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The map label for this gene is aer [H]

Identifier: 53718349

GI number: 53718349

Start: 806553

End: 808304

Strand: Reverse

Name: aer [H]

Synonym: BPSL0706

Alternate gene names: 53718349

Gene position: 808304-806553 (Counterclockwise)

Preceding gene: 53718350

Following gene: 53718347

Centisome position: 19.84

GC content: 69.24

Gene sequence:

>1752_bases
ATGCGCGCCAATCTTCCAGTGACTCAGCGGGAATACGATTTTCCCGACGATGCGACCCTGATGTCGACGACCGACCCTCA
GAGCTATGTGACGTACGCGAACGCCGCGTTCATTCAGGTGAGCGGGTTCGAGCGCGACGAAATCATCGGCGAGCCGCACA
ATTTCGTTCGGCATCCCGACATGCCGACCGAAGCGTTCGCCGACATGTGGGCGACGCTGAAGGCCGGCCGCTCGTGGACG
GCAGTCATCAAGAACCGCCGCAAGGACGGCGATCATTACTGGGTGCGCGCGAACGCGACACCCGTGATTCGCAACGGCCA
GCTCGTCGGCTACATGTCGGTGCGCACGAAGCCGTCGCGTGAGGAGATCGCGCAGGCGGATGCGCTCTATCGTGATCTGC
GCGAACATCGCGCGCGCGGCAGGAAGTTTCACCAGGGCCTCGTCGTGCGCACCGGGCTCTTCGGATGGATGTCGCTGCTG
CAGACGATGAGCGCGCGCTGGCGCGTTCGCGCGGCGCTGCTCGCGCTGCTCGCCGGCTCGGCATGGACGGCGTTCCTCTT
CGGGCTGCACGGCGTGATGTTCGAAGGCTTCGCCGCCACCGAGACGGTGCTGCTGCTGCTCGCGGAGTGCTGGCTCGCCG
CGCAGATCACGGCGCCGCTGCAACGCGTGCTGAAGCAATCGCTCGCGGTCGCCGCGGGCCAGGCGGGCGACAACGTCCAT
CTGAACCGCGTCGACGAGATCGGCATGATCATGCGTGCGGTCAATCAGGCGGGGCTCAATCTGCGCTCGCTCGTCGACGA
CGTGAGCGAGCAGCTATCCGGCCTGCAAGGCGCGAGCGGCAAGATCGCCGCGGGCAACGACGATCTGAGCGGCCGCAGCG
AGCAGGCGGCCGCGAGCCTCGAGGAAACCGCCGCGTCGATGGAGCAGATGACCGCGACGGTGCGCAACAACGCGGACACC
GCGACGCAAGCGGGTCAGCTCGCGGGCTCGACGAGCGCGGCGGCCGAGAAAGGCGATGCGGTGGTCGGCCAGGTGGTGGC
GACGATGGGCGAGATCAGCGCGTCGAGCCGCAAGATCAGCGAGATCATCGGCGTGATCGACAGCATCGCGTTCCAGACGA
ACATCCTCGCGCTGAACGCGGCCGTCGAGGCGGCCCGGGCCGGCGAGCAAGGGCGCGGCTTCGCGGTGGTCGCGGCCGAA
GTGCGTACGCTCGCGCAGCGCAGCGCGAACGCGGCGAAGGAAATCGCGGCGCTGATTCACGACAGCGTGCAGAAAACGGC
GGCGGGCAGCGCGCTCGTCGATCAGGCGGGCGACGCGATGAACGAGATCCGCTCGCAAGTCGCGCAAGTCGCGGGGCTGA
TCGGCGAGATCGGCTCGGCGACGCGCGAGCAGTCCGACGGCATCGGCCAAGTCAACGTCGCCGTGACGCAGTTGGACAAG
ATGACGCAACAGAACGCCGCGCTCGTGCAGGAATCGGCCTCGACGGCCGACGAACTGAAACGCCGCACCCAGCGGCTCGT
CGATGCGGTGGCGGTGTTTCGCGTGAACGCGCGCGTGCCCGCCCGACACGACGATGCGCGCGCGCCGCGGGCCGGCGCGG
CCGCCGCGATGCGCGAGCGCGCGTCCGTCGCGCGGCCGCGGCCCGCGATGCGCGCGGCGCCCGCTCCGTCGCTCGCGCTC
GCGAACGCCTCGACGGCGCAAGCCCCCGCGCGGGCGACGGCGAACGCGGATGCCGACTGGCAAACGTTCTGA

Upstream 100 bases:

>100_bases
TCTCGCGAAATCGTCCGTAAACCCGATCATGTCGCCGGATTGCGCATTCCACCGCAGCGGCGACAGACGACGTTGCGGAT
CTTACGGAGAAAACCCCCAC

Downstream 100 bases:

>100_bases
CCGGCACGCGCCGCGCGGTGCGGCGTCTCACACCAAACAGGCGGCGCTCGCGCGCCGCCTGTGCGTTGCGGTTCCGCTCG
CCGGCCGCACGGCGAGCGGG

Product: putative aerotaxis sensor receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 583; Mature: 583

Protein sequence:

>583_residues
MRANLPVTQREYDFPDDATLMSTTDPQSYVTYANAAFIQVSGFERDEIIGEPHNFVRHPDMPTEAFADMWATLKAGRSWT
AVIKNRRKDGDHYWVRANATPVIRNGQLVGYMSVRTKPSREEIAQADALYRDLREHRARGRKFHQGLVVRTGLFGWMSLL
QTMSARWRVRAALLALLAGSAWTAFLFGLHGVMFEGFAATETVLLLLAECWLAAQITAPLQRVLKQSLAVAAGQAGDNVH
LNRVDEIGMIMRAVNQAGLNLRSLVDDVSEQLSGLQGASGKIAAGNDDLSGRSEQAAASLEETAASMEQMTATVRNNADT
ATQAGQLAGSTSAAAEKGDAVVGQVVATMGEISASSRKISEIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVAAE
VRTLAQRSANAAKEIAALIHDSVQKTAAGSALVDQAGDAMNEIRSQVAQVAGLIGEIGSATREQSDGIGQVNVAVTQLDK
MTQQNAALVQESASTADELKRRTQRLVDAVAVFRVNARVPARHDDARAPRAGAAAAMRERASVARPRPAMRAAPAPSLAL
ANASTAQAPARATANADADWQTF

Sequences:

>Translated_583_residues
MRANLPVTQREYDFPDDATLMSTTDPQSYVTYANAAFIQVSGFERDEIIGEPHNFVRHPDMPTEAFADMWATLKAGRSWT
AVIKNRRKDGDHYWVRANATPVIRNGQLVGYMSVRTKPSREEIAQADALYRDLREHRARGRKFHQGLVVRTGLFGWMSLL
QTMSARWRVRAALLALLAGSAWTAFLFGLHGVMFEGFAATETVLLLLAECWLAAQITAPLQRVLKQSLAVAAGQAGDNVH
LNRVDEIGMIMRAVNQAGLNLRSLVDDVSEQLSGLQGASGKIAAGNDDLSGRSEQAAASLEETAASMEQMTATVRNNADT
ATQAGQLAGSTSAAAEKGDAVVGQVVATMGEISASSRKISEIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVAAE
VRTLAQRSANAAKEIAALIHDSVQKTAAGSALVDQAGDAMNEIRSQVAQVAGLIGEIGSATREQSDGIGQVNVAVTQLDK
MTQQNAALVQESASTADELKRRTQRLVDAVAVFRVNARVPARHDDARAPRAGAAAAMRERASVARPRPAMRAAPAPSLAL
ANASTAQAPARATANADADWQTF
>Mature_583_residues
MRANLPVTQREYDFPDDATLMSTTDPQSYVTYANAAFIQVSGFERDEIIGEPHNFVRHPDMPTEAFADMWATLKAGRSWT
AVIKNRRKDGDHYWVRANATPVIRNGQLVGYMSVRTKPSREEIAQADALYRDLREHRARGRKFHQGLVVRTGLFGWMSLL
QTMSARWRVRAALLALLAGSAWTAFLFGLHGVMFEGFAATETVLLLLAECWLAAQITAPLQRVLKQSLAVAAGQAGDNVH
LNRVDEIGMIMRAVNQAGLNLRSLVDDVSEQLSGLQGASGKIAAGNDDLSGRSEQAAASLEETAASMEQMTATVRNNADT
ATQAGQLAGSTSAAAEKGDAVVGQVVATMGEISASSRKISEIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVAAE
VRTLAQRSANAAKEIAALIHDSVQKTAAGSALVDQAGDAMNEIRSQVAQVAGLIGEIGSATREQSDGIGQVNVAVTQLDK
MTQQNAALVQESASTADELKRRTQRLVDAVAVFRVNARVPARHDDARAPRAGAAAAMRERASVARPRPAMRAAPAPSLAL
ANASTAQAPARATANADADWQTF

Specific function: Signal transducer for aerotaxis. The aerotactic response is the accumulation of cells around air bubbles. The nature of the sensory stimulus detected by this protein is the proton motive force or cellular redox state. It uses a FAD prosthetic group as a r

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1789453, Length=517, Percent_Identity=47.1953578336557, Blast_Score=455, Evalue=1e-129,
Organism=Escherichia coli, GI1788195, Length=368, Percent_Identity=47.2826086956522, Blast_Score=272, Evalue=5e-74,
Organism=Escherichia coli, GI2367378, Length=338, Percent_Identity=50.5917159763314, Blast_Score=270, Evalue=1e-73,
Organism=Escherichia coli, GI1787690, Length=342, Percent_Identity=47.3684210526316, Blast_Score=254, Evalue=8e-69,
Organism=Escherichia coli, GI1788194, Length=352, Percent_Identity=45.4545454545455, Blast_Score=252, Evalue=4e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF08447 PAS_3 [H]

EC number: NA

Molecular weight: Translated: 62089; Mature: 62089

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS50885 HAMP ; PS50112 PAS ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRANLPVTQREYDFPDDATLMSTTDPQSYVTYANAAFIQVSGFERDEIIGEPHNFVRHPD
CCCCCCCCCCCCCCCCCCEEEECCCCHHHHEECCEEEEEECCCCHHHHCCCCHHHCCCCC
MPTEAFADMWATLKAGRSWTAVIKNRRKDGDHYWVRANATPVIRNGQLVGYMSVRTKPSR
CCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEECCCEEEECCEEEEEEEECCCCCH
EEIAQADALYRDLREHRARGRKFHQGLVVRTGLFGWMSLLQTMSARWRVRAALLALLAGS
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AWTAFLFGLHGVMFEGFAATETVLLLLAECWLAAQITAPLQRVLKQSLAVAAGQAGDNVH
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LNRVDEIGMIMRAVNQAGLNLRSLVDDVSEQLSGLQGASGKIAAGNDDLSGRSEQAAASL
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCHHHHHHHH
EETAASMEQMTATVRNNADTATQAGQLAGSTSAAAEKGDAVVGQVVATMGEISASSRKIS
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
EIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRTLAQRSANAAKEIAALIH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
DSVQKTAAGSALVDQAGDAMNEIRSQVAQVAGLIGEIGSATREQSDGIGQVNVAVTQLDK
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHH
MTQQNAALVQESASTADELKRRTQRLVDAVAVFRVNARVPARHDDARAPRAGAAAAMRER
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH
ASVARPRPAMRAAPAPSLALANASTAQAPARATANADADWQTF
HHHCCCCCCHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRANLPVTQREYDFPDDATLMSTTDPQSYVTYANAAFIQVSGFERDEIIGEPHNFVRHPD
CCCCCCCCCCCCCCCCCCEEEECCCCHHHHEECCEEEEEECCCCHHHHCCCCHHHCCCCC
MPTEAFADMWATLKAGRSWTAVIKNRRKDGDHYWVRANATPVIRNGQLVGYMSVRTKPSR
CCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEECCCEEEECCEEEEEEEECCCCCH
EEIAQADALYRDLREHRARGRKFHQGLVVRTGLFGWMSLLQTMSARWRVRAALLALLAGS
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AWTAFLFGLHGVMFEGFAATETVLLLLAECWLAAQITAPLQRVLKQSLAVAAGQAGDNVH
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LNRVDEIGMIMRAVNQAGLNLRSLVDDVSEQLSGLQGASGKIAAGNDDLSGRSEQAAASL
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCHHHHHHHH
EETAASMEQMTATVRNNADTATQAGQLAGSTSAAAEKGDAVVGQVVATMGEISASSRKIS
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
EIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRTLAQRSANAAKEIAALIH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
DSVQKTAAGSALVDQAGDAMNEIRSQVAQVAGLIGEIGSATREQSDGIGQVNVAVTQLDK
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHH
MTQQNAALVQESASTADELKRRTQRLVDAVAVFRVNARVPARHDDARAPRAGAAAAMRER
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH
ASVARPRPAMRAAPAPSLALANASTAQAPARATANADADWQTF
HHHCCCCCCHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503; 9190831; 9380671 [H]