| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718909
Identifier: 53718909
GI number: 53718909
Start: 1477083
End: 1477739
Strand: Reverse
Name: 53718909
Synonym: BPSL1274
Alternate gene names: NA
Gene position: 1477739-1477083 (Counterclockwise)
Preceding gene: 53718911
Following gene: 53718905
Centisome position: 36.27
GC content: 74.43
Gene sequence:
>657_bases ATGAACCACGCCGCCTCCTCCCTCCCGCACGCGCCGGATCCGCACCCGAAGCCGCGCGAGCGCGCGCCGTCGGCGCCGTG TCGCGACCGCGCCACGCCGGCGTCGACGCCGATCGCGCGTTTTTGCACACGGCTCGACGCCGCATTCGATTCGCTCCGCG ACGAGACCGCGCCGTCGCGGCATCCGGCGTTCGCGCGAGCGCTGCGCGCCGCGCTCGCCGAGGCCGCCGCCGCACCGGGC CTCCTCACGCCCGCTCAGCGGGAGAGCGGCGCGGCGGGCTACCGCCGCCATCTGCTCGCCGCCGATCCGGCCGGCCGCTA TGCGGTCGTGTCGCTCGTCTGGGAGCCGGGCCAATGGAGCCCGGTTCACGGCCATCATGCATGGTGTGGCTACGCGGTGC TGGAAGGCAAGCTCACCGAGATCGTCTATCGCTGGAGCGACGCGGCCTGCTGCGCGATCGACGCGCGCAGACGCGCGCGG CCGATGGGCGCCGTGTCGTACGTGTGCGCGGGGCGTGACGCGATCCACCGGCTGGGCCACGCGGGCGCGAAAACCGATGC GCCGGCGATCTCGCTGCACGTGTACGGCGTCGCGGGCGAGCAGGTGGCGACGCACGTGAACGACGTCGTCGCGGTCGACG CGCGCGCGTACGCATGA
Upstream 100 bases:
>100_bases ATGAGGGAACAATATGGAATCCGTTTCTCCAAGTCGACCGGTATAAATACGTACCGAACCCGTGCAACGTCGCCGCGGGC CATGAACGACCGAGTCAACG
Downstream 100 bases:
>100_bases GCATGCCCGCCGACGCACGCGCGTGCGTCGCGATCAGCAACGGTTCGACGCGCCGGCGTTCGCGGCGTCACCCGAGCGAT CGGGTCCGGGCCTGTCCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Cysteine Dioxygenase Type I Family Protein; Metal-Dependent Protein
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MNHAASSLPHAPDPHPKPRERAPSAPCRDRATPASTPIARFCTRLDAAFDSLRDETAPSRHPAFARALRAALAEAAAAPG LLTPAQRESGAAGYRRHLLAADPAGRYAVVSLVWEPGQWSPVHGHHAWCGYAVLEGKLTEIVYRWSDAACCAIDARRRAR PMGAVSYVCAGRDAIHRLGHAGAKTDAPAISLHVYGVAGEQVATHVNDVVAVDARAYA
Sequences:
>Translated_218_residues MNHAASSLPHAPDPHPKPRERAPSAPCRDRATPASTPIARFCTRLDAAFDSLRDETAPSRHPAFARALRAALAEAAAAPG LLTPAQRESGAAGYRRHLLAADPAGRYAVVSLVWEPGQWSPVHGHHAWCGYAVLEGKLTEIVYRWSDAACCAIDARRRAR PMGAVSYVCAGRDAIHRLGHAGAKTDAPAISLHVYGVAGEQVATHVNDVVAVDARAYA >Mature_218_residues MNHAASSLPHAPDPHPKPRERAPSAPCRDRATPASTPIARFCTRLDAAFDSLRDETAPSRHPAFARALRAALAEAAAAPG LLTPAQRESGAAGYRRHLLAADPAGRYAVVSLVWEPGQWSPVHGHHAWCGYAVLEGKLTEIVYRWSDAACCAIDARRRAR PMGAVSYVCAGRDAIHRLGHAGAKTDAPAISLHVYGVAGEQVATHVNDVVAVDARAYA
Specific function: Unknown
COG id: COG5553
COG function: function code R; Predicted metal-dependent enzyme of the double-stranded beta helix superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23170; Mature: 23170
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHAASSLPHAPDPHPKPRERAPSAPCRDRATPASTPIARFCTRLDAAFDSLRDETAPSR CCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC HPAFARALRAALAEAAAAPGLLTPAQRESGAAGYRRHLLAADPAGRYAVVSLVWEPGQWS CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCC PVHGHHAWCGYAVLEGKLTEIVYRWSDAACCAIDARRRARPMGAVSYVCAGRDAIHRLGH CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHCCCCHHHHHHHCCHHHHHHHHC AGAKTDAPAISLHVYGVAGEQVATHVNDVVAVDARAYA CCCCCCCCEEEEEEEECCHHHHHHHHHHHEEECCHHCC >Mature Secondary Structure MNHAASSLPHAPDPHPKPRERAPSAPCRDRATPASTPIARFCTRLDAAFDSLRDETAPSR CCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC HPAFARALRAALAEAAAAPGLLTPAQRESGAAGYRRHLLAADPAGRYAVVSLVWEPGQWS CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCC PVHGHHAWCGYAVLEGKLTEIVYRWSDAACCAIDARRRARPMGAVSYVCAGRDAIHRLGH CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHCCCCHHHHHHHCCHHHHHHHHC AGAKTDAPAISLHVYGVAGEQVATHVNDVVAVDARAYA CCCCCCCCEEEEEEEECCHHHHHHHHHHHEEECCHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA