| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718905
Identifier: 53718905
GI number: 53718905
Start: 1472111
End: 1474072
Strand: Reverse
Name: 53718905
Synonym: BPSL1270
Alternate gene names: NA
Gene position: 1474072-1472111 (Counterclockwise)
Preceding gene: 53718909
Following gene: 53718904
Centisome position: 36.18
GC content: 68.25
Gene sequence:
>1962_bases ATGCCCGCGCTGCCCAATCCCTCCCGCCGCCATGCCCTGAAGATCCTCGCCGGCGCGCCGATGCTGCCGCTGTCCGGCGT CGCGCTGCCCGCCCTGCTGTCCGGCTGCGGCGGCGACGACGATGTCGCCGCCGCGCCGCCCGCCGCCGGCTTCGCGGCGG CCGCGTTCGCGTCGATGGCCGCGCCGACGCTCGCCGACCCGGCCGCGATGGCGACGACGACCGTCGGCTCGACGCTGTCG GTCTCGTTTACCGACGGCTCGACGCGCAACTACAAGCTCGCATACCGGCCGTTCTTCGTGACGGGCGACCGTGTGCCGGA CGGCAAGGGCGGCACGATCCTCGCGGGCGGCTACTACGACATCAACGGCCAGCCGATCATCGACCGCTCGGTTCCGGGCC AGGAGCGCCAGTTCTATTCCGACTGCCCGGACGGCAGCTCGCTGCTCACGCTGAAGAACGCGAACGTCGCGGGCGTGAAA GGCAACACGGTGTTTGCCGTCGTGCAGTTCGAATACACGACGCGCGATCTGGCGAGCGCATCGCAATACGGCCGGCTGCC GTCGCCGATCGCCGTGCTCACGCTCGACCAGGATCCGGCCACCGGCGCGCTCAAGCTCGTCAAGTATCACAACGTCGACA CGTCGGCCGCGCACGGCCTGTGGATCACGTGCGGCGCGAGCCTGTCGCCGTGGAACACGCACCTGTCGAGCGAGGAATAC GAGCCGGACGCGACGAAGGCCGCGGGCGACGCGCAGTTCAGGGCGTTCAGCAAGAACACGTTCGGCAGCGAGACGGCCGC GAACCCCTATCACTACGGCCATCTGCCTGAAATCACGGTGAACCCGGACGGCACGGGCTCGGTGCGCAAGCACTACTGCC TCGGGCGGATCTCGCACGAGCTCGTGCAGGTGATGCCGGACCAGCGCACCGTGCTGATGGGCGACGACGCGACGAACGGC GGCCTCTTCATGTTCATCGCGGACAAGGCGGCCGACCTGTCGGCGGGCACGCTGTACGTCGCGAAATGGGCGCAGACGTC GTCGGCGGGCGCGGGCGCCGCGACGCTCACGTGGCTCAATCTCGGCCACGCGACGAGCGCGGAGATCGAGGCGCTCGCGA ACCAGCTGAAGGCGGCCGACATCATGGACGTCGCGACGAAGGATCCGGGCGACGCGTCGTTCACCAAGATCAACTTCAGC GGCACGTTCAACTGGATCCGCATCAAGCCCGGCATGACGAAAGCCGCCGCGTTCCTCGAGACGCACCGCTACGCCGCGTA CGCGGGCGGCAGCATGGGCTTCACGAAGCTCGAGGGCACGACGGTCAACGCGAAGGACAAGGTGCTGTATTCGGCGATGT CGTACATCCAGAAATCGATGGTTCGCGGCAACGCGGCCGCGTCGCCGGACATCGCGCTCGATCGCGCGATCAACGCGGGT GCGGTCTACGCGCTCAACCTGCGCGGCGGCCAGCGCGACACGTCGGGCGCCGCGATCGCGAGCGAGTGGGTGCCCGTCGA CATGAGCGCGCCCGCCGCGCTCGTCGGCGAGGATCTCGCCGCGGCCGACGCGCTCGGCAACACCGCGCATCCGGACAAGA TCGCGAATCCGGACAACCTGAAATTCTCGGAAAAGCTGCGCACCCTCTTCATCGGCGAGGATTCGGGGATGCACGTGAAC AACTTCCTGTGGGCGTACAACGTCGACACCCAGCGCCTCTCGCGCGTGCTGTCGTGCCCGGCGGGTGCCGAATCGACTGG CCTGCACGCGGTCGACGAGATCAACGGCTGGACCTACGTGATGAGCAACTTCCAGCACGTCGGCGACTGGGAATCGCCGC TGCACGACAAGGTGAAGGGCGTGCTCGATCCGCTCGTGCGCGCGAACTACAAGGACCGCTTCGGCGCGAGCGTCGGCTAT CTGACGGCCGAGCCCGCCGCGATCCAGCTCAAGAAGGCGTAA
Upstream 100 bases:
>100_bases TTTCATTTACAAAAACTAAACTTTCACTCGATTTTCATCGCCGTCCGCGCCCGCTGCCGGTGCGGCGGCTTTTCCGTCGC CCACAACAACTGGATTTCCC
Downstream 100 bases:
>100_bases TACCGGAATTTCTTCGCCGTCACGGCTGATTCGCCGGCGCCTGGCGCCGGATTGGCGCGATGCCCTCGTGGTGTCGCGCT TTTTTTATGCGCGTTCGGCG
Product: putative exported alkaline phosphatase
Products: NA
Alternate protein names: Phosphatase; Exported Alkaline Phosphatase; Phosphatase-Like Protein; Cell Surface Protein; Twin-Arginine Translocation Pathway Signal; Phosphatase Or Zinc Metalloprotease With Signal Peptide; PKD Domain Protein; Lipoprotein
Number of amino acids: Translated: 653; Mature: 652
Protein sequence:
>653_residues MPALPNPSRRHALKILAGAPMLPLSGVALPALLSGCGGDDDVAAAPPAAGFAAAAFASMAAPTLADPAAMATTTVGSTLS VSFTDGSTRNYKLAYRPFFVTGDRVPDGKGGTILAGGYYDINGQPIIDRSVPGQERQFYSDCPDGSSLLTLKNANVAGVK GNTVFAVVQFEYTTRDLASASQYGRLPSPIAVLTLDQDPATGALKLVKYHNVDTSAAHGLWITCGASLSPWNTHLSSEEY EPDATKAAGDAQFRAFSKNTFGSETAANPYHYGHLPEITVNPDGTGSVRKHYCLGRISHELVQVMPDQRTVLMGDDATNG GLFMFIADKAADLSAGTLYVAKWAQTSSAGAGAATLTWLNLGHATSAEIEALANQLKAADIMDVATKDPGDASFTKINFS GTFNWIRIKPGMTKAAAFLETHRYAAYAGGSMGFTKLEGTTVNAKDKVLYSAMSYIQKSMVRGNAAASPDIALDRAINAG AVYALNLRGGQRDTSGAAIASEWVPVDMSAPAALVGEDLAAADALGNTAHPDKIANPDNLKFSEKLRTLFIGEDSGMHVN NFLWAYNVDTQRLSRVLSCPAGAESTGLHAVDEINGWTYVMSNFQHVGDWESPLHDKVKGVLDPLVRANYKDRFGASVGY LTAEPAAIQLKKA
Sequences:
>Translated_653_residues MPALPNPSRRHALKILAGAPMLPLSGVALPALLSGCGGDDDVAAAPPAAGFAAAAFASMAAPTLADPAAMATTTVGSTLS VSFTDGSTRNYKLAYRPFFVTGDRVPDGKGGTILAGGYYDINGQPIIDRSVPGQERQFYSDCPDGSSLLTLKNANVAGVK GNTVFAVVQFEYTTRDLASASQYGRLPSPIAVLTLDQDPATGALKLVKYHNVDTSAAHGLWITCGASLSPWNTHLSSEEY EPDATKAAGDAQFRAFSKNTFGSETAANPYHYGHLPEITVNPDGTGSVRKHYCLGRISHELVQVMPDQRTVLMGDDATNG GLFMFIADKAADLSAGTLYVAKWAQTSSAGAGAATLTWLNLGHATSAEIEALANQLKAADIMDVATKDPGDASFTKINFS GTFNWIRIKPGMTKAAAFLETHRYAAYAGGSMGFTKLEGTTVNAKDKVLYSAMSYIQKSMVRGNAAASPDIALDRAINAG AVYALNLRGGQRDTSGAAIASEWVPVDMSAPAALVGEDLAAADALGNTAHPDKIANPDNLKFSEKLRTLFIGEDSGMHVN NFLWAYNVDTQRLSRVLSCPAGAESTGLHAVDEINGWTYVMSNFQHVGDWESPLHDKVKGVLDPLVRANYKDRFGASVGY LTAEPAAIQLKKA >Mature_652_residues PALPNPSRRHALKILAGAPMLPLSGVALPALLSGCGGDDDVAAAPPAAGFAAAAFASMAAPTLADPAAMATTTVGSTLSV SFTDGSTRNYKLAYRPFFVTGDRVPDGKGGTILAGGYYDINGQPIIDRSVPGQERQFYSDCPDGSSLLTLKNANVAGVKG NTVFAVVQFEYTTRDLASASQYGRLPSPIAVLTLDQDPATGALKLVKYHNVDTSAAHGLWITCGASLSPWNTHLSSEEYE PDATKAAGDAQFRAFSKNTFGSETAANPYHYGHLPEITVNPDGTGSVRKHYCLGRISHELVQVMPDQRTVLMGDDATNGG LFMFIADKAADLSAGTLYVAKWAQTSSAGAGAATLTWLNLGHATSAEIEALANQLKAADIMDVATKDPGDASFTKINFSG TFNWIRIKPGMTKAAAFLETHRYAAYAGGSMGFTKLEGTTVNAKDKVLYSAMSYIQKSMVRGNAAASPDIALDRAINAGA VYALNLRGGQRDTSGAAIASEWVPVDMSAPAALVGEDLAAADALGNTAHPDKIANPDNLKFSEKLRTLFIGEDSGMHVNN FLWAYNVDTQRLSRVLSCPAGAESTGLHAVDEINGWTYVMSNFQHVGDWESPLHDKVKGVLDPLVRANYKDRFGASVGYL TAEPAAIQLKKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68842; Mature: 68711
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPALPNPSRRHALKILAGAPMLPLSGVALPALLSGCGGDDDVAAAPPAAGFAAAAFASMA CCCCCCCCHHHHEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHC APTLADPAAMATTTVGSTLSVSFTDGSTRNYKLAYRPFFVTGDRVPDGKGGTILAGGYYD CCCCCCCHHHHHEECCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCCEEEECCEEE INGQPIIDRSVPGQERQFYSDCPDGSSLLTLKNANVAGVKGNTVFAVVQFEYTTRDLASA CCCCEEECCCCCCCHHHHHHCCCCCCCEEEEECCCEEEECCCEEEEEEEEEECHHHHHHH SQYGRLPSPIAVLTLDQDPATGALKLVKYHNVDTSAAHGLWITCGASLSPWNTHLSSEEY HHCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCC EPDATKAAGDAQFRAFSKNTFGSETAANPYHYGHLPEITVNPDGTGSVRKHYCLGRISHE CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHH LVQVMPDQRTVLMGDDATNGGLFMFIADKAADLSAGTLYVAKWAQTSSAGAGAATLTWLN HHHHCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEE LGHATSAEIEALANQLKAADIMDVATKDPGDASFTKINFSGTFNWIRIKPGMTKAAAFLE CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEEEEECCCCHHHHHHHH THRYAAYAGGSMGFTKLEGTTVNAKDKVLYSAMSYIQKSMVRGNAAASPDIALDRAINAG HHHHEEECCCCCCEEEECCCEECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCC AVYALNLRGGQRDTSGAAIASEWVPVDMSAPAALVGEDLAAADALGNTAHPDKIANPDNL EEEEEEECCCCCCCCCCEEECCCEEECCCCCHHHHCCHHHHHHHCCCCCCCCCCCCCCCC KFSEKLRTLFIGEDSGMHVNNFLWAYNVDTQRLSRVLSCPAGAESTGLHAVDEINGWTYV CHHHCEEEEEEECCCCCEEEEEEEEEECCHHHHHHHHCCCCCCCCCCCEEHHHCCCEEEE MSNFQHVGDWESPLHDKVKGVLDPLVRANYKDRFGASVGYLTAEPAAIQLKKA ECCCHHCCCCCCHHHHHHHHHHHHHHHCCCCHHCCCCCCEEECCCCEEEEECC >Mature Secondary Structure PALPNPSRRHALKILAGAPMLPLSGVALPALLSGCGGDDDVAAAPPAAGFAAAAFASMA CCCCCCCHHHHEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHC APTLADPAAMATTTVGSTLSVSFTDGSTRNYKLAYRPFFVTGDRVPDGKGGTILAGGYYD CCCCCCCHHHHHEECCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCCEEEECCEEE INGQPIIDRSVPGQERQFYSDCPDGSSLLTLKNANVAGVKGNTVFAVVQFEYTTRDLASA CCCCEEECCCCCCCHHHHHHCCCCCCCEEEEECCCEEEECCCEEEEEEEEEECHHHHHHH SQYGRLPSPIAVLTLDQDPATGALKLVKYHNVDTSAAHGLWITCGASLSPWNTHLSSEEY HHCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCC EPDATKAAGDAQFRAFSKNTFGSETAANPYHYGHLPEITVNPDGTGSVRKHYCLGRISHE CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHH LVQVMPDQRTVLMGDDATNGGLFMFIADKAADLSAGTLYVAKWAQTSSAGAGAATLTWLN HHHHCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEE LGHATSAEIEALANQLKAADIMDVATKDPGDASFTKINFSGTFNWIRIKPGMTKAAAFLE CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEEEEECCCCHHHHHHHH THRYAAYAGGSMGFTKLEGTTVNAKDKVLYSAMSYIQKSMVRGNAAASPDIALDRAINAG HHHHEEECCCCCCEEEECCCEECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCC AVYALNLRGGQRDTSGAAIASEWVPVDMSAPAALVGEDLAAADALGNTAHPDKIANPDNL EEEEEEECCCCCCCCCCEEECCCEEECCCCCHHHHCCHHHHHHHCCCCCCCCCCCCCCCC KFSEKLRTLFIGEDSGMHVNNFLWAYNVDTQRLSRVLSCPAGAESTGLHAVDEINGWTYV CHHHCEEEEEEECCCCCEEEEEEEEEECCHHHHHHHHCCCCCCCCCCCEEHHHCCCEEEE MSNFQHVGDWESPLHDKVKGVLDPLVRANYKDRFGASVGYLTAEPAAIQLKKA ECCCHHCCCCCCHHHHHHHHHHHHHHHCCCCHHCCCCCCEEECCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA