| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718780
Identifier: 53718780
GI number: 53718780
Start: 1331134
End: 1331427
Strand: Reverse
Name: 53718780
Synonym: BPSL1145
Alternate gene names: NA
Gene position: 1331427-1331134 (Counterclockwise)
Preceding gene: 53718781
Following gene: 53718779
Centisome position: 32.68
GC content: 64.29
Gene sequence:
>294_bases ATGATGAGCGCACGAGTCCAACAGCGCACACGCGGCAGCAAGTGGATGAAGATCCGCGCGCGCATCCTTCGGCGCGATCC GGTCTGCGTGCTGTGCGCTGAACAGGACGTTGTGCGCGAGTCCGTCGTCGTGGATCACATCACGCCGCTCGAACACGGCG GCACCGATGCCGACGACAACCTCAGAGGCCTATGTGCCGATCACCATGACGAGGTGACGCGCCAGCAGTTCGGCTATCGC GAGCGCAAGGCGTTCGGGCCGGACGGCCTGCCGATCGATGGCAGTTGGTCATGA
Upstream 100 bases:
>100_bases GTGAACTTGAGCGCGTCCTGTTCTGCTGGTCCCGCGCAAGCACGATGGGCTCGCAACCGTCGCGCCGCTTCCTGCCGCTG CCGCCGCCGAGGTCGATGCG
Downstream 100 bases:
>100_bases CCGGCGACCCCGGCCGGGGGGGGATGGTCGATTTTTCTTGCGTCGCATCGCGGGAAACCGCCCGTCCCCTTCGCTTTCAT AAACGTGGACAAAAAAGGGA
Product: putative phage-like protein
Products: NA
Alternate protein names: Endonuclease
Number of amino acids: Translated: 97; Mature: 97
Protein sequence:
>97_residues MMSARVQQRTRGSKWMKIRARILRRDPVCVLCAEQDVVRESVVVDHITPLEHGGTDADDNLRGLCADHHDEVTRQQFGYR ERKAFGPDGLPIDGSWS
Sequences:
>Translated_97_residues MMSARVQQRTRGSKWMKIRARILRRDPVCVLCAEQDVVRESVVVDHITPLEHGGTDADDNLRGLCADHHDEVTRQQFGYR ERKAFGPDGLPIDGSWS >Mature_97_residues MMSARVQQRTRGSKWMKIRARILRRDPVCVLCAEQDVVRESVVVDHITPLEHGGTDADDNLRGLCADHHDEVTRQQFGYR ERKAFGPDGLPIDGSWS
Specific function: Unknown
COG id: COG1403
COG function: function code V; Restriction endonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11045; Mature: 11045
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSARVQQRTRGSKWMKIRARILRRDPVCVLCAEQDVVRESVVVDHITPLEHGGTDADDN CCCCHHHHHHCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCC LRGLCADHHDEVTRQQFGYRERKAFGPDGLPIDGSWS CCCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MMSARVQQRTRGSKWMKIRARILRRDPVCVLCAEQDVVRESVVVDHITPLEHGGTDADDN CCCCHHHHHHCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCC LRGLCADHHDEVTRQQFGYRERKAFGPDGLPIDGSWS CCCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA