Click here to switch to the map view.

The map label for this gene is ttuB [H]

Identifier: 53718660

GI number: 53718660

Start: 1187123

End: 1188430

Strand: Reverse

Name: ttuB [H]

Synonym: BPSL1018

Alternate gene names: 53718660

Gene position: 1188430-1187123 (Counterclockwise)

Preceding gene: 53718661

Following gene: 53718655

Centisome position: 29.17

GC content: 67.66

Gene sequence:

>1308_bases
ATGGCCAGCACCCTGCCCGCGACCACGCCGGACGCGCCGTCCGCCTTCGAGGCGGCCACCTATCGCAAGGTTTCGTGGCG
GCTCGCGCCGCTGTTGCTGCTCTGCTACGTGGTCGCTTATCTCGACCGCGTGAACGTCGGCTTCGCCAAGCTGCAGATGG
CGGCCGACCTGCACCTGTCCGATGCGGTCTACGGCCTCGGCGCCGGAATCTTCTTCATCGGCTATTTTCTGTTCGAAGTG
CCGAGCAACGTGATCCTGCACAAGGTGGGCGCGCGCGTGTGGATCGCGCGGATCATGGTCACGTGGGGCATCATCTCGGC
GCTGACGATGTTCGTGTCGACGCCCGCGATGTTCTACACGATGCGCTTCCTGCTCGGCGTCGCGGAAGCGGGTTTCTTCC
CCGGCGTGATTCTCTACCTCACCTACTGGTATCCGGCGCACCGCCGCGGCAGGATGACGACGCTGTTCATGACGGCCGTC
GCGCTGTCGGGCGTCGTCGGCGGGCCGATCTCCGGCTACATCCTGAAGACGTTCGACGGCATGAACGGCTGGCGCGGCTG
GCAGTGGCTGTTCCTGCTCGAAGGCGTGCCGTCGGTGCTCGTCGGCATCCTGCTGCTGTTCGCGCTCGACGACGGAATCG
CGAAGGCGAAATGGCTCGACGGCGACGAAAAGGCGCTGCTGTCGCGCAACGTCGCCGCCGAGGAGGCGCGCAAGGAAGAC
CTGCCGCTTTCCGCCGTGTTCGCGAGCCCGCGCGTGTGGCTGATGGGCTTCATCTACTTCTCGTTCGTGATGGGGCTCTA
CGGCGTCGGCTTCTGGCTGCCGACGATCATCAAATCGACGGGCGTGACCGACGCGTTCGCGATCGGCCTTCTGTCCGCCG
TGCCGTACGCGGCGGCCGTCGTCGCGATGCTCGCGGTCGCGCGCAGCGCGGACCGCCGCCGCGAGCGGCGCTGGCATCTC
GCGATTCCGGCGGCGGCGGGCGCGCTCGGGCTCGTGCTGTCGGTCGTCTGGGCGCACGACACCTTGCTCGCGATGCTCGG
CCTGACGATCGCAACGATGGGCATCCTGACGACGCTGCCGCTCTTCTGGAGCCTGCCGACCGCGTTCCTCGGCGGCACGG
CCGCCGCCGCGGGCATCGCGATCATCAATTCGGTCGGCAATCTCGCGGGCTTCCTGAGCCCGTACCTCGTCGGCTGGCTC
AAGCAGGCGAGCGCGTCGAACGCGGCGGGGATGTACATGCTCGCCGGTTTCCTCGTGCTGGGCGGGCTGCTCGCGCTCAC
GGTGCCCAAATCGCTCGTCGACATCTGA

Upstream 100 bases:

>100_bases
CCGACGAAGCCGCGTTCGTCACCGGCGCGTGCCTCGAAGTCGACGGCGGCCGCTGCGTCTGAGCGCCGCGCGATTCCCCC
ACACACGAGAGGAGACGTTC

Downstream 100 bases:

>100_bases
TTCGGCGCCCGGGCGCCGACACTCGATACGGCGTGCGGGCAGCACGATGCGCGGCGCGGCGCCCCAACGAAAACGGCGGC
CCGCGAGGCCGCCGTTTCTT

Product: putative permease transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 434

Protein sequence:

>435_residues
MASTLPATTPDAPSAFEAATYRKVSWRLAPLLLLCYVVAYLDRVNVGFAKLQMAADLHLSDAVYGLGAGIFFIGYFLFEV
PSNVILHKVGARVWIARIMVTWGIISALTMFVSTPAMFYTMRFLLGVAEAGFFPGVILYLTYWYPAHRRGRMTTLFMTAV
ALSGVVGGPISGYILKTFDGMNGWRGWQWLFLLEGVPSVLVGILLLFALDDGIAKAKWLDGDEKALLSRNVAAEEARKED
LPLSAVFASPRVWLMGFIYFSFVMGLYGVGFWLPTIIKSTGVTDAFAIGLLSAVPYAAAVVAMLAVARSADRRRERRWHL
AIPAAAGALGLVLSVVWAHDTLLAMLGLTIATMGILTTLPLFWSLPTAFLGGTAAAAGIAIINSVGNLAGFLSPYLVGWL
KQASASNAAGMYMLAGFLVLGGLLALTVPKSLVDI

Sequences:

>Translated_435_residues
MASTLPATTPDAPSAFEAATYRKVSWRLAPLLLLCYVVAYLDRVNVGFAKLQMAADLHLSDAVYGLGAGIFFIGYFLFEV
PSNVILHKVGARVWIARIMVTWGIISALTMFVSTPAMFYTMRFLLGVAEAGFFPGVILYLTYWYPAHRRGRMTTLFMTAV
ALSGVVGGPISGYILKTFDGMNGWRGWQWLFLLEGVPSVLVGILLLFALDDGIAKAKWLDGDEKALLSRNVAAEEARKED
LPLSAVFASPRVWLMGFIYFSFVMGLYGVGFWLPTIIKSTGVTDAFAIGLLSAVPYAAAVVAMLAVARSADRRRERRWHL
AIPAAAGALGLVLSVVWAHDTLLAMLGLTIATMGILTTLPLFWSLPTAFLGGTAAAAGIAIINSVGNLAGFLSPYLVGWL
KQASASNAAGMYMLAGFLVLGGLLALTVPKSLVDI
>Mature_434_residues
ASTLPATTPDAPSAFEAATYRKVSWRLAPLLLLCYVVAYLDRVNVGFAKLQMAADLHLSDAVYGLGAGIFFIGYFLFEVP
SNVILHKVGARVWIARIMVTWGIISALTMFVSTPAMFYTMRFLLGVAEAGFFPGVILYLTYWYPAHRRGRMTTLFMTAVA
LSGVVGGPISGYILKTFDGMNGWRGWQWLFLLEGVPSVLVGILLLFALDDGIAKAKWLDGDEKALLSRNVAAEEARKEDL
PLSAVFASPRVWLMGFIYFSFVMGLYGVGFWLPTIIKSTGVTDAFAIGLLSAVPYAAAVVAMLAVARSADRRRERRWHLA
IPAAAGALGLVLSVVWAHDTLLAMLGLTIATMGILTTLPLFWSLPTAFLGGTAAAAGIAIINSVGNLAGFLSPYLVGWLK
QASASNAAGMYMLAGFLVLGGLLALTVPKSLVDI

Specific function: Component of the tartrate utilization system and may allow entry of tartrate and tartrate dehydrogenase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Homo sapiens, GI6912666, Length=349, Percent_Identity=21.2034383954155, Blast_Score=71, Evalue=2e-12,
Organism=Escherichia coli, GI87082071, Length=416, Percent_Identity=37.5, Blast_Score=265, Evalue=4e-72,
Organism=Escherichia coli, GI2367379, Length=322, Percent_Identity=23.9130434782609, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1789152, Length=434, Percent_Identity=22.3502304147465, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI87082320, Length=415, Percent_Identity=22.4096385542169, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1789515, Length=410, Percent_Identity=22.1951219512195, Blast_Score=65, Evalue=9e-12,
Organism=Saccharomyces cerevisiae, GI6321698, Length=362, Percent_Identity=24.0331491712707, Blast_Score=90, Evalue=8e-19,
Organism=Saccharomyces cerevisiae, GI6322025, Length=216, Percent_Identity=25, Blast_Score=79, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6319876, Length=321, Percent_Identity=23.0529595015576, Blast_Score=74, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6322612, Length=228, Percent_Identity=25, Blast_Score=69, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6324410, Length=150, Percent_Identity=23.3333333333333, Blast_Score=66, Evalue=9e-12,
Organism=Saccharomyces cerevisiae, GI6319250, Length=256, Percent_Identity=21.484375, Blast_Score=64, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24584153, Length=355, Percent_Identity=22.2535211267606, Blast_Score=86, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24583789, Length=384, Percent_Identity=23.4375, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24654215, Length=375, Percent_Identity=22.6666666666667, Blast_Score=66, Evalue=5e-11,
Organism=Drosophila melanogaster, GI19922400, Length=375, Percent_Identity=22.6666666666667, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24648416, Length=295, Percent_Identity=24.0677966101695, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI21356189, Length=295, Percent_Identity=24.0677966101695, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24653727, Length=401, Percent_Identity=21.6957605985037, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004744
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 46751; Mature: 46620

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: PS00778 HIS_ACID_PHOSPHAT_2 ; PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHCCHHHHCC
>Mature Secondary Structure 
ASTLPATTPDAPSAFEAATYRKVSWRLAPLLLLCYVVAYLDRVNVGFAKLQMAADLHLS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH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HHHHHHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7592429 [H]