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The map label for this gene is glxA [H]

Identifier: 53718457

GI number: 53718457

Start: 952965

End: 953999

Strand: Reverse

Name: glxA [H]

Synonym: BPSL0819

Alternate gene names: 53718457

Gene position: 953999-952965 (Counterclockwise)

Preceding gene: 53718460

Following gene: 53718455

Centisome position: 23.41

GC content: 69.28

Gene sequence:

>1035_bases
ATGGCAGCGCAAACTCCCCTCCGGCATCGGACGACGACCGTCGATGTCGTGATCTATCCGGGATTCAAGGCGATCGAGGC
CGTCGGCGTCATCAACGTGTTCGACTACGCGAACGCGCGGCTCGCCGCCGCGGGGCTCGCGCCCGTCTACGATCTCCAGA
TCGCCGCGCCCGCGAAGGGCGCGGTCAAGTCCGACACCCTCATCGTGCTCGAGGCGACGAAGGCGCTCGACACGCTCGCG
GTGCCCGACACGGCGATCGTCGTCGGCGCGCGCGACATCGAGCGGGCGCTGCGCGACACGTCGATGCTCGTCGGATGGTG
CCGCGACGTGTCCGCGCGCATCGGCCGGATGGTCGGGCTGTGCTCGGGCTGCTTCTTTCTCGCCGAAGCCGGCATGCTGG
ACGGCCGGCGCGCGACGACGCACTGGAGCGTCGCCCCCCTGTTGCGGGCGCGTTATCCGGCGGTGAAGGTGGAGCCCGAC
GCGATCTTCGTTCGCGAGGGCAACGTGTGGACGTCGGCGGGCGTCACGGCCGGCCTCGATCTCGCGCTCGCGATGGTCGA
GGAGGATCTCGGCCGCGAGATCGCGCTCGCCGTCGCGCGCGATCTCGTGATTTACCTGAAGCGGCCGGGCGGCCAGTCGC
AGTTCAGCGTGTACCTGGCGAGCCAGATGACCGCGCACGCGTCGATCCGCGACATTCAGGACTGGATTCTGAACGCGCTC
GACGCGCGGCTGAGCATCGCGCAGCTCGCCAGGCGCGCCGCGATGAGCGAGCGCAACTTCATTCGCGTATTCGTGCGCGA
AACCGGCTATCGTCCGGCCGAATTCATCGAAATCGCGCGGCTCGAAAAAGCGCGCCGCCTGCTCGAGCAGGAAGCGCTGC
CGCTGAAGACGGTGGCCGTGCGCAGCGGGTTTCGTTCCGACGACCAATTGCGGCGCGTGTTCATGCGCCGCCTCGGCGTG
ACGCCCGGCGCGTATCGCGAGCGGTTCTCCGGCACCGGCGTGCGCGAAGCGCGGGGGAGCGGCGACGTGGATTGA

Upstream 100 bases:

>100_bases
GTTGTCAGGCCCGGGCGGCCGCGCCGGCGGCCGTTCGCGCCGCGCCGCGCCAAGTGGGTTAAGATCGGCGCGGTCTCGGC
AAGTCGATTGGTGAAGCGGC

Downstream 100 bases:

>100_bases
TGCGGGGGACGCGCGTCTGGCGTTCTTGGTGTGGTCGGTGTGGTCGGCGTGGTCGGCACATCTGTCGCCGCGAACCCCGC
GGGCGTTTCCATCCGGACGT

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MAAQTPLRHRTTTVDVVIYPGFKAIEAVGVINVFDYANARLAAAGLAPVYDLQIAAPAKGAVKSDTLIVLEATKALDTLA
VPDTAIVVGARDIERALRDTSMLVGWCRDVSARIGRMVGLCSGCFFLAEAGMLDGRRATTHWSVAPLLRARYPAVKVEPD
AIFVREGNVWTSAGVTAGLDLALAMVEEDLGREIALAVARDLVIYLKRPGGQSQFSVYLASQMTAHASIRDIQDWILNAL
DARLSIAQLARRAAMSERNFIRVFVRETGYRPAEFIEIARLEKARRLLEQEALPLKTVAVRSGFRSDDQLRRVFMRRLGV
TPGAYRERFSGTGVREARGSGDVD

Sequences:

>Translated_344_residues
MAAQTPLRHRTTTVDVVIYPGFKAIEAVGVINVFDYANARLAAAGLAPVYDLQIAAPAKGAVKSDTLIVLEATKALDTLA
VPDTAIVVGARDIERALRDTSMLVGWCRDVSARIGRMVGLCSGCFFLAEAGMLDGRRATTHWSVAPLLRARYPAVKVEPD
AIFVREGNVWTSAGVTAGLDLALAMVEEDLGREIALAVARDLVIYLKRPGGQSQFSVYLASQMTAHASIRDIQDWILNAL
DARLSIAQLARRAAMSERNFIRVFVRETGYRPAEFIEIARLEKARRLLEQEALPLKTVAVRSGFRSDDQLRRVFMRRLGV
TPGAYRERFSGTGVREARGSGDVD
>Mature_343_residues
AAQTPLRHRTTTVDVVIYPGFKAIEAVGVINVFDYANARLAAAGLAPVYDLQIAAPAKGAVKSDTLIVLEATKALDTLAV
PDTAIVVGARDIERALRDTSMLVGWCRDVSARIGRMVGLCSGCFFLAEAGMLDGRRATTHWSVAPLLRARYPAVKVEPDA
IFVREGNVWTSAGVTAGLDLALAMVEEDLGREIALAVARDLVIYLKRPGGQSQFSVYLASQMTAHASIRDIQDWILNALD
ARLSIAQLARRAAMSERNFIRVFVRETGYRPAEFIEIARLEKARRLLEQEALPLKTVAVRSGFRSDDQLRRVFMRRLGVT
PGAYRERFSGTGVREARGSGDVD

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 37616; Mature: 37485

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAQTPLRHRTTTVDVVIYPGFKAIEAVGVINVFDYANARLAAAGLAPVYDLQIAAPAKG
CCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEEEECCCCC
AVKSDTLIVLEATKALDTLAVPDTAIVVGARDIERALRDTSMLVGWCRDVSARIGRMVGL
CCCCCCEEEEEECHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CSGCFFLAEAGMLDGRRATTHWSVAPLLRARYPAVKVEPDAIFVREGNVWTSAGVTAGLD
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCEEEEECCCEEECCCCHHHHH
LALAMVEEDLGREIALAVARDLVIYLKRPGGQSQFSVYLASQMTAHASIRDIQDWILNAL
HHHHHHHHHHCHHHHHHHHHHHEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH
DARLSIAQLARRAAMSERNFIRVFVRETGYRPAEFIEIARLEKARRLLEQEALPLKTVAV
HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
RSGFRSDDQLRRVFMRRLGVTPGAYRERFSGTGVREARGSGDVD
HCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AAQTPLRHRTTTVDVVIYPGFKAIEAVGVINVFDYANARLAAAGLAPVYDLQIAAPAKG
CCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEEEECCCCC
AVKSDTLIVLEATKALDTLAVPDTAIVVGARDIERALRDTSMLVGWCRDVSARIGRMVGL
CCCCCCEEEEEECHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CSGCFFLAEAGMLDGRRATTHWSVAPLLRARYPAVKVEPDAIFVREGNVWTSAGVTAGLD
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCEEEEECCCEEECCCCHHHHH
LALAMVEEDLGREIALAVARDLVIYLKRPGGQSQFSVYLASQMTAHASIRDIQDWILNAL
HHHHHHHHHHCHHHHHHHHHHHEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH
DARLSIAQLARRAAMSERNFIRVFVRETGYRPAEFIEIARLEKARRLLEQEALPLKTVAV
HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
RSGFRSDDQLRRVFMRRLGVTPGAYRERFSGTGVREARGSGDVD
HCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]