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The map label for this gene is yagA [C]

Identifier: 53718586

GI number: 53718586

Start: 1099585

End: 1100412

Strand: Reverse

Name: yagA [C]

Synonym: BPSL0943

Alternate gene names: 53718586

Gene position: 1100412-1099585 (Counterclockwise)

Preceding gene: 53718588

Following gene: 53718579

Centisome position: 27.01

GC content: 61.11

Gene sequence:

>828_bases
ATGACCGAACGCACCATGGGTGTTACCCGGGCCTGCGGGCTGGTAGGGATTTCGCGCTCGCTGTTGCACTACGAATCACG
CCGCCGAGTTGACGACGAAGCGCTGACTGGCCGGATGATGGCCATCGCCGCGCAGAAGCGTCGTTACGGCTATCGCCGGA
TTCACGTGTTGTTGCAGCGGGATGGCTGCTTCGCCAACCACAAGCGCATCTGGCGCCTGTACAGCAAGGCGGGACTGAGC
GTGCGCAAGCGGCGACGCAAGCGTATTGCGGCTGTCGAGCGCACGCCGCTGCCGTTGCCAACAGGCCCGAATCAGAGCTG
GTCGATGGACTTCGTTTCTGACGGGTTGGCCTATGGTCGGCGGTTTCGATGCCTGAACGTGGTCGACGACTACACGCGCG
AGTGCTTGGCCATCGAGGTCGATACTTCGCTGCCGGGCCTACGAGTGCAGCAAGTGCTCGCGCGGCTCAAGGAGATGCGA
GGCTTGCCCGCATCCATCACGGTCGACAACGGGCCGGAGTTCGCTGGTAAGGTGCTGGATGCATGGGCCTACGAAGCCGG
CGTCACGCTGTCGTTCATTCGGCCTGGCAAACCGGTGGAAAATGCCTATATCGAGAGCTTCAACGGGCGCTTCCGCGACG
AATGCCTGAACGAGCACTGGTTCGTCTCAATGCGCCACGCCAAGCAGCTGATTGAGGAATGGCGTATCGAGTACAACACC
GAGCGGCCTCATAGTTCGCTCGGCTATCTGACGCCTGCGCAGTTCGCTCGGGCGCACGATGCAAAGCAGCAGTTTTTAAC
CTCGGACTCAAACTGCAGTTCGGACTAA

Upstream 100 bases:

>100_bases
CAAGTGGGGCCGAATCAATGCTAGACAACGCCGCGCGGAAGGAGCTGTTGGCCCGAAAGTAGCAAGCCCGCAGGCCAAGC
GCGAAGCGGTCCGAATCTTG

Downstream 100 bases:

>100_bases
AACCGGGGGCAGGTCACCGCTCGGTCGAGATAGCGTCAGTTCTCCAGCGCTAAGCGAACAAGCTTCTCCAGAATGCTCAT
TTTCGAGTTATCGCCAGCAA

Product: putative insertion element protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MTERTMGVTRACGLVGISRSLLHYESRRRVDDEALTGRMMAIAAQKRRYGYRRIHVLLQRDGCFANHKRIWRLYSKAGLS
VRKRRRKRIAAVERTPLPLPTGPNQSWSMDFVSDGLAYGRRFRCLNVVDDYTRECLAIEVDTSLPGLRVQQVLARLKEMR
GLPASITVDNGPEFAGKVLDAWAYEAGVTLSFIRPGKPVENAYIESFNGRFRDECLNEHWFVSMRHAKQLIEEWRIEYNT
ERPHSSLGYLTPAQFARAHDAKQQFLTSDSNCSSD

Sequences:

>Translated_275_residues
MTERTMGVTRACGLVGISRSLLHYESRRRVDDEALTGRMMAIAAQKRRYGYRRIHVLLQRDGCFANHKRIWRLYSKAGLS
VRKRRRKRIAAVERTPLPLPTGPNQSWSMDFVSDGLAYGRRFRCLNVVDDYTRECLAIEVDTSLPGLRVQQVLARLKEMR
GLPASITVDNGPEFAGKVLDAWAYEAGVTLSFIRPGKPVENAYIESFNGRFRDECLNEHWFVSMRHAKQLIEEWRIEYNT
ERPHSSLGYLTPAQFARAHDAKQQFLTSDSNCSSD
>Mature_274_residues
TERTMGVTRACGLVGISRSLLHYESRRRVDDEALTGRMMAIAAQKRRYGYRRIHVLLQRDGCFANHKRIWRLYSKAGLSV
RKRRRKRIAAVERTPLPLPTGPNQSWSMDFVSDGLAYGRRFRCLNVVDDYTRECLAIEVDTSLPGLRVQQVLARLKEMRG
LPASITVDNGPEFAGKVLDAWAYEAGVTLSFIRPGKPVENAYIESFNGRFRDECLNEHWFVSMRHAKQLIEEWRIEYNTE
RPHSSLGYLTPAQFARAHDAKQQFLTSDSNCSSD

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1786462, Length=156, Percent_Identity=30.7692307692308, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1789981, Length=254, Percent_Identity=26.7716535433071, Blast_Score=71, Evalue=7e-14,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 31586; Mature: 31455

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTERTMGVTRACGLVGISRSLLHYESRRRVDDEALTGRMMAIAAQKRRYGYRRIHVLLQR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHEEEEEEC
DGCFANHKRIWRLYSKAGLSVRKRRRKRIAAVERTPLPLPTGPNQSWSMDFVSDGLAYGR
CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
RFRCLNVVDDYTRECLAIEVDTSLPGLRVQQVLARLKEMRGLPASITVDNGPEFAGKVLD
HHEEHHHHHHHCHHEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHH
AWAYEAGVTLSFIRPGKPVENAYIESFNGRFRDECLNEHWFVSMRHAKQLIEEWRIEYNT
HHHHHCCCEEEEECCCCCHHHHHHHHCCCCHHHHHCCCHHEEEHHHHHHHHHHHHHCCCC
ERPHSSLGYLTPAQFARAHDAKQQFLTSDSNCSSD
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TERTMGVTRACGLVGISRSLLHYESRRRVDDEALTGRMMAIAAQKRRYGYRRIHVLLQR
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHEEEEEEC
DGCFANHKRIWRLYSKAGLSVRKRRRKRIAAVERTPLPLPTGPNQSWSMDFVSDGLAYGR
CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
RFRCLNVVDDYTRECLAIEVDTSLPGLRVQQVLARLKEMRGLPASITVDNGPEFAGKVLD
HHEEHHHHHHHCHHEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHH
AWAYEAGVTLSFIRPGKPVENAYIESFNGRFRDECLNEHWFVSMRHAKQLIEEWRIEYNT
HHHHHCCCEEEEECCCCCHHHHHHHHCCCCHHHHHCCCHHEEEHHHHHHHHHHHHHCCCC
ERPHSSLGYLTPAQFARAHDAKQQFLTSDSNCSSD
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1718819 [H]