Click here to switch to the map view.

The map label for this gene is yngJ [H]

Identifier: 53718869

GI number: 53718869

Start: 1418190

End: 1419416

Strand: Reverse

Name: yngJ [H]

Synonym: BPSL1234

Alternate gene names: 53718869

Gene position: 1419416-1418190 (Counterclockwise)

Preceding gene: 53718870

Following gene: 53718840

Centisome position: 34.84

GC content: 68.7

Gene sequence:

>1227_bases
ATGCATTTCGACTACTCCGCGAAAGTGGAAGCGTTGCGAGCGCGGCTCGGCGCGTTCTTCGACGAGCACATCTATCCGAA
CGAGCGCGCGTTCTACGAAGAGATCGCGCGCAACCGGCGCGCGGGCGACGCATGGCGGCCGGTCGAGCTGATCGAGACGC
TGAAGGCGAAGGCGCGCGCCGCGGGCTTGTGGAACCTGTTCCTGCCGGACTCGGCGCGCGGCGCCGGCCTCACGAATCTC
GAATACGCACCGCTTTGCGAAATCATGGGCCGCGTGCCCTGGGCGCCCGAGGTCTTCAACTGCAACGCGCCCGACACCGG
CAACATGGAAACGCTTGAGCGCTACGGCACCGACGCGCACAAGGCGGCGTGGCTCGAACCGCTGCTCGACGGCGTGATCC
GCTCGGCATTCCTGATGACGGAGCCCGAAGTCGCGTCGTCGGACGCGACGAACATCCGCACCCGCATCGAGCGCGACGGC
GAGCACTACGTGATCAACGGCCACAAGTGGTGGTCCTCGGGCGCGGGCGATCCGCGCTGCAAGCTCTATATCGTGATGGG
CAAGACGGACCCCGACGCGCCCCGCCACGCGCAACAGTCAATGATGCTCGTGCCGTCGGACGCGCACGGCGTCACCGTGC
ATCGGCCGCTGAACGTGTTCGGCTACGACGACGCGCCGCACGGCCACATGGAGATCACGCTCGAGAACGTGCGCGTGCCC
GCGTCGAACCTGCTGCTCGGCGAGGGGCGCGGCTTCGAGATCGCGCAGGGCCGGCTCGGGCCGGGCCGCATCCATCATTG
CATGCGGCTCGTCGGGCTCGCGGAGCGCGCGCTCGAGCTGATGTGCCGCCGCGCGTCGGAGCGCATCGCGTTCGGCAAAC
CGGTCGCCGCGCAGACGGTCACGCAGGAGCGCATCGCCGAGGCGCGCTGCATGATCGAACAGGCGCGGCTGCTCACGCTG
AAGACCGCGTACATGATGGATACCGTCGGCAACAAGGGCGCGCGCGGCGAGATCGCGATGATCAAGGTGGTGGCGCCGAA
CATGGCGTGCCAGGTGATCGACTGGGCGATCCAGGCGCACGGCGGCGGCGGCGTCAGCGACGATTTCCCGCTCGCCTACG
CGTACGCGAGCGCGCGGACGCTGCGCTTCGCGGACGGACCGGACGAGGTCCATCGCAACGCGATCGCGAAACTCGAACTC
GCGCGTCACGCGCCGCGATCGGCCTGA

Upstream 100 bases:

>100_bases
CGGCGCGCGCGGCCGATGGCCGAGCTCGCGTGGCGCTATGCGCAGCATGCGCGCTAGCCGCGCGCGCCCCTCACCGAACC
GATCGACCAGCGAGGCAGCC

Downstream 100 bases:

>100_bases
CGCGCGCTTCGCGCCGGGAACGCCGGCGAAGGGCCGACGGGGCGCGCGCGGCCCGCGGCAATCGGCGCGATACAGCGACG
CTTCGCGTCTACGCCGGCAG

Product: putative acyl-CoA dehydrogenase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MHFDYSAKVEALRARLGAFFDEHIYPNERAFYEEIARNRRAGDAWRPVELIETLKAKARAAGLWNLFLPDSARGAGLTNL
EYAPLCEIMGRVPWAPEVFNCNAPDTGNMETLERYGTDAHKAAWLEPLLDGVIRSAFLMTEPEVASSDATNIRTRIERDG
EHYVINGHKWWSSGAGDPRCKLYIVMGKTDPDAPRHAQQSMMLVPSDAHGVTVHRPLNVFGYDDAPHGHMEITLENVRVP
ASNLLLGEGRGFEIAQGRLGPGRIHHCMRLVGLAERALELMCRRASERIAFGKPVAAQTVTQERIAEARCMIEQARLLTL
KTAYMMDTVGNKGARGEIAMIKVVAPNMACQVIDWAIQAHGGGGVSDDFPLAYAYASARTLRFADGPDEVHRNAIAKLEL
ARHAPRSA

Sequences:

>Translated_408_residues
MHFDYSAKVEALRARLGAFFDEHIYPNERAFYEEIARNRRAGDAWRPVELIETLKAKARAAGLWNLFLPDSARGAGLTNL
EYAPLCEIMGRVPWAPEVFNCNAPDTGNMETLERYGTDAHKAAWLEPLLDGVIRSAFLMTEPEVASSDATNIRTRIERDG
EHYVINGHKWWSSGAGDPRCKLYIVMGKTDPDAPRHAQQSMMLVPSDAHGVTVHRPLNVFGYDDAPHGHMEITLENVRVP
ASNLLLGEGRGFEIAQGRLGPGRIHHCMRLVGLAERALELMCRRASERIAFGKPVAAQTVTQERIAEARCMIEQARLLTL
KTAYMMDTVGNKGARGEIAMIKVVAPNMACQVIDWAIQAHGGGGVSDDFPLAYAYASARTLRFADGPDEVHRNAIAKLEL
ARHAPRSA
>Mature_408_residues
MHFDYSAKVEALRARLGAFFDEHIYPNERAFYEEIARNRRAGDAWRPVELIETLKAKARAAGLWNLFLPDSARGAGLTNL
EYAPLCEIMGRVPWAPEVFNCNAPDTGNMETLERYGTDAHKAAWLEPLLDGVIRSAFLMTEPEVASSDATNIRTRIERDG
EHYVINGHKWWSSGAGDPRCKLYIVMGKTDPDAPRHAQQSMMLVPSDAHGVTVHRPLNVFGYDDAPHGHMEITLENVRVP
ASNLLLGEGRGFEIAQGRLGPGRIHHCMRLVGLAERALELMCRRASERIAFGKPVAAQTVTQERIAEARCMIEQARLLTL
KTAYMMDTVGNKGARGEIAMIKVVAPNMACQVIDWAIQAHGGGGVSDDFPLAYAYASARTLRFADGPDEVHRNAIAKLEL
ARHAPRSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI211971008, Length=400, Percent_Identity=59.25, Blast_Score=474, Evalue=1e-134,
Organism=Homo sapiens, GI48976061, Length=400, Percent_Identity=59.25, Blast_Score=474, Evalue=1e-134,
Organism=Homo sapiens, GI38505218, Length=406, Percent_Identity=55.9113300492611, Blast_Score=459, Evalue=1e-129,
Organism=Homo sapiens, GI21361497, Length=395, Percent_Identity=29.620253164557, Blast_Score=145, Evalue=1e-34,
Organism=Homo sapiens, GI4501859, Length=336, Percent_Identity=29.7619047619048, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI187960098, Length=413, Percent_Identity=26.634382566586, Blast_Score=132, Evalue=5e-31,
Organism=Homo sapiens, GI4557231, Length=413, Percent_Identity=26.634382566586, Blast_Score=132, Evalue=5e-31,
Organism=Homo sapiens, GI4557233, Length=335, Percent_Identity=29.8507462686567, Blast_Score=126, Evalue=4e-29,
Organism=Homo sapiens, GI76496475, Length=393, Percent_Identity=28.498727735369, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI4557235, Length=393, Percent_Identity=28.498727735369, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI7656849, Length=353, Percent_Identity=24.929178470255, Blast_Score=106, Evalue=3e-23,
Organism=Homo sapiens, GI226958412, Length=390, Percent_Identity=25.3846153846154, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI226958414, Length=337, Percent_Identity=26.1127596439169, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI4501857, Length=405, Percent_Identity=25.679012345679, Blast_Score=96, Evalue=6e-20,
Organism=Escherichia coli, GI87081958, Length=306, Percent_Identity=29.7385620915033, Blast_Score=105, Evalue=6e-24,
Organism=Escherichia coli, GI1786223, Length=266, Percent_Identity=24.812030075188, Blast_Score=71, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17562446, Length=356, Percent_Identity=55.8988764044944, Blast_Score=404, Evalue=1e-113,
Organism=Caenorhabditis elegans, GI17534899, Length=412, Percent_Identity=26.9417475728155, Blast_Score=133, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI17569725, Length=412, Percent_Identity=26.9417475728155, Blast_Score=130, Evalue=9e-31,
Organism=Caenorhabditis elegans, GI71985184, Length=356, Percent_Identity=30.0561797752809, Blast_Score=121, Evalue=6e-28,
Organism=Caenorhabditis elegans, GI17570075, Length=413, Percent_Identity=26.3922518159806, Blast_Score=120, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI17533517, Length=350, Percent_Identity=27.4285714285714, Blast_Score=112, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI17506239, Length=284, Percent_Identity=29.9295774647887, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17508101, Length=337, Percent_Identity=26.7062314540059, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17551932, Length=297, Percent_Identity=28.956228956229, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17505929, Length=415, Percent_Identity=25.3012048192771, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17538396, Length=389, Percent_Identity=23.3933161953728, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71985192, Length=282, Percent_Identity=28.3687943262411, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71990804, Length=264, Percent_Identity=26.1363636363636, Blast_Score=81, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI32563615, Length=179, Percent_Identity=28.4916201117318, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17531909, Length=247, Percent_Identity=25.5060728744939, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71982178, Length=283, Percent_Identity=24.0282685512367, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24660351, Length=285, Percent_Identity=32.280701754386, Blast_Score=130, Evalue=2e-30,
Organism=Drosophila melanogaster, GI21356377, Length=345, Percent_Identity=29.5652173913043, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI281363737, Length=395, Percent_Identity=27.8481012658228, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI24646207, Length=336, Percent_Identity=29.7619047619048, Blast_Score=117, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24666513, Length=343, Percent_Identity=28.5714285714286, Blast_Score=113, Evalue=2e-25,
Organism=Drosophila melanogaster, GI21355753, Length=290, Percent_Identity=25.5172413793103, Blast_Score=84, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 45146; Mature: 45146

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFDYSAKVEALRARLGAFFDEHIYPNERAFYEEIARNRRAGDAWRPVELIETLKAKARA
CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
AGLWNLFLPDSARGAGLTNLEYAPLCEIMGRVPWAPEVFNCNAPDTGNMETLERYGTDAH
CCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHCCCHH
KAAWLEPLLDGVIRSAFLMTEPEVASSDATNIRTRIERDGEHYVINGHKWWSSGAGDPRC
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCEEEEECEEEECCCCCCCCE
KLYIVMGKTDPDAPRHAQQSMMLVPSDAHGVTVHRPLNVFGYDDAPHGHMEITLENVRVP
EEEEEEECCCCCCCHHHHHCEEEEECCCCCEEEECCCEEECCCCCCCCEEEEEEECEECC
ASNLLLGEGRGFEIAQGRLGPGRIHHCMRLVGLAERALELMCRRASERIAFGKPVAAQTV
HHHEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
TQERIAEARCMIEQARLLTLKTAYMMDTVGNKGARGEIAMIKVVAPNMACQVIDWAIQAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHEEEC
GGGGVSDDFPLAYAYASARTLRFADGPDEVHRNAIAKLELARHAPRSA
CCCCCCCCCCCEEEECCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MHFDYSAKVEALRARLGAFFDEHIYPNERAFYEEIARNRRAGDAWRPVELIETLKAKARA
CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
AGLWNLFLPDSARGAGLTNLEYAPLCEIMGRVPWAPEVFNCNAPDTGNMETLERYGTDAH
CCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHCCCHH
KAAWLEPLLDGVIRSAFLMTEPEVASSDATNIRTRIERDGEHYVINGHKWWSSGAGDPRC
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCEEEEECEEEECCCCCCCCE
KLYIVMGKTDPDAPRHAQQSMMLVPSDAHGVTVHRPLNVFGYDDAPHGHMEITLENVRVP
EEEEEEECCCCCCCHHHHHCEEEEECCCCCEEEECCCEEECCCCCCCCEEEEEEECEECC
ASNLLLGEGRGFEIAQGRLGPGRIHHCMRLVGLAERALELMCRRASERIAFGKPVAAQTV
HHHEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
TQERIAEARCMIEQARLLTLKTAYMMDTVGNKGARGEIAMIKVVAPNMACQVIDWAIQAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHEEEC
GGGGVSDDFPLAYAYASARTLRFADGPDEVHRNAIAKLELARHAPRSA
CCCCCCCCCCCEEEECCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]