAACGACGCAC GACATACGACCACGCCCATC
Downstream 100 bases:
>100_bases CCGCCGCGCTTTGACGACCCTTGTCCGGAACGGCGCAGCATGTTGATTTCTCTGGTGTTGGGCAGCATCGTCGGCGCGGT GCTGGGGCTGACGGGCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 556; Mature: 556
Protein sequence:
>556_residues MEIRKLTDTLSVSPQLVAADLPAIAQAGFRAIICNRPDGEGPDQPTVAEIDAAAQRFGIAVHYLPVDSGKATDAQGEQFG VLLDTLASPVLAYCRTGMRSATLWGLSQAGLRPLNDIVATGRAAGYDLAALGRRIMQRSQSATAQTVEASHDIVIVGAGA AGIAVASSLLAREPSLDIAVVDPADTHYYQPGWTMVGAGVFQPGTTARRMAAVLPRGVHWIKAAVAAFEPDTHTVVLDGC RLVRYRQLVVCPGLKLDWHGIEGLPETLGRNGVTSNYRYDLAPYTWQLVRAFAGRRALFTQPPMPIKCAGAPQKAMYLSA DHWRRTNRLDAIDIEFFNAGAALFGVAEYVPALMEYVKRYGIALNFGHNLIAIDGERKRATFARALPEGGTETLTREFDM IHVVPPQKAPDFVRASPLADAAGWIDVDPATLRHRRHADVFALGDVTNTTNAKTAAAARKQAPVVAHNVLAALGKAQGDA AYDGYGSCPLTVERGKIVLAEFLYGGKLAPTFPAWLIDGKRPSRLAWLLKERLLPPLYWQAMLKGREWLAKPEIVG
Sequences:
>Translated_556_residues MEIRKLTDTLSVSPQLVAADLPAIAQAGFRAIICNRPDGEGPDQPTVAEIDAAAQRFGIAVHYLPVDSGKATDAQGEQFG VLLDTLASPVLAYCRTGMRSATLWGLSQAGLRPLNDIVATGRAAGYDLAALGRRIMQRSQSATAQTVEASHDIVIVGAGA AGIAVASSLLAREPSLDIAVVDPADTHYYQPGWTMVGAGVFQPGTTARRMAAVLPRGVHWIKAAVAAFEPDTHTVVLDGC RLVRYRQLVVCPGLKLDWHGIEGLPETLGRNGVTSNYRYDLAPYTWQLVRAFAGRRALFTQPPMPIKCAGAPQKAMYLSA DHWRRTNRLDAIDIEFFNAGAALFGVAEYVPALMEYVKRYGIALNFGHNLIAIDGERKRATFARALPEGGTETLTREFDM IHVVPPQKAPDFVRASPLADAAGWIDVDPATLRHRRHADVFALGDVTNTTNAKTAAAARKQAPVVAHNVLAALGKAQGDA AYDGYGSCPLTVERGKIVLAEFLYGGKLAPTFPAWLIDGKRPSRLAWLLKERLLPPLYWQAMLKGREWLAKPEIVG >Mature_556_residues MEIRKLTDTLSVSPQLVAADLPAIAQAGFRAIICNRPDGEGPDQPTVAEIDAAAQRFGIAVHYLPVDSGKATDAQGEQFG VLLDTLASPVLAYCRTGMRSATLWGLSQAGLRPLNDIVATGRAAGYDLAALGRRIMQRSQSATAQTVEASHDIVIVGAGA AGIAVASSLLAREPSLDIAVVDPADTHYYQPGWTMVGAGVFQPGTTARRMAAVLPRGVHWIKAAVAAFEPDTHTVVLDGC RLVRYRQLVVCPGLKLDWHGIEGLPETLGRNGVTSNYRYDLAPYTWQLVRAFAGRRALFTQPPMPIKCAGAPQKAMYLSA DHWRRTNRLDAIDIEFFNAGAALFGVAEYVPALMEYVKRYGIALNFGHNLIAIDGERKRATFARALPEGGTETLTREFDM IHVVPPQKAPDFVRASPLADAAGWIDVDPATLRHRRHADVFALGDVTNTTNAKTAAAARKQAPVVAHNVLAALGKAQGDA AYDGYGSCPLTVERGKIVLAEFLYGGKLAPTFPAWLIDGKRPSRLAWLLKERLLPPLYWQAMLKGREWLAKPEIVG
Specific function: Unknown
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI10864011, Length=395, Percent_Identity=37.7215189873418, Blast_Score=306, Evalue=3e-83, Organism=Caenorhabditis elegans, GI115534373, Length=343, Percent_Identity=35.8600583090379, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI17539680, Length=432, Percent_Identity=30.5555555555556, Blast_Score=216, Evalue=2e-56, Organism=Drosophila melanogaster, GI24657386, Length=386, Percent_Identity=37.8238341968912, Blast_Score=261, Evalue=1e-69, Organism=Drosophila melanogaster, GI24657391, Length=386, Percent_Identity=37.8238341968912, Blast_Score=261, Evalue=1e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 60023; Mature: 60023
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIRKLTDTLSVSPQLVAADLPAIAQAGFRAIICNRPDGEGPDQPTVAEIDAAAQRFGIA CCHHHHHHHHCCCCHHEECCCCHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCEE VHYLPVDSGKATDAQGEQFGVLLDTLASPVLAYCRTGMRSATLWGLSQAGLRPLNDIVAT EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHCCCHHHHHHHC GRAAGYDLAALGRRIMQRSQSATAQTVEASHDIVIVGAGAAGIAVASSLLAREPSLDIAV CCCCCCCHHHHHHHHHHHHHCHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCCCEEE VDPADTHYYQPGWTMVGAGVFQPGTTARRMAAVLPRGVHWIKAAVAAFEPDTHTVVLDGC ECCCCCCEECCCCEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEECCH RLVRYRQLVVCPGLKLDWHGIEGLPETLGRNGVTSNYRYDLAPYTWQLVRAFAGRRALFT HHHHHHHEEECCCCEEECCCCCCCHHHHCCCCCCCCCEECCCHHHHHHHHHHHCCCEEEC QPPMPIKCAGAPQKAMYLSADHWRRTNRLDAIDIEFFNAGAALFGVAEYVPALMEYVKRY CCCCCEEECCCCCCEEEEEHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHC GIALNFGHNLIAIDGERKRATFARALPEGGTETLTREFDMIHVVPPQKAPDFVRASPLAD CEEEECCCEEEEECCCHHHHHHHHHCCCCCHHHHHHCCCEEEEECCCCCCCCHHCCCCCC AAGWIDVDPATLRHRRHADVFALGDVTNTTNAKTAAAARKQAPVVAHNVLAALGKAQGDA CCCEEECCHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCC AYDGYGSCPLTVERGKIVLAEFLYGGKLAPTFPAWLIDGKRPSRLAWLLKERLLPPLYWQ CCCCCCCCCEEEECCCEEEEEHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCHHHHH AMLKGREWLAKPEIVG HHHHCHHHCCCCCCCC >Mature Secondary Structure MEIRKLTDTLSVSPQLVAADLPAIAQAGFRAIICNRPDGEGPDQPTVAEIDAAAQRFGIA CCHHHHHHHHCCCCHHEECCCCHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCEE VHYLPVDSGKATDAQGEQFGVLLDTLASPVLAYCRTGMRSATLWGLSQAGLRPLNDIVAT EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHCCCHHHHHHHC GRAAGYDLAALGRRIMQRSQSATAQTVEASHDIVIVGAGAAGIAVASSLLAREPSLDIAV CCCCCCCHHHHHHHHHHHHHCHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCCCEEE VDPADTHYYQPGWTMVGAGVFQPGTTARRMAAVLPRGVHWIKAAVAAFEPDTHTVVLDGC ECCCCCCEECCCCEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEECCH RLVRYRQLVVCPGLKLDWHGIEGLPETLGRNGVTSNYRYDLAPYTWQLVRAFAGRRALFT HHHHHHHEEECCCCEEECCCCCCCHHHHCCCCCCCCCEECCCHHHHHHHHHHHCCCEEEC QPPMPIKCAGAPQKAMYLSADHWRRTNRLDAIDIEFFNAGAALFGVAEYVPALMEYVKRY CCCCCEEECCCCCCEEEEEHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHC GIALNFGHNLIAIDGERKRATFARALPEGGTETLTREFDMIHVVPPQKAPDFVRASPLAD CEEEECCCEEEEECCCHHHHHHHHHCCCCCHHHHHHCCCEEEEECCCCCCCCHHCCCCCC AAGWIDVDPATLRHRRHADVFALGDVTNTTNAKTAAAARKQAPVVAHNVLAALGKAQGDA CCCEEECCHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCC AYDGYGSCPLTVERGKIVLAEFLYGGKLAPTFPAWLIDGKRPSRLAWLLKERLLPPLYWQ CCCCCCCCCEEEECCCEEEEEHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCHHHHH AMLKGREWLAKPEIVG HHHHCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]