| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
Click here to switch to the map view.
The map label for this gene is 53718840
Identifier: 53718840
GI number: 53718840
Start: 1389014
End: 1389514
Strand: Reverse
Name: 53718840
Synonym: BPSL1204
Alternate gene names: NA
Gene position: 1389514-1389014 (Counterclockwise)
Preceding gene: 53718869
Following gene: 53718839
Centisome position: 34.1
GC content: 64.47
Gene sequence:
>501_bases ATGTTCGCTCGTCTGCCGGTTCTGTTCGCTTGCGCGGCGGCGCTGCTCGCCGGCTGCGCCCAGCCGTGGCAGCAATTTCA CGCCGGAGACGATTCTTCGGCGATCGTCGCCCGGCTGGGGCCGCCGCGCGAAATCTACGATCTGCCGAACGGCGGCAAGC GCCTGATGTGGCCGACCCAGCCGATGGGCGAAGTCACGACGGCCGCCGACATCGATGCGCACGACCGGATCGTCAGCGTG CGGCAAGTGTTGCAGCCGCTCGAGTTCTACCGCGCCGAGATCGGCAAGTGGACCAAGACCGACGTGCTCGTGAACTTCGG CCGCCCTGTCGAGACATCGTACTTTCCGCTGATGAAGCGCGAAGTGTGGACGTACCGCTATCTCGAAGACAACGTCTGGT ACATGCTCTACAGCTTCTACTTCGACGACGACGGCATCCTGCGGCTCACGCAGAAGACGCCCGATCCGCTGCACGACCCC GATCGCCGCACGCTGTTCTGA
Upstream 100 bases:
>100_bases CGGCATATGAATGCCGCGGCGCAAACTTTTCCGAACCGGCACGCGCACGCGGCCGCGCGCCGTGATAAAACGTCGCCATT CCCGCCTCATGGAGAAACGC
Downstream 100 bases:
>100_bases CTCCCGCCGCCGGCCTGCCGGCCGGCGCATTCCCCCGCCGTTCGCCCGAAGTCATTTGACACGCCGTTTTCTAAAATGAC TTTTTTATCATTTTCCCATT
Product: putative lipoprotein
Products: NA
Alternate protein names: Lipoprotein Transmembrane; Transmembrane Protein; Transmembrane Lipoprotein; Exported Protein
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MFARLPVLFACAAALLAGCAQPWQQFHAGDDSSAIVARLGPPREIYDLPNGGKRLMWPTQPMGEVTTAADIDAHDRIVSV RQVLQPLEFYRAEIGKWTKTDVLVNFGRPVETSYFPLMKREVWTYRYLEDNVWYMLYSFYFDDDGILRLTQKTPDPLHDP DRRTLF
Sequences:
>Translated_166_residues MFARLPVLFACAAALLAGCAQPWQQFHAGDDSSAIVARLGPPREIYDLPNGGKRLMWPTQPMGEVTTAADIDAHDRIVSV RQVLQPLEFYRAEIGKWTKTDVLVNFGRPVETSYFPLMKREVWTYRYLEDNVWYMLYSFYFDDDGILRLTQKTPDPLHDP DRRTLF >Mature_166_residues MFARLPVLFACAAALLAGCAQPWQQFHAGDDSSAIVARLGPPREIYDLPNGGKRLMWPTQPMGEVTTAADIDAHDRIVSV RQVLQPLEFYRAEIGKWTKTDVLVNFGRPVETSYFPLMKREVWTYRYLEDNVWYMLYSFYFDDDGILRLTQKTPDPLHDP DRRTLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19189; Mature: 19189
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFARLPVLFACAAALLAGCAQPWQQFHAGDDSSAIVARLGPPREIYDLPNGGKRLMWPTQ CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHEEECCCCCCEEECCCC PMGEVTTAADIDAHDRIVSVRQVLQPLEFYRAEIGKWTKTDVLVNFGRPVETSYFPLMKR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHH EVWTYRYLEDNVWYMLYSFYFDDDGILRLTQKTPDPLHDPDRRTLF HHHHHEEHHCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MFARLPVLFACAAALLAGCAQPWQQFHAGDDSSAIVARLGPPREIYDLPNGGKRLMWPTQ CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHEEECCCCCCEEECCCC PMGEVTTAADIDAHDRIVSVRQVLQPLEFYRAEIGKWTKTDVLVNFGRPVETSYFPLMKR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHH EVWTYRYLEDNVWYMLYSFYFDDDGILRLTQKTPDPLHDPDRRTLF HHHHHEEHHCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA