| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is maf [C]
Identifier: 53718795
GI number: 53718795
Start: 1339113
End: 1339742
Strand: Reverse
Name: maf [C]
Synonym: BPSL1159
Alternate gene names: 53718795
Gene position: 1339742-1339113 (Counterclockwise)
Preceding gene: 53718796
Following gene: 53718794
Centisome position: 32.88
GC content: 73.97
Gene sequence:
>630_bases ATGCCCGAGCACGCCGCCCCGTCCTACCCGTTCGTCTACCTCGCCTCGCAAAGCCCCCGGCGCCGCGAACTGCTCGATCA GCTCGGCGTGCGCTACGAATTGCTCGCGCCCGCGCCCGATGAGGATGCCGAAGCGCTCGAGGCCGAGCTGCCGGGCGAGG CGCCCGACCATTACGTGCTGCGCGTGTGCGTCGCGAAGGCGCAAGCCGCGCGCGCGCGGCTCGTCGCGCGCGGCTTGCCG GCCGCGCCCGTGCTCGTCGCCGACACGACGGTGACGATCGACGGCGCGATCCTCGGCAAGCCCGCCGACGCCGCCGACGC GCTCGCGATGCTCGCGCGCCTCGCCGGCCGCACGCACGACGTGCTGACGGCGCTCGCGGTGATCGACGCGACGGGCGAGC TGATGCCGCCCGCGCTGTCGCGCTCGGCGGTCCGCTTCGCGCCCGCCGCGCGCGAGGCGCTCGCGCGCTACGTCGAAACC GGCGAGCCGTTCGGCAAGGCCGGCGCGTACGCGATCCAGGGGCGCGCGGCGGAATTCGTCGAGCGAATCGACGGCTCCCA TTCAGGTATCATGGGTCTGCCCCTTTTTGAGACTGCGGCGCTGCTGCGCGCCGCGCACGTCGCCTTCTGA
Upstream 100 bases:
>100_bases TACCGCGCGTGGAGCATCACGCAGAATCACCCCTACCATCGCGCGTAGCGGTGCGTCGCCCCGACGCGCCGCGCACGCGC CCATCGAGACTACCGATCAG
Downstream 100 bases:
>100_bases ACCGCACCATGAACGAAGAGATCCTGATCAACATCACGCCGCAGGAAACGCGGGTCGCGCTCGTCCAACAAGGCGCGGTG CAGGAGCTTCACGTCGAGCG
Product: Maf-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MPEHAAPSYPFVYLASQSPRRRELLDQLGVRYELLAPAPDEDAEALEAELPGEAPDHYVLRVCVAKAQAARARLVARGLP AAPVLVADTTVTIDGAILGKPADAADALAMLARLAGRTHDVLTALAVIDATGELMPPALSRSAVRFAPAAREALARYVET GEPFGKAGAYAIQGRAAEFVERIDGSHSGIMGLPLFETAALLRAAHVAF
Sequences:
>Translated_209_residues MPEHAAPSYPFVYLASQSPRRRELLDQLGVRYELLAPAPDEDAEALEAELPGEAPDHYVLRVCVAKAQAARARLVARGLP AAPVLVADTTVTIDGAILGKPADAADALAMLARLAGRTHDVLTALAVIDATGELMPPALSRSAVRFAPAAREALARYVET GEPFGKAGAYAIQGRAAEFVERIDGSHSGIMGLPLFETAALLRAAHVAF >Mature_208_residues PEHAAPSYPFVYLASQSPRRRELLDQLGVRYELLAPAPDEDAEALEAELPGEAPDHYVLRVCVAKAQAARARLVARGLPA APVLVADTTVTIDGAILGKPADAADALAMLARLAGRTHDVLTALAVIDATGELMPPALSRSAVRFAPAAREALARYVETG EPFGKAGAYAIQGRAAEFVERIDGSHSGIMGLPLFETAALLRAAHVAF
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family [H]
Homologues:
Organism=Homo sapiens, GI117553627, Length=191, Percent_Identity=36.1256544502618, Blast_Score=111, Evalue=5e-25, Organism=Homo sapiens, GI291045183, Length=190, Percent_Identity=32.6315789473684, Blast_Score=95, Evalue=5e-20, Organism=Homo sapiens, GI291045181, Length=137, Percent_Identity=37.2262773722628, Blast_Score=91, Evalue=5e-19, Organism=Homo sapiens, GI310133124, Length=118, Percent_Identity=38.135593220339, Blast_Score=88, Evalue=6e-18, Organism=Escherichia coli, GI1789646, Length=191, Percent_Identity=42.9319371727749, Blast_Score=133, Evalue=7e-33, Organism=Escherichia coli, GI87081830, Length=195, Percent_Identity=28.7179487179487, Blast_Score=80, Evalue=1e-16, Organism=Caenorhabditis elegans, GI193202443, Length=198, Percent_Identity=30.3030303030303, Blast_Score=102, Evalue=1e-22, Organism=Drosophila melanogaster, GI78706856, Length=194, Percent_Identity=37.6288659793814, Blast_Score=109, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003697 [H]
Pfam domain/function: PF02545 Maf [H]
EC number: NA
Molecular weight: Translated: 21984; Mature: 21853
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEHAAPSYPFVYLASQSPRRRELLDQLGVRYELLAPAPDEDAEALEAELPGEAPDHYVL CCCCCCCCCCEEEEECCCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHCCCCCCCHHHHH RVCVAKAQAARARLVARGLPAAPVLVADTTVTIDGAILGKPADAADALAMLARLAGRTHD HHHHHHHHHHHHHHHHCCCCCCCEEEECCEEEECCEEECCCCCHHHHHHHHHHHHCCHHH VLTALAVIDATGELMPPALSRSAVRFAPAAREALARYVETGEPFGKAGAYAIQGRAAEFV HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHH ERIDGSHSGIMGLPLFETAALLRAAHVAF HHHCCCCCCEECCHHHHHHHHHHHHHHCC >Mature Secondary Structure PEHAAPSYPFVYLASQSPRRRELLDQLGVRYELLAPAPDEDAEALEAELPGEAPDHYVL CCCCCCCCCEEEEECCCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHCCCCCCCHHHHH RVCVAKAQAARARLVARGLPAAPVLVADTTVTIDGAILGKPADAADALAMLARLAGRTHD HHHHHHHHHHHHHHHHCCCCCCCEEEECCEEEECCEEECCCCCHHHHHHHHHHHHCCHHH VLTALAVIDATGELMPPALSRSAVRFAPAAREALARYVETGEPFGKAGAYAIQGRAAEFV HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHH ERIDGSHSGIMGLPLFETAALLRAAHVAF HHHCCCCCCEECCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA