| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718665
Identifier: 53718665
GI number: 53718665
Start: 1193265
End: 1194443
Strand: Reverse
Name: 53718665
Synonym: BPSL1025
Alternate gene names: NA
Gene position: 1194443-1193265 (Counterclockwise)
Preceding gene: 53718668
Following gene: 53718664
Centisome position: 29.31
GC content: 69.89
Gene sequence:
>1179_bases TTGAAACACGAACGTCGCGATTATCGCATGGGCATCCTCACGTCTGTCCTCGACGCAAGCGCCGCCGAGTGGGACGCGCT CGTCGCGCGCGCGCCGCGCCCGACGCCCTTCCTGAAGCACGCGTTCCTGAGCGCGCTGCACCGCGCCGGCTGCGCGACCG ACGGCACCGGCTGGACGCCGCGCTTCGTCACGCTCGCGGACAGTGCGACGGACGCGCTCGTCGCGGCCGCGCCCGTCTAT GCGAAGCGCCATTCGTATGGCGAATACGTGTTCGACTGGGCGTGGGCGGACGCGTACCAGCGCAACGGGCTGCCGTACTA CCCGAAGCTGCTGTGCGCGGTGCCGTTCACGCCCGTGCAGGGCAGCCGGCTCCTCGCCGTCGACGACGACTCGCGCCGCC GGCTCGCCGCGACGCTCGTCGCGCTCGCCGAGCAGAGCGACGTGTCGTCGCTGCACGTGCTGTTTCCGACGGGCGACGAG GCGCGCGCGCTCGCCGACATGGGGATGATGCTGCGCGAGGGCGTGCAATTCCACTGGCTGAACGACGGCTACCGCGACTT CGACGCGTTCCTCGGCACGCTCGAGCAGAAGAAGCGCAAGAACATCCGCGCGGAGCGCCGCAAGGTCGCGGACGCGGGCG TCACGCTGCGCCGCGTGCGCGGCGAGGACGCGACCGACGCCGATTGGCGCTTCTTCGCGCGCTGCTACCGGCAGACGTAC CGCGAGCACTTCTCGAGCCCGTATCTGAATCTCGAATTCTTCCGCGAGATCGGCGCGACGATGCCGGAGAACCTGCTGCT CGTGATCGCCGAGCGCGACGGGCGGCCGATCGCGAGCGCGCTCGCCGTCTACCAGCGCGGCGAGGCGGGCGGCGGCACGC TGTACGGCCGCTACTGGGGCGCGCTCGAACACGTGCCGTGCCTGCACTTCGAGACCGCGTACTACCAGTTGCTCGAATTC TGCATCGAAGAGCGGCTCGACACGTTCGAAGGCGGCGCGCAGGGCGAGCACAAGCTCGCACGCGGCTTCATGCCGACCGT CACGCATTCGGCGCACTGGCTCGCGCATCCGGCGTTCGCCGACGCGGTCGGGCACTTCCTCGCGCAGGAGACGAACCAGA TTCACGCGTACGTCGACGAGCTGCGCGAGCACAATCCGTTCAGGGCCGGCGAGCGCTGA
Upstream 100 bases:
>100_bases CTCGGGCCACGGCGCGAACGGCTTTGGCAAACGCACGGGCGGCGCGGCAGCGCGCGCAGCCGGCCGTGCAGACGGGTACG AACGAAACGGATTCGAATCG
Downstream 100 bases:
>100_bases GCCGGCCTTCGCGCCCGAGCGTGGAACCGGCGGACCGGGCGCGAACTGAACGCCCCACTCGCGTTCGGCTCGCGCCCGCG CTTGTGCCCGACTTGTGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MKHERRDYRMGILTSVLDASAAEWDALVARAPRPTPFLKHAFLSALHRAGCATDGTGWTPRFVTLADSATDALVAAAPVY AKRHSYGEYVFDWAWADAYQRNGLPYYPKLLCAVPFTPVQGSRLLAVDDDSRRRLAATLVALAEQSDVSSLHVLFPTGDE ARALADMGMMLREGVQFHWLNDGYRDFDAFLGTLEQKKRKNIRAERRKVADAGVTLRRVRGEDATDADWRFFARCYRQTY REHFSSPYLNLEFFREIGATMPENLLLVIAERDGRPIASALAVYQRGEAGGGTLYGRYWGALEHVPCLHFETAYYQLLEF CIEERLDTFEGGAQGEHKLARGFMPTVTHSAHWLAHPAFADAVGHFLAQETNQIHAYVDELREHNPFRAGER
Sequences:
>Translated_392_residues MKHERRDYRMGILTSVLDASAAEWDALVARAPRPTPFLKHAFLSALHRAGCATDGTGWTPRFVTLADSATDALVAAAPVY AKRHSYGEYVFDWAWADAYQRNGLPYYPKLLCAVPFTPVQGSRLLAVDDDSRRRLAATLVALAEQSDVSSLHVLFPTGDE ARALADMGMMLREGVQFHWLNDGYRDFDAFLGTLEQKKRKNIRAERRKVADAGVTLRRVRGEDATDADWRFFARCYRQTY REHFSSPYLNLEFFREIGATMPENLLLVIAERDGRPIASALAVYQRGEAGGGTLYGRYWGALEHVPCLHFETAYYQLLEF CIEERLDTFEGGAQGEHKLARGFMPTVTHSAHWLAHPAFADAVGHFLAQETNQIHAYVDELREHNPFRAGER >Mature_392_residues MKHERRDYRMGILTSVLDASAAEWDALVARAPRPTPFLKHAFLSALHRAGCATDGTGWTPRFVTLADSATDALVAAAPVY AKRHSYGEYVFDWAWADAYQRNGLPYYPKLLCAVPFTPVQGSRLLAVDDDSRRRLAATLVALAEQSDVSSLHVLFPTGDE ARALADMGMMLREGVQFHWLNDGYRDFDAFLGTLEQKKRKNIRAERRKVADAGVTLRRVRGEDATDADWRFFARCYRQTY REHFSSPYLNLEFFREIGATMPENLLLVIAERDGRPIASALAVYQRGEAGGGTLYGRYWGALEHVPCLHFETAYYQLLEF CIEERLDTFEGGAQGEHKLARGFMPTVTHSAHWLAHPAFADAVGHFLAQETNQIHAYVDELREHNPFRAGER
Specific function: Unknown
COG id: COG3146
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44304; Mature: 44304
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHERRDYRMGILTSVLDASAAEWDALVARAPRPTPFLKHAFLSALHRAGCATDGTGWTP CCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC RFVTLADSATDALVAAAPVYAKRHSYGEYVFDWAWADAYQRNGLPYYPKLLCAVPFTPVQ EEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCC GSRLLAVDDDSRRRLAATLVALAEQSDVSSLHVLFPTGDEARALADMGMMLREGVQFHWL CCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEC NDGYRDFDAFLGTLEQKKRKNIRAERRKVADAGVTLRRVRGEDATDADWRFFARCYRQTY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHH REHFSSPYLNLEFFREIGATMPENLLLVIAERDGRPIASALAVYQRGEAGGGTLYGRYWG HHHHCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEHHHHHH ALEHVPCLHFETAYYQLLEFCIEERLDTFEGGAQGEHKLARGFMPTVTHSAHWLAHPAFA HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHCCCCHHHCCHHHH DAVGHFLAQETNQIHAYVDELREHNPFRAGER HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKHERRDYRMGILTSVLDASAAEWDALVARAPRPTPFLKHAFLSALHRAGCATDGTGWTP CCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC RFVTLADSATDALVAAAPVYAKRHSYGEYVFDWAWADAYQRNGLPYYPKLLCAVPFTPVQ EEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCC GSRLLAVDDDSRRRLAATLVALAEQSDVSSLHVLFPTGDEARALADMGMMLREGVQFHWL CCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEC NDGYRDFDAFLGTLEQKKRKNIRAERRKVADAGVTLRRVRGEDATDADWRFFARCYRQTY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHH REHFSSPYLNLEFFREIGATMPENLLLVIAERDGRPIASALAVYQRGEAGGGTLYGRYWG HHHHCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEHHHHHH ALEHVPCLHFETAYYQLLEFCIEERLDTFEGGAQGEHKLARGFMPTVTHSAHWLAHPAFA HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHCCCCHHHCCHHHH DAVGHFLAQETNQIHAYVDELREHNPFRAGER HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA