Click here to switch to the map view.

The map label for this gene is yhbQ [C]

Identifier: 53718664

GI number: 53718664

Start: 1191502

End: 1192266

Strand: Reverse

Name: yhbQ [C]

Synonym: BPSL1022

Alternate gene names: 53718664

Gene position: 1192266-1191502 (Counterclockwise)

Preceding gene: 53718665

Following gene: 53718662

Centisome position: 29.26

GC content: 73.07

Gene sequence:

>765_bases
ATGTCCTGGTATCTGTATCTGATCGAGTGCGCGGACGGCAGCGTCTACACCGGCATCACGACCGACGTCGCCGCCCGCTT
CGACAAGCACGCGCAAGGCGCGGGCGCCCGCTACACGCGCGCGCGCAAGCCGCGCGCGGTGCTCGCGTCGTTCGAGCTCG
CCGATCGCTCGAGCGCGTCGCGCGCCGAGTATTGGGTGAAGCGGCTCACCGCCGTGCAGAAGCGCGAGCTGGCAGCGGGC
ACACGCACGCTCGAGTCGGTGCTGCCGGCGGCGGCCGGCGTGCGAAGCGATGCGGCGGCGGGGCGCGATGCGGGGGCCCA
GGTAGCTGCTGCGGCGGCGGCACAGAGGGAGGGCGCGCCCGTCACGGGGCGCGTGAAGCGCGTCGACGCCGAACGGGCGT
CGGGCACGCCGACGCCGCGCTCTCCTCGCCGCGCCACTCGGGCGACGGCCGAGGCGCTCGATGCGGGCACGCCGGCTGAC
GAGGGTGAGGCGACGCAAGCGCCAAAGGAAAGGAAGACGACGGAGGCTGCGAAAACTTCGAAGACGGTGAGATTGTCGAA
GGCACCGAAGCCGTCGACACCACCGAAGCCACCGAAGCCGTCGACGCAGATCGCGGCGACAGCCGCCTCCCGACGAACGA
AAACCGTCCGCGCGCCTGCGGCGAACACGACCGCGCGCGCGAACGCCTCCCCGAACGCGGGCACCGCCGTATCCGCCGCG
CCGCCGCGCGGCGCGCGCGCCAAACAAAACCGCGCGGCCTCGTGA

Upstream 100 bases:

>100_bases
GGCGCGGCGTCGAGCCGCTATCGCGACGAGCGCGGCGGCAAATGGCATTGAGCCGCGCGATTTCTGCGACACTGGCGGCT
TCGCGTCACGCCGCCCTTTC

Downstream 100 bases:

>100_bases
CGAGGCGCGCGCGGTTTCGCGTGACCCATGGGCGCCCCGGCGGGCGCCGCCCGGCGGCTTACTTCTTGAAGTTCGCGACG
CCGTCGGTGATTTCCTTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MSWYLYLIECADGSVYTGITTDVAARFDKHAQGAGARYTRARKPRAVLASFELADRSSASRAEYWVKRLTAVQKRELAAG
TRTLESVLPAAAGVRSDAAAGRDAGAQVAAAAAAQREGAPVTGRVKRVDAERASGTPTPRSPRRATRATAEALDAGTPAD
EGEATQAPKERKTTEAAKTSKTVRLSKAPKPSTPPKPPKPSTQIAATAASRRTKTVRAPAANTTARANASPNAGTAVSAA
PPRGARAKQNRAAS

Sequences:

>Translated_254_residues
MSWYLYLIECADGSVYTGITTDVAARFDKHAQGAGARYTRARKPRAVLASFELADRSSASRAEYWVKRLTAVQKRELAAG
TRTLESVLPAAAGVRSDAAAGRDAGAQVAAAAAAQREGAPVTGRVKRVDAERASGTPTPRSPRRATRATAEALDAGTPAD
EGEATQAPKERKTTEAAKTSKTVRLSKAPKPSTPPKPPKPSTQIAATAASRRTKTVRAPAANTTARANASPNAGTAVSAA
PPRGARAKQNRAAS
>Mature_253_residues
SWYLYLIECADGSVYTGITTDVAARFDKHAQGAGARYTRARKPRAVLASFELADRSSASRAEYWVKRLTAVQKRELAAGT
RTLESVLPAAAGVRSDAAAGRDAGAQVAAAAAAQREGAPVTGRVKRVDAERASGTPTPRSPRRATRATAEALDAGTPADE
GEATQAPKERKTTEAAKTSKTVRLSKAPKPSTPPKPPKPSTQIAATAASRRTKTVRAPAANTTARANASPNAGTAVSAAP
PRGARAKQNRAAS

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family [H]

Homologues:

Organism=Escherichia coli, GI1789545, Length=77, Percent_Identity=49.3506493506493, Blast_Score=75, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000305 [H]

Pfam domain/function: PF01541 GIY-YIG [H]

EC number: NA

Molecular weight: Translated: 26355; Mature: 26223

Theoretical pI: Translated: 11.60; Mature: 11.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWYLYLIECADGSVYTGITTDVAARFDKHAQGAGARYTRARKPRAVLASFELADRSSAS
CCEEEEEEEECCCCEEECHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHCCCCHH
RAEYWVKRLTAVQKRELAAGTRTLESVLPAAAGVRSDAAAGRDAGAQVAAAAAAQREGAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHCCCC
VTGRVKRVDAERASGTPTPRSPRRATRATAEALDAGTPADEGEATQAPKERKTTEAAKTS
CCCHHEECCCHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
KTVRLSKAPKPSTPPKPPKPSTQIAATAASRRTKTVRAPAANTTARANASPNAGTAVSAA
CEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCEECCC
PPRGARAKQNRAAS
CCCCCCCCCCCCCC
>Mature Secondary Structure 
SWYLYLIECADGSVYTGITTDVAARFDKHAQGAGARYTRARKPRAVLASFELADRSSAS
CEEEEEEEECCCCEEECHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHCCCCHH
RAEYWVKRLTAVQKRELAAGTRTLESVLPAAAGVRSDAAAGRDAGAQVAAAAAAQREGAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHCCCC
VTGRVKRVDAERASGTPTPRSPRRATRATAEALDAGTPADEGEATQAPKERKTTEAAKTS
CCCHHEECCCHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
KTVRLSKAPKPSTPPKPPKPSTQIAATAASRRTKTVRAPAANTTARANASPNAGTAVSAA
CEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCEECCC
PPRGARAKQNRAAS
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA