| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718411
Identifier: 53718411
GI number: 53718411
Start: 896537
End: 898423
Strand: Reverse
Name: 53718411
Synonym: BPSL0772
Alternate gene names: NA
Gene position: 898423-896537 (Counterclockwise)
Preceding gene: 53718412
Following gene: 53718410
Centisome position: 22.05
GC content: 64.6
Gene sequence:
>1887_bases ATGAAAAACGCCATGGCCAAACATCCGTACATGCAGCAGCCGAAAGACCGGGGCAGCTGGGAGTTCCGGGTTGTCATCCC GGAGTACCTGCGCACGAAGGACTCCGGACGCGAGTTCAAACGCACGCTCGGCCCGACCTACGAGGAAGCGCTCACGCGTT ATCCCGGCATCGCCCTTGAATGGGCCACGCTGCGCGCCGAGTTGGAGACGCAGGCCGACGCCCCCGACCGTCCGCACCGC CCCCATCCGGTTATCACCTACAAGGTGCTGACTTCGCGCGAACACACGCTGCTGGACCACCTCGTCGCCAGCTGGGAGTA CCGGTCGCTCGACGCGTACGACTGGGAGGCGGCGGCCCTGAGCAACGAGGAGCTGGATGCACACCTGGATGCCCACGAAG CGGACCTGAAGCAGCGTCAGCAGGGGTTGCAGCGCGCGCTCCGGCGCAACGCCCCGCCCGACTGGTTCGTGGAGGAAATC GAGGAACACCTCGCCGTCTCGCTCGGCATACGGCTGCATCGGGACTGTGCAGACCGCCAGGACTTTTTCCTGCGCATGGC CGGCGCAGAACTGAAAGCGCTGCGGCTCAGCCTGGAGCGACTGAACCCTGATGAGAATGGTGACGGGTACCATGCCACGC CGCCGAAGCCGGCCGGGCCATTCGACGACGAGCCGGATACGTCTGCCAACGAGCGGACGCTATTTAAAGCGTTTGATATC TGGTCCAAGCAGAGGACGCGCGCCGGCGGCGACAAGACCGAAAAGGAGTACCGTGCGTTCGCGGAACGCTTCGCCCAATA CGCCCTCGACGCCCCGCTCGAGCGTGCGTCCCTGGCCGCCCTGGCCGCCCTCGCCCGCGAGCGCCAGATAGGACGGCGCT GGCTCGAGCACGTGGCCGCCGAGCAGGGCGTGCAACGCAAGACCCTGAAAAAGTACCGCAGCGCCATGTTCACGCTGTTC GCCACCGCCATCGACAACGGCCTGACGGACGTCAACCCGTTTGCCTTCCGCCTCGCCAGTCTGCAACTGCGCGGCACGCA CGCCGAGGAGCGCCGAAGCGACAAGGAGGCGCGCAGTCCGCTACCTAGCCCGCTGATGGACCGGTATTTCGCCGGGCCGC TGTTCGCTGGACCTGGCTTCGACCGGCGATTGCCCGCGCCCGTCGCCTTCTGGTACCCACTTTTGCTCCGATTCACCGGG GTGCGACCGCTTGAAGCGTCGTATCTCATGCGAGACGATATTGTCCTGCCCGAAGATTTCACAGCACAGGAGCACCAGCT GGCGGGGCACGGAAGCGCAAGCTGGATTTATATTTTCTCGACACATGAGGGCGTCGACGGCGTCGAGCGGCCCACCAAGA CCGGGGTAAGTCTTCGACGCATTCCGGTGCCCGAAATCCTCATGAATCTGGGATTCCCGGACTTTGTGCGCAGCGTGCCA CGTGGCCAATGGTTGTTTCCGATGCAGGTGTCCCGAGAAAACTCGGTGAACCGTGCCCGGTATGCGTTGAATGCCCTGGG AGACTATTTGCGCACTACGCTGGCCGAGCCGAATCCGCTTTTTGTTACATACAGCTTCCGCCACACCGTGGTCGATGAGG CCCGCGAAGCAGGCGTGACGCAAGAGGTGCGCGATGCCCTTGTCGGACACGCGGAAGGGGACAACCGCAGCAAGAATGCG GGAGAGACGGTTTACGGCGCGCGCTGGTATCCGGCCAGTCCGCTGCTCGAGGCGGCGGCCAAACTTGGCGCCGCACATCG CCTGCCCAAGGGCTTTCCCACCTGGGCGGAATTCCAGCAGCGTACACCGGACTTTTCCCGCGTCGTACGCGCGCCGAAAG CATTGCCGCCGAAGCGCGCGCGACGTGCTGCCCCATCGACCGAGTAA
Upstream 100 bases:
>100_bases AGGACATTTTTGAATTGGCCTGCTTTTCATGCTTTGTTCGACGTATTGAACTGGTACAAAGCGCTGGTACAAACCGGCCA CGCTTTTACCTTGCAACCGC
Downstream 100 bases:
>100_bases GGATGTGCGTGCGTCCAGTGGCCGCACGCACCGGACTGTTTTCCGAGCCGACGTCCACGAAAGGCGGAATATGGCGAAGT CGGTGGGCGACTTCGTCAGC
Product: phage integrase family protein
Products: NA
Alternate protein names: Phage Integrase Family Protein; Phage Integrase
Number of amino acids: Translated: 628; Mature: 628
Protein sequence:
>628_residues MKNAMAKHPYMQQPKDRGSWEFRVVIPEYLRTKDSGREFKRTLGPTYEEALTRYPGIALEWATLRAELETQADAPDRPHR PHPVITYKVLTSREHTLLDHLVASWEYRSLDAYDWEAAALSNEELDAHLDAHEADLKQRQQGLQRALRRNAPPDWFVEEI EEHLAVSLGIRLHRDCADRQDFFLRMAGAELKALRLSLERLNPDENGDGYHATPPKPAGPFDDEPDTSANERTLFKAFDI WSKQRTRAGGDKTEKEYRAFAERFAQYALDAPLERASLAALAALARERQIGRRWLEHVAAEQGVQRKTLKKYRSAMFTLF ATAIDNGLTDVNPFAFRLASLQLRGTHAEERRSDKEARSPLPSPLMDRYFAGPLFAGPGFDRRLPAPVAFWYPLLLRFTG VRPLEASYLMRDDIVLPEDFTAQEHQLAGHGSASWIYIFSTHEGVDGVERPTKTGVSLRRIPVPEILMNLGFPDFVRSVP RGQWLFPMQVSRENSVNRARYALNALGDYLRTTLAEPNPLFVTYSFRHTVVDEAREAGVTQEVRDALVGHAEGDNRSKNA GETVYGARWYPASPLLEAAAKLGAAHRLPKGFPTWAEFQQRTPDFSRVVRAPKALPPKRARRAAPSTE
Sequences:
>Translated_628_residues MKNAMAKHPYMQQPKDRGSWEFRVVIPEYLRTKDSGREFKRTLGPTYEEALTRYPGIALEWATLRAELETQADAPDRPHR PHPVITYKVLTSREHTLLDHLVASWEYRSLDAYDWEAAALSNEELDAHLDAHEADLKQRQQGLQRALRRNAPPDWFVEEI EEHLAVSLGIRLHRDCADRQDFFLRMAGAELKALRLSLERLNPDENGDGYHATPPKPAGPFDDEPDTSANERTLFKAFDI WSKQRTRAGGDKTEKEYRAFAERFAQYALDAPLERASLAALAALARERQIGRRWLEHVAAEQGVQRKTLKKYRSAMFTLF ATAIDNGLTDVNPFAFRLASLQLRGTHAEERRSDKEARSPLPSPLMDRYFAGPLFAGPGFDRRLPAPVAFWYPLLLRFTG VRPLEASYLMRDDIVLPEDFTAQEHQLAGHGSASWIYIFSTHEGVDGVERPTKTGVSLRRIPVPEILMNLGFPDFVRSVP RGQWLFPMQVSRENSVNRARYALNALGDYLRTTLAEPNPLFVTYSFRHTVVDEAREAGVTQEVRDALVGHAEGDNRSKNA GETVYGARWYPASPLLEAAAKLGAAHRLPKGFPTWAEFQQRTPDFSRVVRAPKALPPKRARRAAPSTE >Mature_628_residues MKNAMAKHPYMQQPKDRGSWEFRVVIPEYLRTKDSGREFKRTLGPTYEEALTRYPGIALEWATLRAELETQADAPDRPHR PHPVITYKVLTSREHTLLDHLVASWEYRSLDAYDWEAAALSNEELDAHLDAHEADLKQRQQGLQRALRRNAPPDWFVEEI EEHLAVSLGIRLHRDCADRQDFFLRMAGAELKALRLSLERLNPDENGDGYHATPPKPAGPFDDEPDTSANERTLFKAFDI WSKQRTRAGGDKTEKEYRAFAERFAQYALDAPLERASLAALAALARERQIGRRWLEHVAAEQGVQRKTLKKYRSAMFTLF ATAIDNGLTDVNPFAFRLASLQLRGTHAEERRSDKEARSPLPSPLMDRYFAGPLFAGPGFDRRLPAPVAFWYPLLLRFTG VRPLEASYLMRDDIVLPEDFTAQEHQLAGHGSASWIYIFSTHEGVDGVERPTKTGVSLRRIPVPEILMNLGFPDFVRSVP RGQWLFPMQVSRENSVNRARYALNALGDYLRTTLAEPNPLFVTYSFRHTVVDEAREAGVTQEVRDALVGHAEGDNRSKNA GETVYGARWYPASPLLEAAAKLGAAHRLPKGFPTWAEFQQRTPDFSRVVRAPKALPPKRARRAAPSTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71295; Mature: 71295
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNAMAKHPYMQQPKDRGSWEFRVVIPEYLRTKDSGREFKRTLGPTYEEALTRYPGIALE CCCCCCCCCCCCCCCCCCCEEEEEECHHHHCCCCCHHHHHHHHCCCHHHHHHHCCCCEEE WATLRAELETQADAPDRPHRPHPVITYKVLTSREHTLLDHLVASWEYRSLDAYDWEAAAL HHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHC SNEELDAHLDAHEADLKQRQQGLQRALRRNAPPDWFVEEIEEHLAVSLGIRLHRDCADRQ CCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH DFFLRMAGAELKALRLSLERLNPDENGDGYHATPPKPAGPFDDEPDTSANERTLFKAFDI HHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH WSKQRTRAGGDKTEKEYRAFAERFAQYALDAPLERASLAALAALARERQIGRRWLEHVAA HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQGVQRKTLKKYRSAMFTLFATAIDNGLTDVNPFAFRLASLQLRGTHAEERRSDKEARSP HCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCC LPSPLMDRYFAGPLFAGPGFDRRLPAPVAFWYPLLLRFTGVRPLEASYLMRDDIVLPEDF CCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCC TAQEHQLAGHGSASWIYIFSTHEGVDGVERPTKTGVSLRRIPVPEILMNLGFPDFVRSVP CCHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHCCCEEECCCHHHHHHHCCCHHHHHHCC RGQWLFPMQVSRENSVNRARYALNALGDYLRTTLAEPNPLFVTYSFRHTVVDEAREAGVT CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHCCCH QEVRDALVGHAEGDNRSKNAGETVYGARWYPASPLLEAAAKLGAAHRLPKGFPTWAEFQQ HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHH RTPDFSRVVRAPKALPPKRARRAAPSTE CCCCHHHHHHCCCCCCHHHHHCCCCCCC >Mature Secondary Structure MKNAMAKHPYMQQPKDRGSWEFRVVIPEYLRTKDSGREFKRTLGPTYEEALTRYPGIALE CCCCCCCCCCCCCCCCCCCEEEEEECHHHHCCCCCHHHHHHHHCCCHHHHHHHCCCCEEE WATLRAELETQADAPDRPHRPHPVITYKVLTSREHTLLDHLVASWEYRSLDAYDWEAAAL HHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHC SNEELDAHLDAHEADLKQRQQGLQRALRRNAPPDWFVEEIEEHLAVSLGIRLHRDCADRQ CCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH DFFLRMAGAELKALRLSLERLNPDENGDGYHATPPKPAGPFDDEPDTSANERTLFKAFDI HHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH WSKQRTRAGGDKTEKEYRAFAERFAQYALDAPLERASLAALAALARERQIGRRWLEHVAA HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQGVQRKTLKKYRSAMFTLFATAIDNGLTDVNPFAFRLASLQLRGTHAEERRSDKEARSP HCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCC LPSPLMDRYFAGPLFAGPGFDRRLPAPVAFWYPLLLRFTGVRPLEASYLMRDDIVLPEDF CCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCC TAQEHQLAGHGSASWIYIFSTHEGVDGVERPTKTGVSLRRIPVPEILMNLGFPDFVRSVP CCHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHCCCEEECCCHHHHHHHCCCHHHHHHCC RGQWLFPMQVSRENSVNRARYALNALGDYLRTTLAEPNPLFVTYSFRHTVVDEAREAGVT CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHCCCH QEVRDALVGHAEGDNRSKNAGETVYGARWYPASPLLEAAAKLGAAHRLPKGFPTWAEFQQ HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHH RTPDFSRVVRAPKALPPKRARRAAPSTE CCCCHHHHHHCCCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA