| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
Click here to switch to the map view.
The map label for this gene is 53718596
Identifier: 53718596
GI number: 53718596
Start: 1112425
End: 1112763
Strand: Reverse
Name: 53718596
Synonym: BPSL0954
Alternate gene names: NA
Gene position: 1112763-1112425 (Counterclockwise)
Preceding gene: 53718597
Following gene: 53718595
Centisome position: 27.31
GC content: 74.63
Gene sequence:
>339_bases GTGACGCGCGCCGCTGGAGGACCGTGCCGCGCGCACCGATCGGACGGTCGGCGTCGAGCTGTCGACGCCCCCCGGCCCGG CGCACGCCGACAACCGCGCAGCCGGGCGCTCAGGCGTTCCGCACGGCACCGCGCGGCGCTCGAGTACGCGCACGGGCTCG TCGTGCCCAACGGTATCGTCGCCCCGAGCGCCGCCGATCGCGTCGGGCTCGATCAGCGAGTCGGCATCATGGGCGTCGTG AAACACGGCGCGCTCGTCTATTCGGGCCCGTGCCCCGACGGGCCACGCCGCGCGGCCGTCGCGGCAGCGGACGCTTGCCC GCATGGAAGATTTCGGTAA
Upstream 100 bases:
>100_bases TGCGCGGCTATATCTATACGCTCGTCGAGCTGCTGTCGCCGACGCTCAATCGCAAGCTCGTCGAAACGGCGCTCAAGGGC GAGGCCGAAACCTACGAGCT
Downstream 100 bases:
>100_bases TAATTTGCGTTTTCGCCGTGCGCAATCGCATGCACGGCGCAGGTTGGCCCAGGTGGTGAAATTGGTAGACGCAGGGGACT CAAAATCCCCCGCCGCAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MTRAAGGPCRAHRSDGRRRAVDAPRPGARRQPRSRALRRSARHRAALEYAHGLVVPNGIVAPSAADRVGLDQRVGIMGVV KHGALVYSGPCPDGPRRAAVAAADACPHGRFR
Sequences:
>Translated_112_residues MTRAAGGPCRAHRSDGRRRAVDAPRPGARRQPRSRALRRSARHRAALEYAHGLVVPNGIVAPSAADRVGLDQRVGIMGVV KHGALVYSGPCPDGPRRAAVAAADACPHGRFR >Mature_111_residues TRAAGGPCRAHRSDGRRRAVDAPRPGARRQPRSRALRRSARHRAALEYAHGLVVPNGIVAPSAADRVGLDQRVGIMGVVK HGALVYSGPCPDGPRRAAVAAADACPHGRFR
Specific function: Unknown
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11873; Mature: 11742
Theoretical pI: Translated: 12.29; Mature: 12.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRAAGGPCRAHRSDGRRRAVDAPRPGARRQPRSRALRRSARHRAALEYAHGLVVPNGIV CCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC APSAADRVGLDQRVGIMGVVKHGALVYSGPCPDGPRRAAVAAADACPHGRFR CCCCCCCCCCCCCCCHHEEECCCCEEEECCCCCCCCCHHHHHCCCCCCCCCC >Mature Secondary Structure TRAAGGPCRAHRSDGRRRAVDAPRPGARRQPRSRALRRSARHRAALEYAHGLVVPNGIV CCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC APSAADRVGLDQRVGIMGVVKHGALVYSGPCPDGPRRAAVAAADACPHGRFR CCCCCCCCCCCCCCCHHEEECCCCEEEECCCCCCCCCHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA