| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718745
Identifier: 53718745
GI number: 53718745
Start: 1287413
End: 1287934
Strand: Reverse
Name: 53718745
Synonym: BPSL1110
Alternate gene names: NA
Gene position: 1287934-1287413 (Counterclockwise)
Preceding gene: 53718750
Following gene: 53718744
Centisome position: 31.61
GC content: 72.03
Gene sequence:
>522_bases ATGCGCCTTCGCATCGCCCGCTCGCTGCGCGCGCCGCTCGGCGCGCTGACCGTCGCCGCGCTTCTCGCCGCCTGCACGAT GCCGACCCACCCCGATTCGGGCGCCCCCGCCCCCGATCCGTTCAACCCCGCGACGATCCAGTTGATCGACGACACGAGCT GGGAACTCGTCGGCTGGCGCAACGCCGACGGCTCGGCGCGCGACATCCCGCACGGCGACAACGGCGAGCCGATCAAGCTC GCGCTGTCGACGCAAACGGGCGTGCGGCGCGCGGCCGGCTTCTCGGGTTGCAACCGCTACATGGGCACCTACGACGTGAA GAACGGCGTGCTCGCGTTCGGCCCGCTCGCCGGCACGCGAATGGCGTGCGTGTCGCCCGCGCGCGCCGCGCTCGAGCGCG ACTACCTCGCCGCGCTCGGCCACATCTCGAAGGCCGGCGTACAGATGCGCGCGCCGCAGCAACTGGTCATCATCACCGAC GCCGACGCGACGCTCACGTTCGCGCGACGCGACGGCAAGTAA
Upstream 100 bases:
>100_bases GCGTCCGACGACGCGAGTGCGTTACCCTTACGGCTTCGCCCGCAACATTGAAGATTCGAAGAGGAACGAGGTCATGTTCA ATTCATCCGCAGCCGCGCGC
Downstream 100 bases:
>100_bases GCGCGGCGCGCGGCGGACGGCCCTGCCGGCGAACCGGACGGCGGGCGCCATCCGCCGGGCCGCGCGCGAGGACGGCGCGA GAATGCGCGCCGTTCCCGAA
Product: putative lipoprotein
Products: NA
Alternate protein names: Heat Shock Lipoprotein; Meta/HslJ Family; Transmembrane Lipoprotein DUF; Heat Shock Protein
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MRLRIARSLRAPLGALTVAALLAACTMPTHPDSGAPAPDPFNPATIQLIDDTSWELVGWRNADGSARDIPHGDNGEPIKL ALSTQTGVRRAAGFSGCNRYMGTYDVKNGVLAFGPLAGTRMACVSPARAALERDYLAALGHISKAGVQMRAPQQLVIITD ADATLTFARRDGK
Sequences:
>Translated_173_residues MRLRIARSLRAPLGALTVAALLAACTMPTHPDSGAPAPDPFNPATIQLIDDTSWELVGWRNADGSARDIPHGDNGEPIKL ALSTQTGVRRAAGFSGCNRYMGTYDVKNGVLAFGPLAGTRMACVSPARAALERDYLAALGHISKAGVQMRAPQQLVIITD ADATLTFARRDGK >Mature_173_residues MRLRIARSLRAPLGALTVAALLAACTMPTHPDSGAPAPDPFNPATIQLIDDTSWELVGWRNADGSARDIPHGDNGEPIKL ALSTQTGVRRAAGFSGCNRYMGTYDVKNGVLAFGPLAGTRMACVSPARAALERDYLAALGHISKAGVQMRAPQQLVIITD ADATLTFARRDGK
Specific function: Unknown
COG id: COG3187
COG function: function code O; Heat shock protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18281; Mature: 18281
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLRIARSLRAPLGALTVAALLAACTMPTHPDSGAPAPDPFNPATIQLIDDTSWELVGWR CCEEHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEE NADGSARDIPHGDNGEPIKLALSTQTGVRRAAGFSGCNRYMGTYDVKNGVLAFGPLAGTR CCCCCCCCCCCCCCCCEEEEEEECCCCHHHHCCCCCHHHCCCCEECCCCEEEECCCCCCC MACVSPARAALERDYLAALGHISKAGVQMRAPQQLVIITDADATLTFARRDGK HHHCCHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEEECCCCEEEEEECCCC >Mature Secondary Structure MRLRIARSLRAPLGALTVAALLAACTMPTHPDSGAPAPDPFNPATIQLIDDTSWELVGWR CCEEHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEE NADGSARDIPHGDNGEPIKLALSTQTGVRRAAGFSGCNRYMGTYDVKNGVLAFGPLAGTR CCCCCCCCCCCCCCCCEEEEEEECCCCHHHHCCCCCHHHCCCCEECCCCEEEECCCCCCC MACVSPARAALERDYLAALGHISKAGVQMRAPQQLVIITDADATLTFARRDGK HHHCCHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEEECCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA