Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

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The map label for this gene is 53718840

Identifier: 53718840

GI number: 53718840

Start: 1389014

End: 1389514

Strand: Reverse

Name: 53718840

Synonym: BPSL1204

Alternate gene names: NA

Gene position: 1389514-1389014 (Counterclockwise)

Preceding gene: 53718869

Following gene: 53718839

Centisome position: 34.1

GC content: 64.47

Gene sequence:

>501_bases
ATGTTCGCTCGTCTGCCGGTTCTGTTCGCTTGCGCGGCGGCGCTGCTCGCCGGCTGCGCCCAGCCGTGGCAGCAATTTCA
CGCCGGAGACGATTCTTCGGCGATCGTCGCCCGGCTGGGGCCGCCGCGCGAAATCTACGATCTGCCGAACGGCGGCAAGC
GCCTGATGTGGCCGACCCAGCCGATGGGCGAAGTCACGACGGCCGCCGACATCGATGCGCACGACCGGATCGTCAGCGTG
CGGCAAGTGTTGCAGCCGCTCGAGTTCTACCGCGCCGAGATCGGCAAGTGGACCAAGACCGACGTGCTCGTGAACTTCGG
CCGCCCTGTCGAGACATCGTACTTTCCGCTGATGAAGCGCGAAGTGTGGACGTACCGCTATCTCGAAGACAACGTCTGGT
ACATGCTCTACAGCTTCTACTTCGACGACGACGGCATCCTGCGGCTCACGCAGAAGACGCCCGATCCGCTGCACGACCCC
GATCGCCGCACGCTGTTCTGA

Upstream 100 bases:

>100_bases
CGGCATATGAATGCCGCGGCGCAAACTTTTCCGAACCGGCACGCGCACGCGGCCGCGCGCCGTGATAAAACGTCGCCATT
CCCGCCTCATGGAGAAACGC

Downstream 100 bases:

>100_bases
CTCCCGCCGCCGGCCTGCCGGCCGGCGCATTCCCCCGCCGTTCGCCCGAAGTCATTTGACACGCCGTTTTCTAAAATGAC
TTTTTTATCATTTTCCCATT

Product: putative lipoprotein

Products: NA

Alternate protein names: Lipoprotein Transmembrane; Transmembrane Protein; Transmembrane Lipoprotein; Exported Protein

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MFARLPVLFACAAALLAGCAQPWQQFHAGDDSSAIVARLGPPREIYDLPNGGKRLMWPTQPMGEVTTAADIDAHDRIVSV
RQVLQPLEFYRAEIGKWTKTDVLVNFGRPVETSYFPLMKREVWTYRYLEDNVWYMLYSFYFDDDGILRLTQKTPDPLHDP
DRRTLF

Sequences:

>Translated_166_residues
MFARLPVLFACAAALLAGCAQPWQQFHAGDDSSAIVARLGPPREIYDLPNGGKRLMWPTQPMGEVTTAADIDAHDRIVSV
RQVLQPLEFYRAEIGKWTKTDVLVNFGRPVETSYFPLMKREVWTYRYLEDNVWYMLYSFYFDDDGILRLTQKTPDPLHDP
DRRTLF
>Mature_166_residues
MFARLPVLFACAAALLAGCAQPWQQFHAGDDSSAIVARLGPPREIYDLPNGGKRLMWPTQPMGEVTTAADIDAHDRIVSV
RQVLQPLEFYRAEIGKWTKTDVLVNFGRPVETSYFPLMKREVWTYRYLEDNVWYMLYSFYFDDDGILRLTQKTPDPLHDP
DRRTLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19189; Mature: 19189

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFARLPVLFACAAALLAGCAQPWQQFHAGDDSSAIVARLGPPREIYDLPNGGKRLMWPTQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHEEECCCCCCEEECCCC
PMGEVTTAADIDAHDRIVSVRQVLQPLEFYRAEIGKWTKTDVLVNFGRPVETSYFPLMKR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHH
EVWTYRYLEDNVWYMLYSFYFDDDGILRLTQKTPDPLHDPDRRTLF
HHHHHEEHHCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFARLPVLFACAAALLAGCAQPWQQFHAGDDSSAIVARLGPPREIYDLPNGGKRLMWPTQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHEEECCCCCCEEECCCC
PMGEVTTAADIDAHDRIVSVRQVLQPLEFYRAEIGKWTKTDVLVNFGRPVETSYFPLMKR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHH
EVWTYRYLEDNVWYMLYSFYFDDDGILRLTQKTPDPLHDPDRRTLF
HHHHHEEHHCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA