| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is ybeZ [H]
Identifier: 53718316
GI number: 53718316
Start: 766175
End: 767239
Strand: Reverse
Name: ybeZ [H]
Synonym: BPSL0673
Alternate gene names: 53718316
Gene position: 767239-766175 (Counterclockwise)
Preceding gene: 53718317
Following gene: 229269498
Centisome position: 18.83
GC content: 69.2
Gene sequence:
>1065_bases TTGAAAACCGCTCAAGCACTGGAATTCACCGCGCCGCGCGACGACAACGCGCGCCTCGCGAACCTCTGCGGCCCGCTCGA CGAAAATCTGCGGCAGATCGAACAGGCGCTCGACGTGACGCTGTCGCGCCGCGGCCACCGCATCGCGATTCGCGGCCGCG GCGCGAAAATCGCGCTCGCGGCGCTCGAAGACTTCTACAACCGCGCGCGCGAACCGCTGTCGGTCGACGACATCCAGCTC GCGCTCGTCGAGGCCCGGCATCCGGGCAACCCCCGCCGCAACGGCAACGGCGACGGCGAACCCGAGATCGACGTGCGGTT TCGCGGCGACCCCGATCATCCATTCGACGAGCCCGTCGTGCGTCTCGGCGACGAGCCGCCCGCCGACGAGGCGGCGCCGA AGCTCTACACGCGCCGCGCCGATCTGCGCGGGCGCACGCCCGCGCAGCGCGAGTACCTGAAGCAGATCCTGTCGCACGAC GTCACGTTCGGCGTCGGGCCGGCGGGCACCGGCAAGACGTATCTCGCCGTCGCGTGCGCAGTCGACGCGCTCGAGCGCGA CCAGGTCAAGCGCATCGTGCTGACGCGGCCGGCCGTCGAGGCGGGCGAGCGGCTCGGCTTCCTGCCGGGCGATCTCGCGC AGAAGGTCGATCCGTACCTGCGCCCGCTCTACGACGCGCTGTACGACCTGCTCGGCTTCGACAAGACCGCGAAGATGTTC GAGCGCCAGATGATCGAGATCGCGCCGCTCGCATACATGCGCGGCCGCACGCTGAACCACGCGTTCATCATCCTCGACGA AGCGCAGAACACGACGCCCGAGCAGATGAAGATGTTCCTCACGCGGATCGGCTTCGGTTCGAAGGCGGTCGTCACGGGCG ATACGAGCCAGGTCGACTTGCCGCGCGGGCACAAGAGCGGGCTCGTCGAGGCGCAGCAGGTGCTCGGCGGCGTGCGCGGC ATCGCGCTCACGCGCTTCACGAGCGCGGACGTGGTCCGGCATCCGCTCGTCGCGCGGATCGTCGAGGCTTACGACGAGTT CCACGCGCAGCACAAGGACGAATAG
Upstream 100 bases:
>100_bases TCAATCACGCGTATCCCCACTCGCTGCGCGGCGAGCTCGTGCTCGCGCACGGCGACGCGAGCGCCGCCACGCACTGACGC AACAGGAACCCGACGCCACT
Downstream 100 bases:
>100_bases CGCGCACGCGCGGGACGGGACCGAACTCGTCCCGCGCCGGATCGGTAGATCCGGGCCGACGCGATCGGCGGACGGCCGCG CGCGATCCCTGCTGCGTGCG
Product: putative PhoH-family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MKTAQALEFTAPRDDNARLANLCGPLDENLRQIEQALDVTLSRRGHRIAIRGRGAKIALAALEDFYNRAREPLSVDDIQL ALVEARHPGNPRRNGNGDGEPEIDVRFRGDPDHPFDEPVVRLGDEPPADEAAPKLYTRRADLRGRTPAQREYLKQILSHD VTFGVGPAGTGKTYLAVACAVDALERDQVKRIVLTRPAVEAGERLGFLPGDLAQKVDPYLRPLYDALYDLLGFDKTAKMF ERQMIEIAPLAYMRGRTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSKAVVTGDTSQVDLPRGHKSGLVEAQQVLGGVRG IALTRFTSADVVRHPLVARIVEAYDEFHAQHKDE
Sequences:
>Translated_354_residues MKTAQALEFTAPRDDNARLANLCGPLDENLRQIEQALDVTLSRRGHRIAIRGRGAKIALAALEDFYNRAREPLSVDDIQL ALVEARHPGNPRRNGNGDGEPEIDVRFRGDPDHPFDEPVVRLGDEPPADEAAPKLYTRRADLRGRTPAQREYLKQILSHD VTFGVGPAGTGKTYLAVACAVDALERDQVKRIVLTRPAVEAGERLGFLPGDLAQKVDPYLRPLYDALYDLLGFDKTAKMF ERQMIEIAPLAYMRGRTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSKAVVTGDTSQVDLPRGHKSGLVEAQQVLGGVRG IALTRFTSADVVRHPLVARIVEAYDEFHAQHKDE >Mature_354_residues MKTAQALEFTAPRDDNARLANLCGPLDENLRQIEQALDVTLSRRGHRIAIRGRGAKIALAALEDFYNRAREPLSVDDIQL ALVEARHPGNPRRNGNGDGEPEIDVRFRGDPDHPFDEPVVRLGDEPPADEAAPKLYTRRADLRGRTPAQREYLKQILSHD VTFGVGPAGTGKTYLAVACAVDALERDQVKRIVLTRPAVEAGERLGFLPGDLAQKVDPYLRPLYDALYDLLGFDKTAKMF ERQMIEIAPLAYMRGRTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSKAVVTGDTSQVDLPRGHKSGLVEAQQVLGGVRG IALTRFTSADVVRHPLVARIVEAYDEFHAQHKDE
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=341, Percent_Identity=53.6656891495601, Blast_Score=324, Evalue=6e-90, Organism=Escherichia coli, GI1787257, Length=204, Percent_Identity=48.0392156862745, Blast_Score=183, Evalue=1e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 39287; Mature: 39287
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTAQALEFTAPRDDNARLANLCGPLDENLRQIEQALDVTLSRRGHRIAIRGRGAKIALA CCCCCCEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEHHH ALEDFYNRAREPLSVDDIQLALVEARHPGNPRRNGNGDGEPEIDVRFRGDPDHPFDEPVV HHHHHHHHHCCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHH RLGDEPPADEAAPKLYTRRADLRGRTPAQREYLKQILSHDVTFGVGPAGTGKTYLAVACA HCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHH VDALERDQVKRIVLTRPAVEAGERLGFLPGDLAQKVDPYLRPLYDALYDLLGFDKTAKMF HHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCHHHHHH ERQMIEIAPLAYMRGRTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSKAVVTGDTSQVDL HHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCC PRGHKSGLVEAQQVLGGVRGIALTRFTSADVVRHPLVARIVEAYDEFHAQHKDE CCCCCCHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKTAQALEFTAPRDDNARLANLCGPLDENLRQIEQALDVTLSRRGHRIAIRGRGAKIALA CCCCCCEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEHHH ALEDFYNRAREPLSVDDIQLALVEARHPGNPRRNGNGDGEPEIDVRFRGDPDHPFDEPVV HHHHHHHHHCCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHH RLGDEPPADEAAPKLYTRRADLRGRTPAQREYLKQILSHDVTFGVGPAGTGKTYLAVACA HCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHH VDALERDQVKRIVLTRPAVEAGERLGFLPGDLAQKVDPYLRPLYDALYDLLGFDKTAKMF HHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCHHHHHH ERQMIEIAPLAYMRGRTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSKAVVTGDTSQVDL HHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCC PRGHKSGLVEAQQVLGGVRGIALTRFTSADVVRHPLVARIVEAYDEFHAQHKDE CCCCCCHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]