Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

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The map label for this gene is 53718745

Identifier: 53718745

GI number: 53718745

Start: 1287413

End: 1287934

Strand: Reverse

Name: 53718745

Synonym: BPSL1110

Alternate gene names: NA

Gene position: 1287934-1287413 (Counterclockwise)

Preceding gene: 53718750

Following gene: 53718744

Centisome position: 31.61

GC content: 72.03

Gene sequence:

>522_bases
ATGCGCCTTCGCATCGCCCGCTCGCTGCGCGCGCCGCTCGGCGCGCTGACCGTCGCCGCGCTTCTCGCCGCCTGCACGAT
GCCGACCCACCCCGATTCGGGCGCCCCCGCCCCCGATCCGTTCAACCCCGCGACGATCCAGTTGATCGACGACACGAGCT
GGGAACTCGTCGGCTGGCGCAACGCCGACGGCTCGGCGCGCGACATCCCGCACGGCGACAACGGCGAGCCGATCAAGCTC
GCGCTGTCGACGCAAACGGGCGTGCGGCGCGCGGCCGGCTTCTCGGGTTGCAACCGCTACATGGGCACCTACGACGTGAA
GAACGGCGTGCTCGCGTTCGGCCCGCTCGCCGGCACGCGAATGGCGTGCGTGTCGCCCGCGCGCGCCGCGCTCGAGCGCG
ACTACCTCGCCGCGCTCGGCCACATCTCGAAGGCCGGCGTACAGATGCGCGCGCCGCAGCAACTGGTCATCATCACCGAC
GCCGACGCGACGCTCACGTTCGCGCGACGCGACGGCAAGTAA

Upstream 100 bases:

>100_bases
GCGTCCGACGACGCGAGTGCGTTACCCTTACGGCTTCGCCCGCAACATTGAAGATTCGAAGAGGAACGAGGTCATGTTCA
ATTCATCCGCAGCCGCGCGC

Downstream 100 bases:

>100_bases
GCGCGGCGCGCGGCGGACGGCCCTGCCGGCGAACCGGACGGCGGGCGCCATCCGCCGGGCCGCGCGCGAGGACGGCGCGA
GAATGCGCGCCGTTCCCGAA

Product: putative lipoprotein

Products: NA

Alternate protein names: Heat Shock Lipoprotein; Meta/HslJ Family; Transmembrane Lipoprotein DUF; Heat Shock Protein

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MRLRIARSLRAPLGALTVAALLAACTMPTHPDSGAPAPDPFNPATIQLIDDTSWELVGWRNADGSARDIPHGDNGEPIKL
ALSTQTGVRRAAGFSGCNRYMGTYDVKNGVLAFGPLAGTRMACVSPARAALERDYLAALGHISKAGVQMRAPQQLVIITD
ADATLTFARRDGK

Sequences:

>Translated_173_residues
MRLRIARSLRAPLGALTVAALLAACTMPTHPDSGAPAPDPFNPATIQLIDDTSWELVGWRNADGSARDIPHGDNGEPIKL
ALSTQTGVRRAAGFSGCNRYMGTYDVKNGVLAFGPLAGTRMACVSPARAALERDYLAALGHISKAGVQMRAPQQLVIITD
ADATLTFARRDGK
>Mature_173_residues
MRLRIARSLRAPLGALTVAALLAACTMPTHPDSGAPAPDPFNPATIQLIDDTSWELVGWRNADGSARDIPHGDNGEPIKL
ALSTQTGVRRAAGFSGCNRYMGTYDVKNGVLAFGPLAGTRMACVSPARAALERDYLAALGHISKAGVQMRAPQQLVIITD
ADATLTFARRDGK

Specific function: Unknown

COG id: COG3187

COG function: function code O; Heat shock protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18281; Mature: 18281

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLRIARSLRAPLGALTVAALLAACTMPTHPDSGAPAPDPFNPATIQLIDDTSWELVGWR
CCEEHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEE
NADGSARDIPHGDNGEPIKLALSTQTGVRRAAGFSGCNRYMGTYDVKNGVLAFGPLAGTR
CCCCCCCCCCCCCCCCEEEEEEECCCCHHHHCCCCCHHHCCCCEECCCCEEEECCCCCCC
MACVSPARAALERDYLAALGHISKAGVQMRAPQQLVIITDADATLTFARRDGK
HHHCCHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEEECCCCEEEEEECCCC
>Mature Secondary Structure
MRLRIARSLRAPLGALTVAALLAACTMPTHPDSGAPAPDPFNPATIQLIDDTSWELVGWR
CCEEHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEE
NADGSARDIPHGDNGEPIKLALSTQTGVRRAAGFSGCNRYMGTYDVKNGVLAFGPLAGTR
CCCCCCCCCCCCCCCCEEEEEEECCCCHHHHCCCCCHHHCCCCEECCCCEEEECCCCCCC
MACVSPARAALERDYLAALGHISKAGVQMRAPQQLVIITDADATLTFARRDGK
HHHCCHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEEECCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA