| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718350
Identifier: 53718350
GI number: 53718350
Start: 809196
End: 810956
Strand: Reverse
Name: 53718350
Synonym: BPSL0707
Alternate gene names: NA
Gene position: 810956-809196 (Counterclockwise)
Preceding gene: 53718353
Following gene: 53718349
Centisome position: 19.9
GC content: 69.51
Gene sequence:
>1761_bases ATGAAAAAGATCCTCGGAGATCCGGCGTCGCGTCGCGAGCGCCGCGCGTTTCTCGGCGACGTCGCGCGTCTCGCGGGCGC GGGCATCATCGCCGGATGGACGCCGATTCGACCGATTGCCGCGCACGCGCAAGCCGCGGGCGCGGCGCCGCCGAATTTTC CCGCCGGCATCGCGCTCTACAAACAGGCGTTTCGCAACTGGAGCGGCGAGATCGCGGTCGCGGACCTGTGGACCGCCGCG CCCGCGACGCCCGCCGACGTCGTCGCGATCGTCAACTGGGCGGCCGAGAACGGTTACCGCGCGCGGCCGCTCGGCCATAT GCACAACTGGTCGCCGCTCACGGTCGCCGCGAACGGCGCGCACGAGCGCACGCTGCTCGTCGACACGACGAGGCATCTGT GCGCCGTATCCGTCGACCCGTCGACGACGCCCGCGCGCGTCGTCGCACAAGCGGGCGTGTCGCTCGATACGCTGCTCGCG ACGCTCGAGCAGCACGGGCTCGGGTTGACCGCGGCGCCCGCGCCCGGCGACATCACGCTCGGCGGCGCGCTCGCGATCGG CGCGCACGGCACCGCGCTGCCGGCGGCGAACGAGACGCGGCCGCCCGGGCATACGTACGGCTCGCTCAGCAACGCGGTGC TCGCGCTGACCGCGGTGGTCTATGACGCGGCGTCGGGCCGCTACGCGTTACGCACCTTCGATCGCACCGATCCGGACATC GGCCCGTTCCTCGCGCACGTCGGCCGCGCGTTCATCGTCGAGGCGACGTTGCAGGTCGGCGCGAATCAACGGCTGCAATG CGAGAGCTTCGTCGATATCCCCGCCGCCGAGCTATTCGCCGCGGCGGGCACGCGGGGCCGCACCGTCGAATCGTTCGTGC AGCGCTCGGGCCGCATCGAGGCGATCTGGTTTCCATTCACCGACTATCCGTGGCTGAAGGTCTGGACCGTCCGGCCGAAC CGGCCGTCGGGCGCGCGTGTCGTCGAAGAGCCGTACAACTACCCGTTTTCCGATTCGATATCGCGAGAGCTGTCCGATCT GGTCAGCCGCATCGTACTGAACGGCGAAATCCAGTTGGCACCGCTCTTCGGAAAAACGCAGTACACGATTGCGTATCTCG GCCTCACCAACATCTTCCGGCCACTGACGAACCTGTGGGGCTGGTCGCGCTCGGTGCTGCACTACGTGCGCCCGACGACG CTGCGCGTGACCGCGAACGGCTACGCGGTGCTCACGCGTCGCGAGAACGTGCAGCGCGCGATCAACGAGTTCGTCGGCGC GTATCGGCAGCGGGTCGCCGCCTATCGCGCGGCGGGCCGCTACCCGATGAACGGCCCCATCGAGATCCGCGTGACGGGCG TCGATACGCCCGACGACGTCGGCCGCGGCGCGGTGCCGCCGTCGTTATCCGCGATCCGCCCGCGTCCCGACCATCCCGAA TGGAACGCCGCGATCTGGTTCGACATCCTGACGATACCGGGCACGCCCGATGCGAACCGCTTCTATCGCGAGATCGAGCA GTGGATGCTGTCGAACTACAGCGGCGATTACGCGACCGTGCGCCCGGAATGGTCGAAGGGCTGGGGCTACGCGGACACCG CCGCATGGAGCGACGACGCGATGCTCCGCACGACGATCCCGGACCTGTTCCGCCAGGGGCTCTCGTCCGCCGACGACTGG GACGCCGCGCTGCGCACGCTCGAGCGCTACGATCCGCGGCGCGTGTTCTCGTCGCCGCTGCTCGACCGGCTGATGGGCTG A
Upstream 100 bases:
>100_bases CTTCGAACAACAAGCACGCGGTTAAAGAGGGAAACGCATTTCGATTCATTGAAAAGTTTCACTCCTTCATTGCGCAATCA ATCAACTTTTCGAGAAGCCC
Downstream 100 bases:
>100_bases CGGGCTGATGGGCTGACGCGGCGCGCGGCCCGCCGCATCGTGGCGGGCCGCTGATGGCCCAATAAAATGGAAAGCGGATT TCTATTATTTTTGATGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Oxidoreductase; Cholesterol Oxidase Choa; FAD Linked Oxidase Domain-Containing Protein; Fad-Dependent Oxidoreductase; LOW QUALITY PROTEIN Cholesterol Oxidase
Number of amino acids: Translated: 586; Mature: 586
Protein sequence:
>586_residues MKKILGDPASRRERRAFLGDVARLAGAGIIAGWTPIRPIAAHAQAAGAAPPNFPAGIALYKQAFRNWSGEIAVADLWTAA PATPADVVAIVNWAAENGYRARPLGHMHNWSPLTVAANGAHERTLLVDTTRHLCAVSVDPSTTPARVVAQAGVSLDTLLA TLEQHGLGLTAAPAPGDITLGGALAIGAHGTALPAANETRPPGHTYGSLSNAVLALTAVVYDAASGRYALRTFDRTDPDI GPFLAHVGRAFIVEATLQVGANQRLQCESFVDIPAAELFAAAGTRGRTVESFVQRSGRIEAIWFPFTDYPWLKVWTVRPN RPSGARVVEEPYNYPFSDSISRELSDLVSRIVLNGEIQLAPLFGKTQYTIAYLGLTNIFRPLTNLWGWSRSVLHYVRPTT LRVTANGYAVLTRRENVQRAINEFVGAYRQRVAAYRAAGRYPMNGPIEIRVTGVDTPDDVGRGAVPPSLSAIRPRPDHPE WNAAIWFDILTIPGTPDANRFYREIEQWMLSNYSGDYATVRPEWSKGWGYADTAAWSDDAMLRTTIPDLFRQGLSSADDW DAALRTLERYDPRRVFSSPLLDRLMG
Sequences:
>Translated_586_residues MKKILGDPASRRERRAFLGDVARLAGAGIIAGWTPIRPIAAHAQAAGAAPPNFPAGIALYKQAFRNWSGEIAVADLWTAA PATPADVVAIVNWAAENGYRARPLGHMHNWSPLTVAANGAHERTLLVDTTRHLCAVSVDPSTTPARVVAQAGVSLDTLLA TLEQHGLGLTAAPAPGDITLGGALAIGAHGTALPAANETRPPGHTYGSLSNAVLALTAVVYDAASGRYALRTFDRTDPDI GPFLAHVGRAFIVEATLQVGANQRLQCESFVDIPAAELFAAAGTRGRTVESFVQRSGRIEAIWFPFTDYPWLKVWTVRPN RPSGARVVEEPYNYPFSDSISRELSDLVSRIVLNGEIQLAPLFGKTQYTIAYLGLTNIFRPLTNLWGWSRSVLHYVRPTT LRVTANGYAVLTRRENVQRAINEFVGAYRQRVAAYRAAGRYPMNGPIEIRVTGVDTPDDVGRGAVPPSLSAIRPRPDHPE WNAAIWFDILTIPGTPDANRFYREIEQWMLSNYSGDYATVRPEWSKGWGYADTAAWSDDAMLRTTIPDLFRQGLSSADDW DAALRTLERYDPRRVFSSPLLDRLMG >Mature_586_residues MKKILGDPASRRERRAFLGDVARLAGAGIIAGWTPIRPIAAHAQAAGAAPPNFPAGIALYKQAFRNWSGEIAVADLWTAA PATPADVVAIVNWAAENGYRARPLGHMHNWSPLTVAANGAHERTLLVDTTRHLCAVSVDPSTTPARVVAQAGVSLDTLLA TLEQHGLGLTAAPAPGDITLGGALAIGAHGTALPAANETRPPGHTYGSLSNAVLALTAVVYDAASGRYALRTFDRTDPDI GPFLAHVGRAFIVEATLQVGANQRLQCESFVDIPAAELFAAAGTRGRTVESFVQRSGRIEAIWFPFTDYPWLKVWTVRPN RPSGARVVEEPYNYPFSDSISRELSDLVSRIVLNGEIQLAPLFGKTQYTIAYLGLTNIFRPLTNLWGWSRSVLHYVRPTT LRVTANGYAVLTRRENVQRAINEFVGAYRQRVAAYRAAGRYPMNGPIEIRVTGVDTPDDVGRGAVPPSLSAIRPRPDHPE WNAAIWFDILTIPGTPDANRFYREIEQWMLSNYSGDYATVRPEWSKGWGYADTAAWSDDAMLRTTIPDLFRQGLSSADDW DAALRTLERYDPRRVFSSPLLDRLMG
Specific function: Unknown
COG id: COG0277
COG function: function code C; FAD/FMN-containing dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63955; Mature: 63955
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILGDPASRRERRAFLGDVARLAGAGIIAGWTPIRPIAAHAQAAGAAPPNFPAGIALY CCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHCCCCCCCCCHHHHHH KQAFRNWSGEIAVADLWTAAPATPADVVAIVNWAAENGYRARPLGHMHNWSPLTVAANGA HHHHHCCCCCEEEEEEECCCCCCHHHHEEEEEHHHCCCCCCCCCCCCCCCCCEEEEECCC HERTLLVDTTRHLCAVSVDPSTTPARVVAQAGVSLDTLLATLEQHGLGLTAAPAPGDITL CCEEEEEECCCCEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCEEE GGALAIGAHGTALPAANETRPPGHTYGSLSNAVLALTAVVYDAASGRYALRTFDRTDPDI CCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCH GPFLAHVGRAFIVEATLQVGANQRLQCESFVDIPAAELFAAAGTRGRTVESFVQRSGRIE HHHHHHHCHHHEEHHHHHHCCCCCEEHHHHCCCCHHHHHHHCCCCCCHHHHHHHHCCCEE AIWFPFTDYPWLKVWTVRPNRPSGARVVEEPYNYPFSDSISRELSDLVSRIVLNGEIQLA EEEECCCCCCCEEEEEECCCCCCCCEEHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE PLFGKTQYTIAYLGLTNIFRPLTNLWGWSRSVLHYVRPTTLRVTANGYAVLTRRENVQRA EECCCCEEEEEEHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECCEEEEEEHHHHHHH INEFVGAYRQRVAAYRAAGRYPMNGPIEIRVTGVDTPDDVGRGAVPPSLSAIRPRPDHPE HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHCCCCCCCCCCCCCCCCCCCCC WNAAIWFDILTIPGTPDANRFYREIEQWMLSNYSGDYATVRPEWSKGWGYADTAAWSDDA CCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCC MLRTTIPDLFRQGLSSADDWDAALRTLERYDPRRVFSSPLLDRLMG CHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCC >Mature Secondary Structure MKKILGDPASRRERRAFLGDVARLAGAGIIAGWTPIRPIAAHAQAAGAAPPNFPAGIALY CCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHCCCCCCCCCHHHHHH KQAFRNWSGEIAVADLWTAAPATPADVVAIVNWAAENGYRARPLGHMHNWSPLTVAANGA HHHHHCCCCCEEEEEEECCCCCCHHHHEEEEEHHHCCCCCCCCCCCCCCCCCEEEEECCC HERTLLVDTTRHLCAVSVDPSTTPARVVAQAGVSLDTLLATLEQHGLGLTAAPAPGDITL CCEEEEEECCCCEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCEEE GGALAIGAHGTALPAANETRPPGHTYGSLSNAVLALTAVVYDAASGRYALRTFDRTDPDI CCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCH GPFLAHVGRAFIVEATLQVGANQRLQCESFVDIPAAELFAAAGTRGRTVESFVQRSGRIE HHHHHHHCHHHEEHHHHHHCCCCCEEHHHHCCCCHHHHHHHCCCCCCHHHHHHHHCCCEE AIWFPFTDYPWLKVWTVRPNRPSGARVVEEPYNYPFSDSISRELSDLVSRIVLNGEIQLA EEEECCCCCCCEEEEEECCCCCCCCEEHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE PLFGKTQYTIAYLGLTNIFRPLTNLWGWSRSVLHYVRPTTLRVTANGYAVLTRRENVQRA EECCCCEEEEEEHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECCEEEEEEHHHHHHH INEFVGAYRQRVAAYRAAGRYPMNGPIEIRVTGVDTPDDVGRGAVPPSLSAIRPRPDHPE HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHCCCCCCCCCCCCCCCCCCCCC WNAAIWFDILTIPGTPDANRFYREIEQWMLSNYSGDYATVRPEWSKGWGYADTAAWSDDA CCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCC MLRTTIPDLFRQGLSSADDWDAALRTLERYDPRRVFSSPLLDRLMG CHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA