Click here to switch to the map view.

The map label for this gene is 53719120

Identifier: 53719120

GI number: 53719120

Start: 1724107

End: 1724802

Strand: Reverse

Name: 53719120

Synonym: BPSL1486

Alternate gene names: NA

Gene position: 1724802-1724107 (Counterclockwise)

Preceding gene: 53719123

Following gene: 53719119

Centisome position: 42.33

GC content: 71.55

Gene sequence:

>696_bases
ATGCTTGAACGCGACGCCCGGCTCGCGCCGCGCGCCGGCTTCGTTCCGACAGCCACTCACCCGTTCCATCAAAAGGGAGC
TCCCGCCATGCTGAAAAAGCTGCTGATGCTGGTCGTCGCACTGTCGCTTTCGCTGACCGCCGCGCTCGCCGCCGCGGTCG
AAGTCAACACCGCCGACCAGGCGGCGCTCGAATCGGTGAAGGGCCTCGGCCCGGTGAAATCGAAGGCGATCATCGACGAG
CGCGCGAAGAACGGCCCGTTCAAGGATGCCGACGATCTCGCGAACCGCGTGAAGGGTCTCGGCGCGAAATCGGTCGCCCA
TCTCGAGGCAGCGGGCCTGACGATCGGCGGCTCGACCACGCCGCCGACGGGCGCGAAGGCGAAGACCGGCACCGCGAAAC
CGGCCGCGACCGCGACGCCGGCGCCCGCTCCGGCACCGGCCCCGACCACCTCGAGCGCAACGCCCGCGCCGTCCGCGGCG
ACGCCCGCTCCCGCCACGGCCACGCCGTCGACTGCGGCGAGCGCCCCGGCCGCGAAAAAGTCCCGTTCGTCGAAGAAGCA
GGACAAGGCCGCCGCCGCGAGCGCCGCGGCGCAAGCGAGCGCGCCGGCCGCCGCGTCGACGACGAAGGCGAAAGGCTCGA
AGAAGAGCAGGAAGAACAAGGCGGCGACGCCGGCGTCCGCGGCATCGGGCGCATAA

Upstream 100 bases:

>100_bases
ATGGTCAAAACCCGCCCGCATCCGGCACGGCAGCCTTTACAGTGTCGCCGTCGATGCGCAACATTGCCCCGCTGTCTTAA
AAAGGGCACGCATTTGTCCT

Downstream 100 bases:

>100_bases
GTCGGGCGCCGCGCGACGCGCGGCTTCTTCGTTCCACCGGCGCCGTGCGCGGCGCCGCCTCAACCTAGCAGGTGAATCAT
GGGTCTACTCGACATCGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: DNA Uptake Protein; ComEA-Related Signal Peptide Protein; Helix-Hairpin-Helix Motif Protein; Competence Protein ComEA Helix-Hairpin-Helix Region; DNA Uptake Protein ComEA-Like; Helix-Turn-Helix Protein; ComE Protein

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MLERDARLAPRAGFVPTATHPFHQKGAPAMLKKLLMLVVALSLSLTAALAAAVEVNTADQAALESVKGLGPVKSKAIIDE
RAKNGPFKDADDLANRVKGLGAKSVAHLEAAGLTIGGSTTPPTGAKAKTGTAKPAATATPAPAPAPAPTTSSATPAPSAA
TPAPATATPSTAASAPAAKKSRSSKKQDKAAAASAAAQASAPAAASTTKAKGSKKSRKNKAATPASAASGA

Sequences:

>Translated_231_residues
MLERDARLAPRAGFVPTATHPFHQKGAPAMLKKLLMLVVALSLSLTAALAAAVEVNTADQAALESVKGLGPVKSKAIIDE
RAKNGPFKDADDLANRVKGLGAKSVAHLEAAGLTIGGSTTPPTGAKAKTGTAKPAATATPAPAPAPAPTTSSATPAPSAA
TPAPATATPSTAASAPAAKKSRSSKKQDKAAAASAAAQASAPAAASTTKAKGSKKSRKNKAATPASAASGA
>Mature_231_residues
MLERDARLAPRAGFVPTATHPFHQKGAPAMLKKLLMLVVALSLSLTAALAAAVEVNTADQAALESVKGLGPVKSKAIIDE
RAKNGPFKDADDLANRVKGLGAKSVAHLEAAGLTIGGSTTPPTGAKAKTGTAKPAATATPAPAPAPAPTTSSATPAPSAA
TPAPATATPSTAASAPAAKKSRSSKKQDKAAAASAAAQASAPAAASTTKAKGSKKSRKNKAATPASAASGA

Specific function: Unknown

COG id: COG1555

COG function: function code L; DNA uptake protein and related DNA-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22434; Mature: 22434

Theoretical pI: Translated: 11.24; Mature: 11.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLERDARLAPRAGFVPTATHPFHQKGAPAMLKKLLMLVVALSLSLTAALAAAVEVNTADQ
CCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
AALESVKGLGPVKSKAIIDERAKNGPFKDADDLANRVKGLGAKSVAHLEAAGLTIGGSTT
HHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCEEECCCCC
PPTGAKAKTGTAKPAATATPAPAPAPAPTTSSATPAPSAATPAPATATPSTAASAPAAKK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHH
SRSSKKQDKAAAASAAAQASAPAAASTTKAKGSKKSRKNKAATPASAASGA
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MLERDARLAPRAGFVPTATHPFHQKGAPAMLKKLLMLVVALSLSLTAALAAAVEVNTADQ
CCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
AALESVKGLGPVKSKAIIDERAKNGPFKDADDLANRVKGLGAKSVAHLEAAGLTIGGSTT
HHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCEEECCCCC
PPTGAKAKTGTAKPAATATPAPAPAPAPTTSSATPAPSAATPAPATATPSTAASAPAAKK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHH
SRSSKKQDKAAAASAAAQASAPAAASTTKAKGSKKSRKNKAATPASAASGA
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA