The gene/protein map for NC_003106 is currently unavailable.
Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

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The map label for this gene is yajQ [C]

Identifier: 53718506

GI number: 53718506

Start: 1007313

End: 1007798

Strand: Reverse

Name: yajQ [C]

Synonym: BPSL0867

Alternate gene names: 53718506

Gene position: 1007798-1007313 (Counterclockwise)

Preceding gene: 53718508

Following gene: 53718503

Centisome position: 24.73

GC content: 59.05

Gene sequence:

>486_bases
ATGCCATCGTTCGACGTCGTTTCCGAAGCGAACATGATCGAAGTGAAAAACGCAGTCGAGCAGTCGAACAAGGAAATTTC
GACCCGCTTCGACTTCAAGGGCTCCGACGCGCGCGTCGAGCAGAAGGAGCGCGAGCTCACGCTCTACGCCGACGACGACT
TCAAGCTCGGCCAGGTCAAGGACGTGCTGATCGGCAAGATGGCCAAGCGCAATGTCGACGTGCGCTTTCTCGACTACGGC
AAGATCGAGAAGATCGGCGGCGACAAGGTCAAGCAGGTCGTGACGATCAAGAAAGGCGTGTCGGGCGACCTCGCGAAAAA
AGTCGTGCGCATCGTGAAGGACAGCAAGATCAAGGTGCAGGCGAGCATCCAGGGCGACGCGGTGCGCGTGTCCGGCGCGA
AGCGCGACGATCTGCAAAGCACGATCGCACTGCTGCGCAAGGAAGTGACCGATACGCCGCTCGATTTCAACAACTTCCGC
GACTGA

Upstream 100 bases:

>100_bases
TTGGGCAAATGTAGGGGCGCCGGTAAAATGGCGGTCAGTCCGCAATTATAGCGAGTGCCCATGCGCAGGCCGCGTGCGGC
ACGCTCTACAGGAGAATGCC

Downstream 100 bases:

>100_bases
CGCGCGCACAGGCGCGGCGCACGCAAGGCCGCACGCGCCGATCGAGCGCCGGCCGCTCGCGCTTGTCGACGGCGCACGCA
AAGCTCGAACGCAGCGCAAT

Product: putative nucleotide-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MPSFDVVSEANMIEVKNAVEQSNKEISTRFDFKGSDARVEQKERELTLYADDDFKLGQVKDVLIGKMAKRNVDVRFLDYG
KIEKIGGDKVKQVVTIKKGVSGDLAKKVVRIVKDSKIKVQASIQGDAVRVSGAKRDDLQSTIALLRKEVTDTPLDFNNFR
D

Sequences:

>Translated_161_residues
MPSFDVVSEANMIEVKNAVEQSNKEISTRFDFKGSDARVEQKERELTLYADDDFKLGQVKDVLIGKMAKRNVDVRFLDYG
KIEKIGGDKVKQVVTIKKGVSGDLAKKVVRIVKDSKIKVQASIQGDAVRVSGAKRDDLQSTIALLRKEVTDTPLDFNNFR
D
>Mature_160_residues
PSFDVVSEANMIEVKNAVEQSNKEISTRFDFKGSDARVEQKERELTLYADDDFKLGQVKDVLIGKMAKRNVDVRFLDYGK
IEKIGGDKVKQVVTIKKGVSGDLAKKVVRIVKDSKIKVQASIQGDAVRVSGAKRDDLQSTIALLRKEVTDTPLDFNNFRD

Specific function: Unknown

COG id: COG1666

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0234 family

Homologues:

Organism=Escherichia coli, GI87081737, Length=163, Percent_Identity=39.2638036809816, Blast_Score=121, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1071_BURP1 (Q3JVC0)

Other databases:

- EMBL:   CP000124
- RefSeq:   YP_332483.1
- ProteinModelPortal:   Q3JVC0
- SMR:   Q3JVC0
- STRING:   Q3JVC0
- GeneID:   3688878
- GenomeReviews:   CP000124_GR
- KEGG:   bpm:BURPS1710b_1071
- TIGR:   BURPS1710b_1071
- eggNOG:   COG1666
- HOGENOM:   HBG290634
- OMA:   LQFTNYR
- ProtClustDB:   PRK05412
- BioCyc:   BPSE320372:BURPS1710B_A1130-MONOMER
- HAMAP:   MF_00632
- InterPro:   IPR007551

Pfam domain/function: PF04461 DUF520

EC number: NA

Molecular weight: Translated: 18036; Mature: 17905

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSFDVVSEANMIEVKNAVEQSNKEISTRFDFKGSDARVEQKERELTLYADDDFKLGQVK
CCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHH
DVLIGKMAKRNVDVRFLDYGKIEKIGGDKVKQVVTIKKGVSGDLAKKVVRIVKDSKIKVQ
HHHHHHHHHCCCCEEEECCCCEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEE
ASIQGDAVRVSGAKRDDLQSTIALLRKEVTDTPLDFNNFRD
EEECCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
PSFDVVSEANMIEVKNAVEQSNKEISTRFDFKGSDARVEQKERELTLYADDDFKLGQVK
CCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHH
DVLIGKMAKRNVDVRFLDYGKIEKIGGDKVKQVVTIKKGVSGDLAKKVVRIVKDSKIKVQ
HHHHHHHHHCCCCEEEECCCCEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEE
ASIQGDAVRVSGAKRDDLQSTIALLRKEVTDTPLDFNNFRD
EEECCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA