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The map label for this gene is yddE [H]

Identifier: 53718717

GI number: 53718717

Start: 1252138

End: 1253037

Strand: Reverse

Name: yddE [H]

Synonym: BPSL1081

Alternate gene names: 53718717

Gene position: 1253037-1252138 (Counterclockwise)

Preceding gene: 53718718

Following gene: 53718716

Centisome position: 30.75

GC content: 75.67

Gene sequence:

>900_bases
ATGGCCGCCGCCCGCCGCGCCGCGCACACGGTGCGCTTCAAGCAGGTCGACGTGTTCACGTCGGTGCCGTTCAAGGGCAA
TCCGCTCGCCGTCGTATTCGACGCGGATGCGCTCAGCGACGCCGACATGCTCGCGATCGCCCGCTGGACCAACCTGTCCG
AGACCGCGTTCCTCGTCGCCCCGAGCGATCCCGCCGCCGACTATCGCGTGCGGATCTTCACGACGGGCGGCGAGCTGCCA
TTCGCCGGCCATCCGACGCTCGGCGCCGCGCATGCGTTTCTCGACGCGGGCGCGCAGCCGAAAGCACCCGGGCGGCTCGT
CCAGCAATGCGGCGCGGGGCTCGTCGAGCTCGCGAAGCGCGACGGCGGCTGGGCGTTCGCCGCGCCGAGCGCGCGCGTGA
CGCCGCTTGCCGAGCGCGAGTGGCCCGCGCTCGCGGCCGCGCTGCGCACCGGCGCGATCGATTTCGGCGTGCCGCCGCGG
GCGGTCGACAACGGCGCGCCGTGGCTCGTCGTGCGGCTCGCGTCGGCGGCGGACTGTCTCGCGCTCGCGCCGGACCACGC
GGCGCTCGCGCCGATCGTCGCCGCGCTCGGCGCGGCCGGCCTCGCCGCGTACGGCCCGCATCCGGCCGACGGCCCGGCGA
CGTTCGAGGTGCGCTGCCTGATGACGGGCGACGCGTTCGGCGCCGCCGGCGAAGACCCTGTGACGGGCAGCGCGAACGCG
GCGATCGCGGGCGTGCTCGCGCAAGCGGGCCGCCGCCCGGGCCGCCGCTATACCGCGCGCCAGGGCACGGTGCTCGGCCG
CGACGGCCGAATCTCGGTCGATTACGACGACGACGCGGGCAAGATCTGGATCGGCGGCGCGGCCGTCACGCTCGTCGACG
GCACCATCCGGCTGCGCTGA

Upstream 100 bases:

>100_bases
GGCGACGCGGGCAAGCACGCGCGCTCGGCGTTCGGCGTCGCGCAGATTCCGCTCGGCGCGTGCGTCGAGATCGAGCTGAT
CGCCGAACTCGCGTAACGCG

Downstream 100 bases:

>100_bases
ACGACGTTTTCGCCCGGCCGCGCCCGCCGCGCGGCCGAGGCCCCGTGCGGGCCGCGCACGAGGCCGCCCCCTCCTCGCCC
GGTTAGCGATATCCTGCCCG

Product: putative phenazine biosynthesis-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MAAARRAAHTVRFKQVDVFTSVPFKGNPLAVVFDADALSDADMLAIARWTNLSETAFLVAPSDPAADYRVRIFTTGGELP
FAGHPTLGAAHAFLDAGAQPKAPGRLVQQCGAGLVELAKRDGGWAFAAPSARVTPLAEREWPALAAALRTGAIDFGVPPR
AVDNGAPWLVVRLASAADCLALAPDHAALAPIVAALGAAGLAAYGPHPADGPATFEVRCLMTGDAFGAAGEDPVTGSANA
AIAGVLAQAGRRPGRRYTARQGTVLGRDGRISVDYDDDAGKIWIGGAAVTLVDGTIRLR

Sequences:

>Translated_299_residues
MAAARRAAHTVRFKQVDVFTSVPFKGNPLAVVFDADALSDADMLAIARWTNLSETAFLVAPSDPAADYRVRIFTTGGELP
FAGHPTLGAAHAFLDAGAQPKAPGRLVQQCGAGLVELAKRDGGWAFAAPSARVTPLAEREWPALAAALRTGAIDFGVPPR
AVDNGAPWLVVRLASAADCLALAPDHAALAPIVAALGAAGLAAYGPHPADGPATFEVRCLMTGDAFGAAGEDPVTGSANA
AIAGVLAQAGRRPGRRYTARQGTVLGRDGRISVDYDDDAGKIWIGGAAVTLVDGTIRLR
>Mature_298_residues
AAARRAAHTVRFKQVDVFTSVPFKGNPLAVVFDADALSDADMLAIARWTNLSETAFLVAPSDPAADYRVRIFTTGGELPF
AGHPTLGAAHAFLDAGAQPKAPGRLVQQCGAGLVELAKRDGGWAFAAPSARVTPLAEREWPALAAALRTGAIDFGVPPRA
VDNGAPWLVVRLASAADCLALAPDHAALAPIVAALGAAGLAAYGPHPADGPATFEVRCLMTGDAFGAAGEDPVTGSANAA
IAGVLAQAGRRPGRRYTARQGTVLGRDGRISVDYDDDAGKIWIGGAAVTLVDGTIRLR

Specific function: Unknown

COG id: COG0384

COG function: function code R; Predicted epimerase, PhzC/PhzF homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phzF family [H]

Homologues:

Organism=Escherichia coli, GI1787737, Length=289, Percent_Identity=32.5259515570934, Blast_Score=108, Evalue=6e-25,
Organism=Saccharomyces cerevisiae, GI6321818, Length=300, Percent_Identity=36, Blast_Score=167, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003719 [H]

Pfam domain/function: PF02567 PhzC-PhzF [H]

EC number: NA

Molecular weight: Translated: 30691; Mature: 30560

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAARRAAHTVRFKQVDVFTSVPFKGNPLAVVFDADALSDADMLAIARWTNLSETAFLVA
CCCHHHHHHEEEEEEEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCEEEEEE
PSDPAADYRVRIFTTGGELPFAGHPTLGAAHAFLDAGAQPKAPGRLVQQCGAGLVELAKR
CCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHC
DGGWAFAAPSARVTPLAEREWPALAAALRTGAIDFGVPPRAVDNGAPWLVVRLASAADCL
CCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCEECCCCCCCCCCCCCEEEEEECCCCCEE
ALAPDHAALAPIVAALGAAGLAAYGPHPADGPATFEVRCLMTGDAFGAAGEDPVTGSANA
EECCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCH
AIAGVLAQAGRRPGRRYTARQGTVLGRDGRISVDYDDDAGKIWIGGAAVTLVDGTIRLR
HHHHHHHHHCCCCCCCEECCCCCEECCCCEEEEEECCCCCEEEECCEEEEEEECEEEEC
>Mature Secondary Structure 
AAARRAAHTVRFKQVDVFTSVPFKGNPLAVVFDADALSDADMLAIARWTNLSETAFLVA
CCHHHHHHEEEEEEEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCEEEEEE
PSDPAADYRVRIFTTGGELPFAGHPTLGAAHAFLDAGAQPKAPGRLVQQCGAGLVELAKR
CCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHC
DGGWAFAAPSARVTPLAEREWPALAAALRTGAIDFGVPPRAVDNGAPWLVVRLASAADCL
CCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCEECCCCCCCCCCCCCEEEEEECCCCCEE
ALAPDHAALAPIVAALGAAGLAAYGPHPADGPATFEVRCLMTGDAFGAAGEDPVTGSANA
EECCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCH
AIAGVLAQAGRRPGRRYTARQGTVLGRDGRISVDYDDDAGKIWIGGAAVTLVDGTIRLR
HHHHHHHHHCCCCCCCEECCCCCEECCCCEEEEEECCCCCEEEECCEEEEEEECEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]