Click here to switch to the map view.

The map label for this gene is 53718328

Identifier: 53718328

GI number: 53718328

Start: 780710

End: 781132

Strand: Reverse

Name: 53718328

Synonym: BPSL0685

Alternate gene names: NA

Gene position: 781132-780710 (Counterclockwise)

Preceding gene: 53718329

Following gene: 53718327

Centisome position: 19.17

GC content: 62.65

Gene sequence:

>423_bases
TTGCGAGCCAAAACCATGTCCACTATCGATACGAGCGAATTCCGAAAAACCGTCTTCAGCCCCTCCTTCTGGGAAGACAA
GATGGGCTACGCGCGCGGCAAGCGGGTCGGCAATCACGTGTACATCGCGGGCTGCGTCGCGTCGGACGGCAACGCCGCCG
TGATCGGCAACGATGCGTACGAGCAGACCGCGTTCATCATCGCCAAGATCGAGAAGTACCTGAACGAGCTCGGCGCCGAG
CTGAGCGACGTCGTCAGCACGGTCACGCACCTGACGGGCTTCGAGCACTTCGACGACTACTGCCGCGCGTTCAGCGAGCG
CTTTCGCGACATCCGCCCGGTCAACACGACGGTCGCGGTGAAGTCGCTCGTCGAGCCCCGGCATTACGTCGAGATCACCG
CGACGGCGATCGTCGGCGATTGA

Upstream 100 bases:

>100_bases
CAAGTCCGACATTCTGAAATCTTCAAGGGAGGCCCATTCGTCACATCGAGTCAATCAAGCGATATCGCGCTCATCCATTC
CTGTTTTTCACGCCATTTAT

Downstream 100 bases:

>100_bases
CCTTCCGATACGAGGGCAGCCATGAGCCACGCAACCGTCCATCCGAGCGGCGCACTGAAGGGCACCGTGACGCTTCCCGC
CTCGAAGCCGCACGTTCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Endoribonuclease; Endoribonuclease L-PSP Family Protein; Oxidoreductase Aldo/Keto Reductase Family; Pyrimidine Utilization Protein C; Endoribonuclease L-PSP/Chorismate Mutase; Endoribonuclease L-Psp; Endoribonuclease L-PSP YjgF-Like; Ribonuclease PSP-Type; Aldo/Keto Reductase; YigF Family Translation Initiation Factor

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MRAKTMSTIDTSEFRKTVFSPSFWEDKMGYARGKRVGNHVYIAGCVASDGNAAVIGNDAYEQTAFIIAKIEKYLNELGAE
LSDVVSTVTHLTGFEHFDDYCRAFSERFRDIRPVNTTVAVKSLVEPRHYVEITATAIVGD

Sequences:

>Translated_140_residues
MRAKTMSTIDTSEFRKTVFSPSFWEDKMGYARGKRVGNHVYIAGCVASDGNAAVIGNDAYEQTAFIIAKIEKYLNELGAE
LSDVVSTVTHLTGFEHFDDYCRAFSERFRDIRPVNTTVAVKSLVEPRHYVEITATAIVGD
>Mature_140_residues
MRAKTMSTIDTSEFRKTVFSPSFWEDKMGYARGKRVGNHVYIAGCVASDGNAAVIGNDAYEQTAFIIAKIEKYLNELGAE
LSDVVSTVTHLTGFEHFDDYCRAFSERFRDIRPVNTTVAVKSLVEPRHYVEITATAIVGD

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15607; Mature: 15607

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAKTMSTIDTSEFRKTVFSPSFWEDKMGYARGKRVGNHVYIAGCVASDGNAAVIGNDAY
CCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCEEEECCCHH
EQTAFIIAKIEKYLNELGAELSDVVSTVTHLTGFEHFDDYCRAFSERFRDIRPVNTTVAV
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHH
KSLVEPRHYVEITATAIVGD
HHHHCCCHHEEEEEEEEECC
>Mature Secondary Structure
MRAKTMSTIDTSEFRKTVFSPSFWEDKMGYARGKRVGNHVYIAGCVASDGNAAVIGNDAY
CCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCEEEECCCHH
EQTAFIIAKIEKYLNELGAELSDVVSTVTHLTGFEHFDDYCRAFSERFRDIRPVNTTVAV
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHH
KSLVEPRHYVEITATAIVGD
HHHHCCCHHEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA