| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718986
Identifier: 53718986
GI number: 53718986
Start: 1572506
End: 1573639
Strand: Reverse
Name: 53718986
Synonym: BPSL1347
Alternate gene names: NA
Gene position: 1573639-1572506 (Counterclockwise)
Preceding gene: 53718993
Following gene: 53718982
Centisome position: 38.62
GC content: 69.75
Gene sequence:
>1134_bases ATGAGCACCATCCTCGCCCCGCACTCGGGCGCCGCCCCCACCCTGCCGCTCATCGATAGCGGCCATCGCCGCCGCGGCTG GCGCGGCCGCCTGATCGCCAAGGCCGCCATGCAGATCCTGCGCCCCGTCGAACCGCGCGTGCAGCACGGACTGCCCGCGC CGACGACTTTTCCGCCGAACGGCGGCGCACGCCGGTTCGGCCTCGTCCATTACGGGATCATGATTCCGGATCTGCCCGCG CCGCACCGCTTCATGGCCACGGCGATCATCCTCGGCAGCGCGGGCATGCGCGTGTTCGACGCCGATTTCGCGGCGGCGCC GGGCGACGGCCCGCTGCAGACCGCGACGCTCGTGCACGGCACGGCGGCCGCCGTCGATCGCCATTTCACCCGCTACTCGA TTCCGCGCGATGTCGAATCGCGCGCGGACGGCAGCCTGCTGCGCCTTGGCGACGATCTGGAGCTGAGCGGCCGCTACCCA GAATTCCGCCTCGAGAGCCGCCGCGGCGGCTTCGCGGCCGATCTGACGCTCACCGCGACAGGCGACGTCACATGGTTCGC GAAAGGTCTCTTCTACGAACACATCGCGCTCGTCACCCGCTATCGGGGCACGATCGAGCACGGCGGCGCGACCACCGAAG TGGCGGGTCTGTGCACCTACGAATATGCGCGCGGCACGTCGCCCTACCTGCTGCGCAACCGTTTTCTGCCCCAAGCCGCG AAACTGCCATGGGACGTGTTCAGCTACCAGGTGATCGACCTCGACACCGACACGCAATTGCTGCTCGCGCACGTGCAAGT CGATCAGTATCCGGCGCTGACAAGCGCGTATCTGCGCGTCATCGGTCAACGCGCCCACCGGCTCGACGCCGACGTCCACT TCCGGGTGACGAGCACGCAGGCGCGGCCGGCCGTCGGGCCGGACGGCCACGCAATGTGGTTGCCCGAGACGTTCGCCTGG CGCGTGCGCGACCGGCGCGGCCGCACGCTGTTTGCGATCGATGCGACCGTCGATACGCCGATGCTGTTCGGCATCGGCAC GGGCTACGTCGGCGGCTATCGTTGGGAGGGCGAGCGCGACGGCCGCCCGGCGAGCGGGCGCGGGTACATCGAGTACGTCG ACCGGCGCAGATGA
Upstream 100 bases:
>100_bases CTGCCGCCGCATCGGCGAGCCGCCCGCCGTCGCGAAGCCGGCGGCGCGGCGCCGGCCGCGCGCCGCCGATGCCGCGCGCA AACGACAAACAGGAGACGAC
Downstream 100 bases:
>100_bases AGCGCCACGGCGACGCGCGCGCCGACGCCCGTCGCCGCGCCACGCCGGCGATCGCGGCGCGCGGCCGGCCGACGCCCGCG CGCCGCCGCGACGGGCGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MSTILAPHSGAAPTLPLIDSGHRRRGWRGRLIAKAAMQILRPVEPRVQHGLPAPTTFPPNGGARRFGLVHYGIMIPDLPA PHRFMATAIILGSAGMRVFDADFAAAPGDGPLQTATLVHGTAAAVDRHFTRYSIPRDVESRADGSLLRLGDDLELSGRYP EFRLESRRGGFAADLTLTATGDVTWFAKGLFYEHIALVTRYRGTIEHGGATTEVAGLCTYEYARGTSPYLLRNRFLPQAA KLPWDVFSYQVIDLDTDTQLLLAHVQVDQYPALTSAYLRVIGQRAHRLDADVHFRVTSTQARPAVGPDGHAMWLPETFAW RVRDRRGRTLFAIDATVDTPMLFGIGTGYVGGYRWEGERDGRPASGRGYIEYVDRRR
Sequences:
>Translated_377_residues MSTILAPHSGAAPTLPLIDSGHRRRGWRGRLIAKAAMQILRPVEPRVQHGLPAPTTFPPNGGARRFGLVHYGIMIPDLPA PHRFMATAIILGSAGMRVFDADFAAAPGDGPLQTATLVHGTAAAVDRHFTRYSIPRDVESRADGSLLRLGDDLELSGRYP EFRLESRRGGFAADLTLTATGDVTWFAKGLFYEHIALVTRYRGTIEHGGATTEVAGLCTYEYARGTSPYLLRNRFLPQAA KLPWDVFSYQVIDLDTDTQLLLAHVQVDQYPALTSAYLRVIGQRAHRLDADVHFRVTSTQARPAVGPDGHAMWLPETFAW RVRDRRGRTLFAIDATVDTPMLFGIGTGYVGGYRWEGERDGRPASGRGYIEYVDRRR >Mature_376_residues STILAPHSGAAPTLPLIDSGHRRRGWRGRLIAKAAMQILRPVEPRVQHGLPAPTTFPPNGGARRFGLVHYGIMIPDLPAP HRFMATAIILGSAGMRVFDADFAAAPGDGPLQTATLVHGTAAAVDRHFTRYSIPRDVESRADGSLLRLGDDLELSGRYPE FRLESRRGGFAADLTLTATGDVTWFAKGLFYEHIALVTRYRGTIEHGGATTEVAGLCTYEYARGTSPYLLRNRFLPQAAK LPWDVFSYQVIDLDTDTQLLLAHVQVDQYPALTSAYLRVIGQRAHRLDADVHFRVTSTQARPAVGPDGHAMWLPETFAWR VRDRRGRTLFAIDATVDTPMLFGIGTGYVGGYRWEGERDGRPASGRGYIEYVDRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41678; Mature: 41547
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTILAPHSGAAPTLPLIDSGHRRRGWRGRLIAKAAMQILRPVEPRVQHGLPAPTTFPPN CCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCC GGARRFGLVHYGIMIPDLPAPHRFMATAIILGSAGMRVFDADFAAAPGDGPLQTATLVHG CCCCEEEEEEEEEEECCCCCCHHHHHHHHEECCCCCEEEECCCCCCCCCCCCEEEEEECC TAAAVDRHFTRYSIPRDVESRADGSLLRLGDDLELSGRYPEFRLESRRGGFAADLTLTAT HHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCEECCCCCCEEEECCCCCEEEEEEEEEC GDVTWFAKGLFYEHIALVTRYRGTIEHGGATTEVAGLCTYEYARGTSPYLLRNRFLPQAA CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEHHHCCCCCHHHHHCCCCHHH KLPWDVFSYQVIDLDTDTQLLLAHVQVDQYPALTSAYLRVIGQRAHRLDADVHFRVTSTQ CCCCCHHEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCC ARPAVGPDGHAMWLPETFAWRVRDRRGRTLFAIDATVDTPMLFGIGTGYVGGYRWEGERD CCCCCCCCCCEEECCHHHEEEECCCCCCEEEEEECCCCCCEEEECCCCCCCCEEECCCCC GRPASGRGYIEYVDRRR CCCCCCCCHHHHHCCCC >Mature Secondary Structure STILAPHSGAAPTLPLIDSGHRRRGWRGRLIAKAAMQILRPVEPRVQHGLPAPTTFPPN CCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCC GGARRFGLVHYGIMIPDLPAPHRFMATAIILGSAGMRVFDADFAAAPGDGPLQTATLVHG CCCCEEEEEEEEEEECCCCCCHHHHHHHHEECCCCCEEEECCCCCCCCCCCCEEEEEECC TAAAVDRHFTRYSIPRDVESRADGSLLRLGDDLELSGRYPEFRLESRRGGFAADLTLTAT HHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCEECCCCCCEEEECCCCCEEEEEEEEEC GDVTWFAKGLFYEHIALVTRYRGTIEHGGATTEVAGLCTYEYARGTSPYLLRNRFLPQAA CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEHHHCCCCCHHHHHCCCCHHH KLPWDVFSYQVIDLDTDTQLLLAHVQVDQYPALTSAYLRVIGQRAHRLDADVHFRVTSTQ CCCCCHHEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCC ARPAVGPDGHAMWLPETFAWRVRDRRGRTLFAIDATVDTPMLFGIGTGYVGGYRWEGERD CCCCCCCCCCEEECCHHHEEEECCCCCCEEEEEECCCCCCEEEECCCCCCCCEEECCCCC GRPASGRGYIEYVDRRR CCCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA