Click here to switch to the map view.

The map label for this gene is yidB [H]

Identifier: 53719119

GI number: 53719119

Start: 1723606

End: 1724028

Strand: Reverse

Name: yidB [H]

Synonym: BPSL1485

Alternate gene names: 53719119

Gene position: 1724028-1723606 (Counterclockwise)

Preceding gene: 53719120

Following gene: 53719116

Centisome position: 42.31

GC content: 66.67

Gene sequence:

>423_bases
ATGGGTCTACTCGACATCGTTGGCGGTCTGATCGGCGGCCAAGGCGGCAACCAGAACGCGCTCGTCAGCGCCGCGCTGGA
GTTCATCAACAACCAGCCGGGTGGCCTGAATGGCCTCATCGAGAAATTCAACGCGGGCGGCGCGGGCGGCATCATCGGCT
CGTGGATCGGCACCGGGGAAAACCAGCCGATCTCGCCCGAGACGCTGCAGAACGTGCTCGGCTCGGATACGATCGGCGCG
CTCGCGCAGAAGGTCGGCATTGATCCGCAGCAGGCGTCGGGCATCCTCGCGCAAGTGCTGCCGCACGTCGTCAACGGCGC
GACGCCGAACGGCGAAGTGCCGGCGGGCGGCCAGCTCGATACGTCGAACGTGCTCGGCACGCTGTCGCAGCTCGCGAGCC
TGCTCGGTAACAAGCAGGCGTAA

Upstream 100 bases:

>100_bases
GTCCGCGGCATCGGGCGCATAAGTCGGGCGCCGCGCGACGCGCGGCTTCTTCGTTCCACCGGCGCCGTGCGCGGCGCCGC
CTCAACCTAGCAGGTGAATC

Downstream 100 bases:

>100_bases
CAACCGCGACGTGCCGCGCGGCAACGCGCGGCGGCGCAATGCGGCGAGGCGGTCGACGCACGCGCCGCCCGCATGCGCAA
GCGCAGCCGAACGCCGAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MGLLDIVGGLIGGQGGNQNALVSAALEFINNQPGGLNGLIEKFNAGGAGGIIGSWIGTGENQPISPETLQNVLGSDTIGA
LAQKVGIDPQQASGILAQVLPHVVNGATPNGEVPAGGQLDTSNVLGTLSQLASLLGNKQA

Sequences:

>Translated_140_residues
MGLLDIVGGLIGGQGGNQNALVSAALEFINNQPGGLNGLIEKFNAGGAGGIIGSWIGTGENQPISPETLQNVLGSDTIGA
LAQKVGIDPQQASGILAQVLPHVVNGATPNGEVPAGGQLDTSNVLGTLSQLASLLGNKQA
>Mature_139_residues
GLLDIVGGLIGGQGGNQNALVSAALEFINNQPGGLNGLIEKFNAGGAGGIIGSWIGTGENQPISPETLQNVLGSDTIGAL
AQKVGIDPQQASGILAQVLPHVVNGATPNGEVPAGGQLDTSNVLGTLSQLASLLGNKQA

Specific function: Unknown

COG id: COG3753

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082321, Length=115, Percent_Identity=37.3913043478261, Blast_Score=79, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009282 [H]

Pfam domain/function: PF06078 DUF937 [H]

EC number: NA

Molecular weight: Translated: 13786; Mature: 13655

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLLDIVGGLIGGQGGNQNALVSAALEFINNQPGGLNGLIEKFNAGGAGGIIGSWIGTGE
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHCCCC
NQPISPETLQNVLGSDTIGALAQKVGIDPQQASGILAQVLPHVVNGATPNGEVPAGGQLD
CCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
TSNVLGTLSQLASLLGNKQA
HHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GLLDIVGGLIGGQGGNQNALVSAALEFINNQPGGLNGLIEKFNAGGAGGIIGSWIGTGE
CHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHCCCC
NQPISPETLQNVLGSDTIGALAQKVGIDPQQASGILAQVLPHVVNGATPNGEVPAGGQLD
CCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
TSNVLGTLSQLASLLGNKQA
HHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3029692; 7686882; 9278503 [H]