Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

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The map label for this gene is 53718596

Identifier: 53718596

GI number: 53718596

Start: 1112425

End: 1112763

Strand: Reverse

Name: 53718596

Synonym: BPSL0954

Alternate gene names: NA

Gene position: 1112763-1112425 (Counterclockwise)

Preceding gene: 53718597

Following gene: 53718595

Centisome position: 27.31

GC content: 74.63

Gene sequence:

>339_bases
GTGACGCGCGCCGCTGGAGGACCGTGCCGCGCGCACCGATCGGACGGTCGGCGTCGAGCTGTCGACGCCCCCCGGCCCGG
CGCACGCCGACAACCGCGCAGCCGGGCGCTCAGGCGTTCCGCACGGCACCGCGCGGCGCTCGAGTACGCGCACGGGCTCG
TCGTGCCCAACGGTATCGTCGCCCCGAGCGCCGCCGATCGCGTCGGGCTCGATCAGCGAGTCGGCATCATGGGCGTCGTG
AAACACGGCGCGCTCGTCTATTCGGGCCCGTGCCCCGACGGGCCACGCCGCGCGGCCGTCGCGGCAGCGGACGCTTGCCC
GCATGGAAGATTTCGGTAA

Upstream 100 bases:

>100_bases
TGCGCGGCTATATCTATACGCTCGTCGAGCTGCTGTCGCCGACGCTCAATCGCAAGCTCGTCGAAACGGCGCTCAAGGGC
GAGGCCGAAACCTACGAGCT

Downstream 100 bases:

>100_bases
TAATTTGCGTTTTCGCCGTGCGCAATCGCATGCACGGCGCAGGTTGGCCCAGGTGGTGAAATTGGTAGACGCAGGGGACT
CAAAATCCCCCGCCGCAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MTRAAGGPCRAHRSDGRRRAVDAPRPGARRQPRSRALRRSARHRAALEYAHGLVVPNGIVAPSAADRVGLDQRVGIMGVV
KHGALVYSGPCPDGPRRAAVAAADACPHGRFR

Sequences:

>Translated_112_residues
MTRAAGGPCRAHRSDGRRRAVDAPRPGARRQPRSRALRRSARHRAALEYAHGLVVPNGIVAPSAADRVGLDQRVGIMGVV
KHGALVYSGPCPDGPRRAAVAAADACPHGRFR
>Mature_111_residues
TRAAGGPCRAHRSDGRRRAVDAPRPGARRQPRSRALRRSARHRAALEYAHGLVVPNGIVAPSAADRVGLDQRVGIMGVVK
HGALVYSGPCPDGPRRAAVAAADACPHGRFR

Specific function: Unknown

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11873; Mature: 11742

Theoretical pI: Translated: 12.29; Mature: 12.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRAAGGPCRAHRSDGRRRAVDAPRPGARRQPRSRALRRSARHRAALEYAHGLVVPNGIV
CCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
APSAADRVGLDQRVGIMGVVKHGALVYSGPCPDGPRRAAVAAADACPHGRFR
CCCCCCCCCCCCCCCHHEEECCCCEEEECCCCCCCCCHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TRAAGGPCRAHRSDGRRRAVDAPRPGARRQPRSRALRRSARHRAALEYAHGLVVPNGIV
CCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
APSAADRVGLDQRVGIMGVVKHGALVYSGPCPDGPRRAAVAAADACPHGRFR
CCCCCCCCCCCCCCCHHEEECCCCEEEECCCCCCCCCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA