| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is gluQ
Identifier: 53718750
GI number: 53718750
Start: 1293310
End: 1294203
Strand: Reverse
Name: gluQ
Synonym: BPSL1115
Alternate gene names: 53718750
Gene position: 1294203-1293310 (Counterclockwise)
Preceding gene: 53718751
Following gene: 53718745
Centisome position: 31.76
GC content: 74.16
Gene sequence:
>894_bases ATGACACGCTATCGCGGGCGCTTCGCGCCGTCGCCCACCGGCCCCCTGCACTTCGGCTCGCTCGTCGGCGCGCTCGCGAG CTGGCTCGACGCGCGCGCGTGGGGCGGCGCGTGGCTCGTGCGAATCGAGGATATCGACGGCCCGCGCACGGTGCCAGGCG CGGCCGAAGACATGCTCGCGACGCTGCGCGGCTTCGGCTTCATCGCCGACGAGCCGCCCGTCTGGCAAAGCGCGCGCGTC GCGCACTACGAAGCGGCGCTCGCGCGGCTCACCGCCGCGGGGCTCGTCTATCCGTGCGGCTGCTCGCGCAAGGAGATCGC CGATTCGCTGCGCGCCGCGCACGAGCGGCACACGACGCTCGCGTATCCCGGCACGTGCCGCACGGGCCTGCACGGCAAGC CCGCGCGCGCATGGCGCTTGCGCGTGCCGGACGGCGCCGCGGCCGTCGTCGCGTTCGACGACCGCTGGCAGCGCGCGCAA ACGCAGAATCTCGCGACCGAAGTCGGCGATTTCGTGCTGAAGCGCGCGGACGGACAATGGGCGTATCAACTCGCCGTCGT CGTCGACGACGGCGATGCGAACATCACGCACGTCGTGCGCGGCGCCGATCTGCTCGACTCGACCGCTCGCCAGATCTACC TGCAGCGCTGCCTCGGGCTGCCGACGCCGCGCTATCTGCACGTGCCTGTCGTCCTCGACGCGAACGGCGAGAAGCTCAGC AAGCAAACGGGCGCGGCGGCGCTCGATCCCGCCGCGCCGCTGCCGGCGCTCGCCGCCGCCGCGCGGCACCTGGGGCTCGC GCTCGACGGCGCGGCGTGCGCGTCGCTCGACGCGTTCCAGGCGGCCGCGATCGCCGCGTGGGACGCGCGCTTCGGGCCGA ACGCGCGCGGCTGA
Upstream 100 bases:
>100_bases TCCGGCACGCCGGGCCGGCGCGCGGAGCCGGGCGCCGAACCGGCGCGCGCCGTGTGAGCCCGCGCAGCCCATTGCTCCGC GTCGCCGCGCGCCGCATCGA
Downstream 100 bases:
>100_bases AGACACCGGCCGGATGATGCGGCCTGGTCGCTTCGACCGTCGTTGCGGCCGTCGCGCCGCTACGCCGGCGCACCGTCGGC GATCGCCGAGCCGGCGATTC
Product: glutamyl-Q tRNA(Asp) synthetase
Products: NA
Alternate protein names: Glu-Q-RSs
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MTRYRGRFAPSPTGPLHFGSLVGALASWLDARAWGGAWLVRIEDIDGPRTVPGAAEDMLATLRGFGFIADEPPVWQSARV AHYEAALARLTAAGLVYPCGCSRKEIADSLRAAHERHTTLAYPGTCRTGLHGKPARAWRLRVPDGAAAVVAFDDRWQRAQ TQNLATEVGDFVLKRADGQWAYQLAVVVDDGDANITHVVRGADLLDSTARQIYLQRCLGLPTPRYLHVPVVLDANGEKLS KQTGAAALDPAAPLPALAAAARHLGLALDGAACASLDAFQAAAIAAWDARFGPNARG
Sequences:
>Translated_297_residues MTRYRGRFAPSPTGPLHFGSLVGALASWLDARAWGGAWLVRIEDIDGPRTVPGAAEDMLATLRGFGFIADEPPVWQSARV AHYEAALARLTAAGLVYPCGCSRKEIADSLRAAHERHTTLAYPGTCRTGLHGKPARAWRLRVPDGAAAVVAFDDRWQRAQ TQNLATEVGDFVLKRADGQWAYQLAVVVDDGDANITHVVRGADLLDSTARQIYLQRCLGLPTPRYLHVPVVLDANGEKLS KQTGAAALDPAAPLPALAAAARHLGLALDGAACASLDAFQAAAIAAWDARFGPNARG >Mature_296_residues TRYRGRFAPSPTGPLHFGSLVGALASWLDARAWGGAWLVRIEDIDGPRTVPGAAEDMLATLRGFGFIADEPPVWQSARVA HYEAALARLTAAGLVYPCGCSRKEIADSLRAAHERHTTLAYPGTCRTGLHGKPARAWRLRVPDGAAAVVAFDDRWQRAQT QNLATEVGDFVLKRADGQWAYQLAVVVDDGDANITHVVRGADLLDSTARQIYLQRCLGLPTPRYLHVPVVLDANGEKLSK QTGAAALDPAAPLPALAAAARHLGLALDGAACASLDAFQAAAIAAWDARFGPNARG
Specific function: Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble positi
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily
Homologues:
Organism=Homo sapiens, GI134288884, Length=264, Percent_Identity=37.1212121212121, Blast_Score=150, Evalue=1e-36, Organism=Escherichia coli, GI226510925, Length=264, Percent_Identity=45.8333333333333, Blast_Score=202, Evalue=1e-53, Organism=Escherichia coli, GI1788743, Length=247, Percent_Identity=35.6275303643725, Blast_Score=158, Evalue=5e-40, Organism=Caenorhabditis elegans, GI71993394, Length=290, Percent_Identity=31.0344827586207, Blast_Score=129, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6324540, Length=259, Percent_Identity=33.2046332046332, Blast_Score=134, Evalue=2e-32, Organism=Drosophila melanogaster, GI24665321, Length=260, Percent_Identity=34.6153846153846, Blast_Score=129, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLUQ_BURMA (Q62IG0)
Other databases:
- EMBL: CP000010 - RefSeq: YP_103510.1 - ProteinModelPortal: Q62IG0 - SMR: Q62IG0 - GeneID: 3090853 - GenomeReviews: CP000010_GR - KEGG: bma:BMA1915 - TIGR: BMA1915 - HOGENOM: HBG628189 - OMA: IIKRSDG - PhylomeDB: Q62IG0 - ProtClustDB: PRK05710 - BioCyc: BMAL243160:BMA_1915-MONOMER - GO: GO:0005737 - GO: GO:0006412 - HAMAP: MF_01428 - InterPro: IPR022380 - InterPro: IPR000924 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR03838
Pfam domain/function: PF00749 tRNA-synt_1c
EC number: NA
Molecular weight: Translated: 31600; Mature: 31469
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 43-43 BINDING 182-182 BINDING 200-200 BINDING 241-241
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRYRGRFAPSPTGPLHFGSLVGALASWLDARAWGGAWLVRIEDIDGPRTVPGAAEDMLA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHH TLRGFGFIADEPPVWQSARVAHYEAALARLTAAGLVYPCGCSRKEIADSLRAAHERHTTL HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEECCCCCHHHHHHHHHHHHHHCCEE AYPGTCRTGLHGKPARAWRLRVPDGAAAVVAFDDRWQRAQTQNLATEVGDFVLKRADGQW ECCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCE AYQLAVVVDDGDANITHVVRGADLLDSTARQIYLQRCLGLPTPRYLHVPVVLDANGEKLS EEEEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHH KQTGAAALDPAAPLPALAAAARHLGLALDGAACASLDAFQAAAIAAWDARFGPNARG HHCCCCCCCCCCCHHHHHHHHHHHCEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TRYRGRFAPSPTGPLHFGSLVGALASWLDARAWGGAWLVRIEDIDGPRTVPGAAEDMLA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHH TLRGFGFIADEPPVWQSARVAHYEAALARLTAAGLVYPCGCSRKEIADSLRAAHERHTTL HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEECCCCCHHHHHHHHHHHHHHCCEE AYPGTCRTGLHGKPARAWRLRVPDGAAAVVAFDDRWQRAQTQNLATEVGDFVLKRADGQW ECCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCE AYQLAVVVDDGDANITHVVRGADLLDSTARQIYLQRCLGLPTPRYLHVPVVLDANGEKLS EEEEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHH KQTGAAALDPAAPLPALAAAARHLGLALDGAACASLDAFQAAAIAAWDARFGPNARG HHCCCCCCCCCCCHHHHHHHHHHHCEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA