| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718614
Identifier: 53718614
GI number: 53718614
Start: 1130741
End: 1131478
Strand: Reverse
Name: 53718614
Synonym: BPSL0972
Alternate gene names: NA
Gene position: 1131478-1130741 (Counterclockwise)
Preceding gene: 53718615
Following gene: 53718611
Centisome position: 27.77
GC content: 69.51
Gene sequence:
>738_bases ATGACGAAAAAATCCGCTCTTGCCGTTGCCGTCACGCTCGCGGCGGCGCTGCCGATCGCGCTCGCGCTCGCCCCGTCCGC CGCGCGCGCGCAAAGCATGGGGCAGATGCAGCCGCCCGCGGGCGTGCTGTCGCTGTCCGCGCAGGCGAGCACCGACGTCC CGCAGGACGTCGTCGATATCACGCTGTTCTACGAACAACAGGCGAAGGACCCGGGCACGCTGACCGCGGAGCTGAACAAG CGCGCGGATACGGCGCTCGCGCAGGCGCGCGGGGTCACGGGCGTCACGGCCCGCACGGGCGAATTCTCGGTGTCGCCGAG CGTCGATCGCGACGGCAAGATCTCCGCGTGGCGCGGCCGCACCGAGGTCGTGCTCGAGTCGCACGACTTCGCGGCCGCAT CGAAGCTCGCCGGCCAGTTGAGCCCGATGATGCAGGTGGGCAACGTGTCGTTCTCGCTGTCGCCCGAGGCGCAGCGCGCC GCCGAGCAGAAACTCACGTCGGAGGCGATCAAGGCGTTCCGCGCGCGCGCCGAGGAAGCGACGCGCGCGTTCGGCTACAG CAACTACTCGATCCGCGAGGTGAACGTCGGCAGCGGCCGCAACGTGCAGCCGTACCCGCGGATGTTCGCGATGGCCGCGC CCGCGATGGACAGTGCGAAGATGAGCGCGCCGATCGCCGTCGAAGGCGGCAAGACGACCGTGACCGTCAATGTGAACGGC TCGGTGCAGATGAAGTGA
Upstream 100 bases:
>100_bases TGCCGTGCCGCGTTCGCCGGGCGTTTCGAGGAAAGCGCGGCGTCCGTCCGCGCGCCGCACGCCCTCAAGCGCGTGCGCGC TTACGCTCAAGGAGTCAACA
Downstream 100 bases:
>100_bases CACACGTCGGCGCGGCGCGTTTGCGCCTCGCGATCGATGCAAAACGCCGGCGATGCGCCGGCGTTTTTTCTTGGGGGCCG TGTGCGTCGGGATTCGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MTKKSALAVAVTLAAALPIALALAPSAARAQSMGQMQPPAGVLSLSAQASTDVPQDVVDITLFYEQQAKDPGTLTAELNK RADTALAQARGVTGVTARTGEFSVSPSVDRDGKISAWRGRTEVVLESHDFAAASKLAGQLSPMMQVGNVSFSLSPEAQRA AEQKLTSEAIKAFRARAEEATRAFGYSNYSIREVNVGSGRNVQPYPRMFAMAAPAMDSAKMSAPIAVEGGKTTVTVNVNG SVQMK
Sequences:
>Translated_245_residues MTKKSALAVAVTLAAALPIALALAPSAARAQSMGQMQPPAGVLSLSAQASTDVPQDVVDITLFYEQQAKDPGTLTAELNK RADTALAQARGVTGVTARTGEFSVSPSVDRDGKISAWRGRTEVVLESHDFAAASKLAGQLSPMMQVGNVSFSLSPEAQRA AEQKLTSEAIKAFRARAEEATRAFGYSNYSIREVNVGSGRNVQPYPRMFAMAAPAMDSAKMSAPIAVEGGKTTVTVNVNG SVQMK >Mature_244_residues TKKSALAVAVTLAAALPIALALAPSAARAQSMGQMQPPAGVLSLSAQASTDVPQDVVDITLFYEQQAKDPGTLTAELNKR ADTALAQARGVTGVTARTGEFSVSPSVDRDGKISAWRGRTEVVLESHDFAAASKLAGQLSPMMQVGNVSFSLSPEAQRAA EQKLTSEAIKAFRARAEEATRAFGYSNYSIREVNVGSGRNVQPYPRMFAMAAPAMDSAKMSAPIAVEGGKTTVTVNVNGS VQMK
Specific function: Unknown
COG id: COG3471
COG function: function code S; Predicted periplasmic/secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25633; Mature: 25502
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKSALAVAVTLAAALPIALALAPSAARAQSMGQMQPPAGVLSLSAQASTDVPQDVVDI CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHEE TLFYEQQAKDPGTLTAELNKRADTALAQARGVTGVTARTGEFSVSPSVDRDGKISAWRGR EEEEHHHCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEECCCEECCCCCCCCCCEEEECCC TEVVLESHDFAAASKLAGQLSPMMQVGNVSFSLSPEAQRAAEQKLTSEAIKAFRARAEEA EEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH TRAFGYSNYSIREVNVGSGRNVQPYPRMFAMAAPAMDSAKMSAPIAVEGGKTTVTVNVNG HHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEECCCEEEEEEECC SVQMK EEEEC >Mature Secondary Structure TKKSALAVAVTLAAALPIALALAPSAARAQSMGQMQPPAGVLSLSAQASTDVPQDVVDI CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHEE TLFYEQQAKDPGTLTAELNKRADTALAQARGVTGVTARTGEFSVSPSVDRDGKISAWRGR EEEEHHHCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEECCCEECCCCCCCCCCEEEECCC TEVVLESHDFAAASKLAGQLSPMMQVGNVSFSLSPEAQRAAEQKLTSEAIKAFRARAEEA EEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH TRAFGYSNYSIREVNVGSGRNVQPYPRMFAMAAPAMDSAKMSAPIAVEGGKTTVTVNVNG HHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEECCCEEEEEEECC SVQMK EEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA