| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is lysN [H]
Identifier: 53718719
GI number: 53718719
Start: 1253565
End: 1254767
Strand: Reverse
Name: lysN [H]
Synonym: BPSL1083
Alternate gene names: 53718719
Gene position: 1254767-1253565 (Counterclockwise)
Preceding gene: 53718720
Following gene: 53718718
Centisome position: 30.8
GC content: 69.08
Gene sequence:
>1203_bases ATGACACCGACCGAGGAGACCATGAATCCGAGCGATCTCAAGCCGCCCCGCTGGGCCCTGTCCGAACGCGCACGCAAGCT CACGAGCTCGGCGATCCGCGAAATCCTGAAAGTGACCGAGCGCCCCGAGGTGATCTCGTTCGCGGGCGGCCTGCCCTCGC CCGCGACGTTCCCCGCCGAGCGCATGCGCGAGGCCGCGGAGCGCGTGCTGCGCGATTCGCCCGCCGCCGCGCTGCAATAC AGCGCGACGGAAGGCTTCCTGCCGCTGCGCGAGTGGATTGCCGAGCGCTACCGCGTGCGCACGACGCAGGTGCTCGTCAC GACGGGCTCGCAGCAGGCGCTCGATCTGCTCGGCAAGGTGCTGATCGACCCGGCGAGCCGCGTGCTCGTGGAGACGCCGA CCTACCTCGGCGCGCTGCAGTCGTTCTCGCTGTACGAGCCGATCTACGCGCAGGTGCCGACCGACGACGCGGGCCTGCTG CCCGAGGCGCTCACGCCCGAGCTGACGAAGGACGCGCGATTGTTGTATGCGCAACCGAACTTCCAGAACCCGACGGGCCG CCGCCTGAGCGTCGAGCGCCGCCGCGCGCTCGCCGCCTTCGCGCGGACGAGCCCGTTCCCGGTGCTCGAGGACGATCCGT ACGGCGCGCTGAACTACGCGGGCGAGCCGCTGCCGACGATGCTGTCGATGGCGCCCGATCACATCGTCCATCTCGGCACG TTCTCGAAGGTGCTCGCGCCCGGCCTGCGGATCGGCTATATCATTGCGCCCGAGGAGCTGCACTTCAAGCTCGTGCAGGC CAAGCAGGCGACCGACCTGCACACGCCGTCGCTCACGCAGCGCATCGCCCACGAAGTCATCCAGGACGGCTTCCTCGATG CGCACATCCCGACGATCCGCAAGCTCTACGGCGCGCAGTGCGAAGCGATGCTCGCATCGCTCGCGCGGCACATGCCGCAA GGCGTGAGCTGGAACCGCCCGGAAGGCGGGATGTTCATCTGGGTGACGCTGCCCGCGCAGATCGACAGCATGCAGCTCCT CGAGACGGCGGTCGCGAACAACGTCGCGTTCGTGCCGGGCGCGCCGTTCTTCGCGAACGACGCGCAGAAGAACACGCTGC GGCTGTCGTTCGTCACCGTGCCGCCGGAGAAGATCGAGGAAGGCGTCGCGCGGCTCGGCAAGCTGTTGCGCGAGCGCCTG TGA
Upstream 100 bases:
>100_bases CGTCGTGCTCGGCCGCCGCGCCGCCGTGGGCGCCGCGCCGCATCCGGCTCGCGCCGCCTGATTTGACGAGCGATAATCGA CGCTTTCATCCGCACGACCC
Downstream 100 bases:
>100_bases CGCGCCTCGTTCGCTCACGCATTCACGATTGACTCACTCACGAACTCACGAGGATATGAATCAGATGGCAAACGTCTACG ACAAACTGAAGGAACTCGGC
Product: putative aminotransferase
Products: NA
Alternate protein names: 2-aminoadipate aminotransferase; Alpha-aminoadipate aminotransferase; AAA-AT; AadAT [H]
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MTPTEETMNPSDLKPPRWALSERARKLTSSAIREILKVTERPEVISFAGGLPSPATFPAERMREAAERVLRDSPAAALQY SATEGFLPLREWIAERYRVRTTQVLVTTGSQQALDLLGKVLIDPASRVLVETPTYLGALQSFSLYEPIYAQVPTDDAGLL PEALTPELTKDARLLYAQPNFQNPTGRRLSVERRRALAAFARTSPFPVLEDDPYGALNYAGEPLPTMLSMAPDHIVHLGT FSKVLAPGLRIGYIIAPEELHFKLVQAKQATDLHTPSLTQRIAHEVIQDGFLDAHIPTIRKLYGAQCEAMLASLARHMPQ GVSWNRPEGGMFIWVTLPAQIDSMQLLETAVANNVAFVPGAPFFANDAQKNTLRLSFVTVPPEKIEEGVARLGKLLRERL
Sequences:
>Translated_400_residues MTPTEETMNPSDLKPPRWALSERARKLTSSAIREILKVTERPEVISFAGGLPSPATFPAERMREAAERVLRDSPAAALQY SATEGFLPLREWIAERYRVRTTQVLVTTGSQQALDLLGKVLIDPASRVLVETPTYLGALQSFSLYEPIYAQVPTDDAGLL PEALTPELTKDARLLYAQPNFQNPTGRRLSVERRRALAAFARTSPFPVLEDDPYGALNYAGEPLPTMLSMAPDHIVHLGT FSKVLAPGLRIGYIIAPEELHFKLVQAKQATDLHTPSLTQRIAHEVIQDGFLDAHIPTIRKLYGAQCEAMLASLARHMPQ GVSWNRPEGGMFIWVTLPAQIDSMQLLETAVANNVAFVPGAPFFANDAQKNTLRLSFVTVPPEKIEEGVARLGKLLRERL >Mature_399_residues TPTEETMNPSDLKPPRWALSERARKLTSSAIREILKVTERPEVISFAGGLPSPATFPAERMREAAERVLRDSPAAALQYS ATEGFLPLREWIAERYRVRTTQVLVTTGSQQALDLLGKVLIDPASRVLVETPTYLGALQSFSLYEPIYAQVPTDDAGLLP EALTPELTKDARLLYAQPNFQNPTGRRLSVERRRALAAFARTSPFPVLEDDPYGALNYAGEPLPTMLSMAPDHIVHLGTF SKVLAPGLRIGYIIAPEELHFKLVQAKQATDLHTPSLTQRIAHEVIQDGFLDAHIPTIRKLYGAQCEAMLASLARHMPQG VSWNRPEGGMFIWVTLPAQIDSMQLLETAVANNVAFVPGAPFFANDAQKNTLRLSFVTVPPEKIEEGVARLGKLLRERL
Specific function: Catalyzes the transfer of an amino group between 2- oxoadipate (2-OA) and glutamate (Glu) to yield alpha-aminodipate (AAA). It can also transaminate glutamate, leucine, and aromatic amino acids. It also conbtributes in the biosynthesis of other amino acid
COG id: COG1167
COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI7705897, Length=414, Percent_Identity=30.4347826086957, Blast_Score=185, Evalue=6e-47, Organism=Homo sapiens, GI33469970, Length=414, Percent_Identity=30.4347826086957, Blast_Score=185, Evalue=6e-47, Organism=Escherichia coli, GI1787710, Length=381, Percent_Identity=27.8215223097113, Blast_Score=152, Evalue=5e-38, Organism=Escherichia coli, GI1790797, Length=338, Percent_Identity=28.698224852071, Blast_Score=126, Evalue=3e-30, Organism=Escherichia coli, GI48994949, Length=227, Percent_Identity=27.3127753303965, Blast_Score=66, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6321236, Length=489, Percent_Identity=23.3128834355828, Blast_Score=101, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6321000, Length=431, Percent_Identity=25.9860788863109, Blast_Score=97, Evalue=5e-21, Organism=Drosophila melanogaster, GI21356535, Length=395, Percent_Identity=27.3417721518987, Blast_Score=131, Evalue=7e-31,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.39 [H]
Molecular weight: Translated: 44233; Mature: 44102
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPTEETMNPSDLKPPRWALSERARKLTSSAIREILKVTERPEVISFAGGLPSPATFPAE CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHH RMREAAERVLRDSPAAALQYSATEGFLPLREWIAERYRVRTTQVLVTTGSQQALDLLGKV HHHHHHHHHHHCCCCHHEEECCCCCCHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHH LIDPASRVLVETPTYLGALQSFSLYEPIYAQVPTDDAGLLPEALTPELTKDARLLYAQPN HHCCCHHHEEECCHHHHHHHHHHHCCCHHEECCCCCCCCCCHHCCCCCCCCCEEEEECCC FQNPTGRRLSVERRRALAAFARTSPFPVLEDDPYGALNYAGEPLPTMLSMAPDHIVHLGT CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHEEEHHH FSKVLAPGLRIGYIIAPEELHFKLVQAKQATDLHTPSLTQRIAHEVIQDGFLDAHIPTIR HHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHH KLYGAQCEAMLASLARHMPQGVSWNRPEGGMFIWVTLPAQIDSMQLLETAVANNVAFVPG HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCEEECCC APFFANDAQKNTLRLSFVTVPPEKIEEGVARLGKLLRERL CCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TPTEETMNPSDLKPPRWALSERARKLTSSAIREILKVTERPEVISFAGGLPSPATFPAE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHH RMREAAERVLRDSPAAALQYSATEGFLPLREWIAERYRVRTTQVLVTTGSQQALDLLGKV HHHHHHHHHHHCCCCHHEEECCCCCCHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHH LIDPASRVLVETPTYLGALQSFSLYEPIYAQVPTDDAGLLPEALTPELTKDARLLYAQPN HHCCCHHHEEECCHHHHHHHHHHHCCCHHEECCCCCCCCCCHHCCCCCCCCCEEEEECCC FQNPTGRRLSVERRRALAAFARTSPFPVLEDDPYGALNYAGEPLPTMLSMAPDHIVHLGT CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHEEEHHH FSKVLAPGLRIGYIIAPEELHFKLVQAKQATDLHTPSLTQRIAHEVIQDGFLDAHIPTIR HHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHH KLYGAQCEAMLASLARHMPQGVSWNRPEGGMFIWVTLPAQIDSMQLLETAVANNVAFVPG HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCEEECCC APFFANDAQKNTLRLSFVTVPPEKIEEGVARLGKLLRERL CCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA