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The map label for this gene is yafS [H]

Identifier: 53718982

GI number: 53718982

Start: 1567642

End: 1568454

Strand: Reverse

Name: yafS [H]

Synonym: BPSL1343

Alternate gene names: 53718982

Gene position: 1568454-1567642 (Counterclockwise)

Preceding gene: 53718986

Following gene: 53718981

Centisome position: 38.49

GC content: 69.0

Gene sequence:

>813_bases
ATGTCTGACCGTTCGATTATAGACTGGCCCGCCTGGACCGACTCCCCGCCCGGGCGCTATGTGCTTGGCTGGGAGCAGGC
GCAGCTCGACCGCACCGTGTCCGACGTGTTCGGCTTTCACGCGCTGCAGCTCGGGCTGCCGCAGCTCGACGCGCTGCGCG
AGAACCGCATGCCGTGCCGCGGCCTCGTGCTCGATCCGGCAAGCGGCGCGAGCGCGCCCTATCACTACCCGTGGGCGCGC
GAGGCGCGCAGCGCCGAGCACGCGCCCGCCGGGCGCAGCACCGTGTGGTGCGACCTGCTCGATCTGCCGTTCGAATCGCA
GAGCGTCGATCTGATCGTGATGCCGCACACGCTCGAATTCACGTCCGATCCGCACCGGCTGCTGCGCGAGGCCGAGCGCG
TGCTGATGCCGGAAGGCCAGCTCGTGATCACGGGCTTCAATTCGCTGAGCCTCTGGGGCGCGCGGCATTCGGTCGGCAAG
ATGGCGAAGCGCCCGTTCGTCCCCGCGACGCGCGACCAGATCACGTTCATCCGGCTGAAGGACTGGATCAAGCTGCTCGG
CTTCGATCTCGAGCGCGGCCGCTTCGGCTGCTACCGGCCGCCGCTCGCCACCGACAAGTGGCTGTCCCGCTACGCGTTCA
TGGAGGCGGCGGGCGACCGCTGGTGGCCGATCTTCGGCGCCGTCTACATGGTGACGGCGATCAAGCGCGTGCGCGGGATG
CGGCTCGTCGGCCCGATCAAGATGAAGAAGCCGGTGCTCGCGCCGGGCCTCACGCCCGCCGCCACCCCGACCACTCACCA
AGAACATTCATGA

Upstream 100 bases:

>100_bases
ACCGCCTGGCGGCCGTCCGACACGAGCCAGATGTAGTTGTCGTCGAATGCCGGCACCGGCACGTATTCCAGCTCGTTCAT
GGGCGCGCAATCACCGAGAT

Downstream 100 bases:

>100_bases
CGTTGCAAACCATCGACATCTATACCGACGGCGCCTGCAAGGGCAACCCCGGCCCGGGCGGCTGGGGCGCGCTGCTGCGC
TACGGCGCGCAGGAGAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MSDRSIIDWPAWTDSPPGRYVLGWEQAQLDRTVSDVFGFHALQLGLPQLDALRENRMPCRGLVLDPASGASAPYHYPWAR
EARSAEHAPAGRSTVWCDLLDLPFESQSVDLIVMPHTLEFTSDPHRLLREAERVLMPEGQLVITGFNSLSLWGARHSVGK
MAKRPFVPATRDQITFIRLKDWIKLLGFDLERGRFGCYRPPLATDKWLSRYAFMEAAGDRWWPIFGAVYMVTAIKRVRGM
RLVGPIKMKKPVLAPGLTPAATPTTHQEHS

Sequences:

>Translated_270_residues
MSDRSIIDWPAWTDSPPGRYVLGWEQAQLDRTVSDVFGFHALQLGLPQLDALRENRMPCRGLVLDPASGASAPYHYPWAR
EARSAEHAPAGRSTVWCDLLDLPFESQSVDLIVMPHTLEFTSDPHRLLREAERVLMPEGQLVITGFNSLSLWGARHSVGK
MAKRPFVPATRDQITFIRLKDWIKLLGFDLERGRFGCYRPPLATDKWLSRYAFMEAAGDRWWPIFGAVYMVTAIKRVRGM
RLVGPIKMKKPVLAPGLTPAATPTTHQEHS
>Mature_269_residues
SDRSIIDWPAWTDSPPGRYVLGWEQAQLDRTVSDVFGFHALQLGLPQLDALRENRMPCRGLVLDPASGASAPYHYPWARE
ARSAEHAPAGRSTVWCDLLDLPFESQSVDLIVMPHTLEFTSDPHRLLREAERVLMPEGQLVITGFNSLSLWGARHSVGKM
AKRPFVPATRDQITFIRLKDWIKLLGFDLERGRFGCYRPPLATDKWLSRYAFMEAAGDRWWPIFGAVYMVTAIKRVRGMR
LVGPIKMKKPVLAPGLTPAATPTTHQEHS

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081700, Length=248, Percent_Identity=30.6451612903226, Blast_Score=90, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 30515; Mature: 30383

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDRSIIDWPAWTDSPPGRYVLGWEQAQLDRTVSDVFGFHALQLGLPQLDALRENRMPCR
CCCCCEEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC
GLVLDPASGASAPYHYPWAREARSAEHAPAGRSTVWCDLLDLPFESQSVDLIVMPHTLEF
EEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCEECC
TSDPHRLLREAERVLMPEGQLVITGFNSLSLWGARHSVGKMAKRPFVPATRDQITFIRLK
CCCHHHHHHHHHHHCCCCCCEEEEECCCEEECCCHHHHHHHHHCCCCCCCCCCEEEEHHH
DWIKLLGFDLERGRFGCYRPPLATDKWLSRYAFMEAAGDRWWPIFGAVYMVTAIKRVRGM
HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
RLVGPIKMKKPVLAPGLTPAATPTTHQEHS
EEECCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SDRSIIDWPAWTDSPPGRYVLGWEQAQLDRTVSDVFGFHALQLGLPQLDALRENRMPCR
CCCCEEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC
GLVLDPASGASAPYHYPWAREARSAEHAPAGRSTVWCDLLDLPFESQSVDLIVMPHTLEF
EEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCEECC
TSDPHRLLREAERVLMPEGQLVITGFNSLSLWGARHSVGKMAKRPFVPATRDQITFIRLK
CCCHHHHHHHHHHHCCCCCCEEEEECCCEEECCCHHHHHHHHHCCCCCCCCCCEEEEHHH
DWIKLLGFDLERGRFGCYRPPLATDKWLSRYAFMEAAGDRWWPIFGAVYMVTAIKRVRGM
HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
RLVGPIKMKKPVLAPGLTPAATPTTHQEHS
EEECCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]