Click here to switch to the map view.

The map label for this gene is 53718718

Identifier: 53718718

GI number: 53718718

Start: 1253042

End: 1253509

Strand: Reverse

Name: 53718718

Synonym: BPSL1082

Alternate gene names: NA

Gene position: 1253509-1253042 (Counterclockwise)

Preceding gene: 53718719

Following gene: 53718717

Centisome position: 30.76

GC content: 64.96

Gene sequence:

>468_bases
ATGAATCAGATGGCAAACGTCTACGACAAACTGAAGGAACTCGGCATCGAGCTGCCCGTCGCGGGTGCGCCCGCCGCCGC
CTACGTGATGAGCGCGCAAAGCGGCAACACCGTCTATCTGTCGGGCCATATCGCGAAGAAGGACGGCAAGGTGTGGGCCG
GCAAGCTCGGCCTCGACGTGACGACCGAGCAAGGCAAGCTGGCCGCGCGCGCGGTCGCGATCGACCTGCTCGCGACGCTG
CACGCGCACACGGGCGACTTGAACAAGGTCAAGCGCATCGTCAAGGTGATGAGCCTCGTGAACTCGACGCTCGAGTTCAC
CGAGCAGCACATCGTGACGAACGGCGCATCGGAGCTGATCGCGGAAGTCTTCGGCGACGCGGGCAAGCACGCGCGCTCGG
CGTTCGGCGTCGCGCAGATTCCGCTCGGCGCGTGCGTCGAGATCGAGCTGATCGCCGAACTCGCGTAA

Upstream 100 bases:

>100_bases
GAAGGCGTCGCGCGGCTCGGCAAGCTGTTGCGCGAGCGCCTGTGACGCGCCTCGTTCGCTCACGCATTCACGATTGACTC
ACTCACGAACTCACGAGGAT

Downstream 100 bases:

>100_bases
CGCGATGGCCGCCGCCCGCCGCGCCGCGCACACGGTGCGCTTCAAGCAGGTCGACGTGTTCACGTCGGTGCCGTTCAAGG
GCAATCCGCTCGCCGTCGTA

Product: hypothetical protein

Products: NA

Alternate protein names: Translation Initiation Inhibitor; Endoribonuclease L-PSP Family Protein; Endoribonuclease L-Psp; Translation Initiation Inhibitor YjgF Family; Endoribonuclease; Transcriptional Regulator; Transcription Regulator; Endoribonuclease L-PSP Superfamily; Translation Initiation Inhibitor Protein; Endoribonuclease Family Protein; L-PSP Family Endoribonuclease; Endoribonuclease L-PSP Family; Translation Initiation Inhibitor Protein YjgF Family; 2-Aminomuconate Deaminase; YjgF-Family Protein; Peptidase C; Creatininase; Translation Initiation Inhibitor YjgF; YjgF Family Translation Initiation Inhibitor; Endoribonuclease-L-PSP Family Protein

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MNQMANVYDKLKELGIELPVAGAPAAAYVMSAQSGNTVYLSGHIAKKDGKVWAGKLGLDVTTEQGKLAARAVAIDLLATL
HAHTGDLNKVKRIVKVMSLVNSTLEFTEQHIVTNGASELIAEVFGDAGKHARSAFGVAQIPLGACVEIELIAELA

Sequences:

>Translated_155_residues
MNQMANVYDKLKELGIELPVAGAPAAAYVMSAQSGNTVYLSGHIAKKDGKVWAGKLGLDVTTEQGKLAARAVAIDLLATL
HAHTGDLNKVKRIVKVMSLVNSTLEFTEQHIVTNGASELIAEVFGDAGKHARSAFGVAQIPLGACVEIELIAELA
>Mature_155_residues
MNQMANVYDKLKELGIELPVAGAPAAAYVMSAQSGNTVYLSGHIAKKDGKVWAGKLGLDVTTEQGKLAARAVAIDLLATL
HAHTGDLNKVKRIVKVMSLVNSTLEFTEQHIVTNGASELIAEVFGDAGKHARSAFGVAQIPLGACVEIELIAELA

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16278; Mature: 16278

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQMANVYDKLKELGIELPVAGAPAAAYVMSAQSGNTVYLSGHIAKKDGKVWAGKLGLDV
CCHHHHHHHHHHHCCCCCCCCCCCHHHHEEECCCCCEEEEEEEEECCCCCEEEEEECCEE
TTEQGKLAARAVAIDLLATLHAHTGDLNKVKRIVKVMSLVNSTLEFTEQHIVTNGASELI
ECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
AEVFGDAGKHARSAFGVAQIPLGACVEIELIAELA
HHHHCCCCHHHHHHCCHHCCCCCCEEHHHEEEECC
>Mature Secondary Structure
MNQMANVYDKLKELGIELPVAGAPAAAYVMSAQSGNTVYLSGHIAKKDGKVWAGKLGLDV
CCHHHHHHHHHHHCCCCCCCCCCCHHHHEEECCCCCEEEEEEEEECCCCCEEEEEECCEE
TTEQGKLAARAVAIDLLATLHAHTGDLNKVKRIVKVMSLVNSTLEFTEQHIVTNGASELI
ECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
AEVFGDAGKHARSAFGVAQIPLGACVEIELIAELA
HHHHCCCCHHHHHHCCHHCCCCCCEEHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA