The gene/protein map for NC_002678 is currently unavailable.
Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

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The map label for this gene is 53718254

Identifier: 53718254

GI number: 53718254

Start: 690580

End: 693099

Strand: Reverse

Name: 53718254

Synonym: BPSL0611

Alternate gene names: NA

Gene position: 693099-690580 (Counterclockwise)

Preceding gene: 53718255

Following gene: 53718253

Centisome position: 17.01

GC content: 72.54

Gene sequence:

>2520_bases
ATGAAATCCGCGCCGGATCGCGTGGCGCGCGGCGCCGCCCAATGGACGTTGATCGCGACGCCCGCTGGCGCGATCGCGCG
ACCGAGCGAGCTCGGCGAAGCCGGCTGGTGCGCGGCAAGCGTGCCCGGCACCGTCGCGCAGGCGCTCGCCGCCGCGCGCC
GCTTCGATCCCGCGCATCCGTACCCGCTCGGCGACAGCGACTACTGGTACCGCACGACGCTGCACGGCGCTGGGCCGCGC
ATCGTCCGGCTCAACGGCCTCGCGACGATCGCCGAGGTCTGGCTCGACGACACGCTGCTGCTCTGCTCGGACAACATGTA
CGTCGCGCACGATCTGCCCGTGACGCTCGGCGGCGCGCACCGTCTCGCGCTCTGCTTTCGCTCGCTCGACCGGCACCTCG
CCGAGCACCCGCCGCGCGGCCGCGCGCGCTGGCGCACGCGCCTCGTCGATACGCCCGCGCTGCGCGGCGTGCGCGCGACG
TTCCTCGGCCGGATGCCGGGCTGGTTCCCGGCGATCGAGCCGGTCGGCCCGTGGCGTCCGATCGACATCGTGAATCCGGC
CGGGGCGCCGACGATCGTGCACGACACGCTGCGCGCGACGCTCGACGGGCGCGACGGCGTGCTCGACGCGACGCTCGAGT
TCGCCGCGCCGCTTTCGAGAACGGCGCGCGCGCAGCTCGTCTGCGGCGAGCATGCGGCGCCGCTCGAAGCGACCGGTCCG
CGCACCGCGCGCGCAACGCTCAGGATTGCGAACGTCACGCCGTGGTGGCCGCATACGCACGGCGAACCCGCGTTGTACGA
CGTCGGCGTGGCAATCGGCGGCGCGACGATTGCGCTCGCCAAAACGGGCTTTCGCACGCTCGCCGTCGAGCGCGGCGCGG
ACGGCCGCGGCTTCGCGCTATCGGTCAACGGCACGCCGCTTTTCGCGCGCGGCGCATGCTGGACGAGCGCCGACCCCGTC
GGCCTGCACGCCGATGCGCCCGCCTATCGCCGCGCGCTCGTGCTCGCGCGCGACGCCGGCTGCAACATGATCCGCGTCGG
CGGCACGATGATCTACGAGGCCGACGCGTTCTACGCGCTCTGCGACGAGTTGGGGCTGCTCGTGTGGCAAGACTTCATGC
TCGCGAACTTCGACTATCCGTCGAACGATCCGCGCTTTGCCGAATCGCTCAAGCGCGAGGCCGAGCAGTTCCTCGGCCGG
CACATGGCGCGGCCGTCGATCGCGGTGCTGTGCGGCGGCAGCGAGATCGCGCAGCAGGCCGCGATGGTCGGCCTCGCGCC
CGACGAGCGCCGCGTGCCCGCCACCGAGCAATGGCTCGCCGAACTGTGCGCCGCGCATCGCCCCGATGCCGCGTACGTCA
GCGATTCGCCGCACGGCGGCGTGCTGCCGTTCGCGCCGCGCGAGGGCGTTACGCACTACTACGGCGTCGGCGCGTACCTG
CGCCCTCCCGAGGATGCACGCCGCGCCGGCGTGCGCTTCGCGAGCGAGTGCCTCGCGTTCGCGAACGTGCCGTGCGACGC
GACGCTCGCCTCGATCGGCTCGCCCGCCGCGCACGAGCCGGCCTGGAAACGCGCGGTGCCGCGCGATCCCGGCGCGCCGT
GGGATTTCGACGACGTGCGCGATCACTACCTGCGCGCGCTGTACGGCGTCGAGCCCGCGCGCTTGCGCAGCATCGATCCC
GCCCGCTATCTGACGCTGTCGCGCGCCGTCGTCGCCGATCTCGTCGGGGAGACGCTCGCCGAGTGGCGGCGCGTCGGCTC
CTCGTGCGCGGGCGCGCTCGTCTGGCAGTTCCAGGACGTGATGCCGGGCGCGGGCTGGGGCCTCGTCGACGCGCACGGCC
GGCCGAAATCCGCATGGCATGCGTTGCGGCGCGTATCGCAGCCGCGGCAGATCCTGCTGACCGACGAAGGGCTCAACGGC
CTCGACGTGCACGTGCTCAACGATGCGCCCGCGCCGCTCGAAGCCCGCATCGAGCTCGTCGCGCTGCGCGACGGCAAGAC
GCCGATCGCGCGCGCGGCCCGCACGGTGCACGTCGCCGCCCACGCGGGCCAATGCGTGAATTCGGCCGACCTGCTCGGCC
GATTCTTCGATTTCACCTATGCGTACCGCTTCGGCCCGCGCGAGCACGACGTCGTGATCGCATCGCTGTACGCGAGCGAC
GGCGCGCTGCTGTCGCAGGCGTTCCACTTTCCCGAACGCACCGCGCCGACCGTGTTCGAGCGCGGCGACATCGGTCTCGA
GGCGAGCGCCGCGTATCGAGACGGCCGCTGGTGCGTGCAAGTGCAGACGCGCACGTTCGCGCGCTACGTGCATGTGTGCG
CGCCGGGCCTGCTGCCCGACATCGACTGGTTCCATCTCGCGCCGGGTGCCGCCGCGCGGATCGAGTTCGCCGCCGACCCT
CATTCTCCCGCTCCCGACCACCGCCCGCCCGAAGCCGACGCGGCCCACTGCGCCCCGCCCGCGATCGAGGTGCGCGCACT
CAATTCCAACAAGACCATTCGCCCGAGGATAGAAAATTGA

Upstream 100 bases:

>100_bases
TCATCGACGGCGTCGCGCGTATCGCGCCGCCCGGCAGGGTCGAGCCGAATCCGCCGTTCGGCACGCTGTACGTGCCGCCG
AGGCCCGTTACCGCGGTCCG

Downstream 100 bases:

>100_bases
GACCAGTTCGATTCGACGATTGCCTGGGATGGCTGCATGAGGGCCGCACGCGGCGCGGCGCCGTGATCTGCGAGGCGCTC
GGCCATGAGGCGCTGTGGAC

Product: glycosyl hydrolase family protein

Products: NA

Alternate protein names: Glycoside Hydrolase Family Protein; Beta-Mannosidase Protein; Glycoside Hydrolase; Mannosidase; Glycoside Hydrolase Family 2 Protein; Glycosidase; Beta-Galactosidase/Beta-Glucuronidase; Beta-Glucuronidase; Exported Glycosyl Hydrolase; Beta-Galactosidase/Beta- Glucuronidase Family Protein; O-Glycosyl Hydrolase; Beta-Mannosidase Man2A; Beta-Galactosidase/Beta; Glycosyl Hydrolase; Mannosylglycoprotein Endo-Beta-Mannosidase; Beta-Mannosidase-Related Protein; BETA-Mannosidase Protein; Glycosyl Hydrolase Family Protein; Glycoside Hydrolase Family 2 TIM Barrel

Number of amino acids: Translated: 839; Mature: 839

Protein sequence:

>839_residues
MKSAPDRVARGAAQWTLIATPAGAIARPSELGEAGWCAASVPGTVAQALAAARRFDPAHPYPLGDSDYWYRTTLHGAGPR
IVRLNGLATIAEVWLDDTLLLCSDNMYVAHDLPVTLGGAHRLALCFRSLDRHLAEHPPRGRARWRTRLVDTPALRGVRAT
FLGRMPGWFPAIEPVGPWRPIDIVNPAGAPTIVHDTLRATLDGRDGVLDATLEFAAPLSRTARAQLVCGEHAAPLEATGP
RTARATLRIANVTPWWPHTHGEPALYDVGVAIGGATIALAKTGFRTLAVERGADGRGFALSVNGTPLFARGACWTSADPV
GLHADAPAYRRALVLARDAGCNMIRVGGTMIYEADAFYALCDELGLLVWQDFMLANFDYPSNDPRFAESLKREAEQFLGR
HMARPSIAVLCGGSEIAQQAAMVGLAPDERRVPATEQWLAELCAAHRPDAAYVSDSPHGGVLPFAPREGVTHYYGVGAYL
RPPEDARRAGVRFASECLAFANVPCDATLASIGSPAAHEPAWKRAVPRDPGAPWDFDDVRDHYLRALYGVEPARLRSIDP
ARYLTLSRAVVADLVGETLAEWRRVGSSCAGALVWQFQDVMPGAGWGLVDAHGRPKSAWHALRRVSQPRQILLTDEGLNG
LDVHVLNDAPAPLEARIELVALRDGKTPIARAARTVHVAAHAGQCVNSADLLGRFFDFTYAYRFGPREHDVVIASLYASD
GALLSQAFHFPERTAPTVFERGDIGLEASAAYRDGRWCVQVQTRTFARYVHVCAPGLLPDIDWFHLAPGAAARIEFAADP
HSPAPDHRPPEADAAHCAPPAIEVRALNSNKTIRPRIEN

Sequences:

>Translated_839_residues
MKSAPDRVARGAAQWTLIATPAGAIARPSELGEAGWCAASVPGTVAQALAAARRFDPAHPYPLGDSDYWYRTTLHGAGPR
IVRLNGLATIAEVWLDDTLLLCSDNMYVAHDLPVTLGGAHRLALCFRSLDRHLAEHPPRGRARWRTRLVDTPALRGVRAT
FLGRMPGWFPAIEPVGPWRPIDIVNPAGAPTIVHDTLRATLDGRDGVLDATLEFAAPLSRTARAQLVCGEHAAPLEATGP
RTARATLRIANVTPWWPHTHGEPALYDVGVAIGGATIALAKTGFRTLAVERGADGRGFALSVNGTPLFARGACWTSADPV
GLHADAPAYRRALVLARDAGCNMIRVGGTMIYEADAFYALCDELGLLVWQDFMLANFDYPSNDPRFAESLKREAEQFLGR
HMARPSIAVLCGGSEIAQQAAMVGLAPDERRVPATEQWLAELCAAHRPDAAYVSDSPHGGVLPFAPREGVTHYYGVGAYL
RPPEDARRAGVRFASECLAFANVPCDATLASIGSPAAHEPAWKRAVPRDPGAPWDFDDVRDHYLRALYGVEPARLRSIDP
ARYLTLSRAVVADLVGETLAEWRRVGSSCAGALVWQFQDVMPGAGWGLVDAHGRPKSAWHALRRVSQPRQILLTDEGLNG
LDVHVLNDAPAPLEARIELVALRDGKTPIARAARTVHVAAHAGQCVNSADLLGRFFDFTYAYRFGPREHDVVIASLYASD
GALLSQAFHFPERTAPTVFERGDIGLEASAAYRDGRWCVQVQTRTFARYVHVCAPGLLPDIDWFHLAPGAAARIEFAADP
HSPAPDHRPPEADAAHCAPPAIEVRALNSNKTIRPRIEN
>Mature_839_residues
MKSAPDRVARGAAQWTLIATPAGAIARPSELGEAGWCAASVPGTVAQALAAARRFDPAHPYPLGDSDYWYRTTLHGAGPR
IVRLNGLATIAEVWLDDTLLLCSDNMYVAHDLPVTLGGAHRLALCFRSLDRHLAEHPPRGRARWRTRLVDTPALRGVRAT
FLGRMPGWFPAIEPVGPWRPIDIVNPAGAPTIVHDTLRATLDGRDGVLDATLEFAAPLSRTARAQLVCGEHAAPLEATGP
RTARATLRIANVTPWWPHTHGEPALYDVGVAIGGATIALAKTGFRTLAVERGADGRGFALSVNGTPLFARGACWTSADPV
GLHADAPAYRRALVLARDAGCNMIRVGGTMIYEADAFYALCDELGLLVWQDFMLANFDYPSNDPRFAESLKREAEQFLGR
HMARPSIAVLCGGSEIAQQAAMVGLAPDERRVPATEQWLAELCAAHRPDAAYVSDSPHGGVLPFAPREGVTHYYGVGAYL
RPPEDARRAGVRFASECLAFANVPCDATLASIGSPAAHEPAWKRAVPRDPGAPWDFDDVRDHYLRALYGVEPARLRSIDP
ARYLTLSRAVVADLVGETLAEWRRVGSSCAGALVWQFQDVMPGAGWGLVDAHGRPKSAWHALRRVSQPRQILLTDEGLNG
LDVHVLNDAPAPLEARIELVALRDGKTPIARAARTVHVAAHAGQCVNSADLLGRFFDFTYAYRFGPREHDVVIASLYASD
GALLSQAFHFPERTAPTVFERGDIGLEASAAYRDGRWCVQVQTRTFARYVHVCAPGLLPDIDWFHLAPGAAARIEFAADP
HSPAPDHRPPEADAAHCAPPAIEVRALNSNKTIRPRIEN

Specific function: Unknown

COG id: COG3250

COG function: function code G; Beta-galactosidase/beta-glucuronidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI84798622, Length=612, Percent_Identity=25.1633986928105, Blast_Score=133, Evalue=6e-31,
Organism=Caenorhabditis elegans, GI17550784, Length=471, Percent_Identity=25.0530785562633, Blast_Score=107, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24643840, Length=462, Percent_Identity=24.8917748917749, Blast_Score=99, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24643838, Length=462, Percent_Identity=24.8917748917749, Blast_Score=98, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 90774; Mature: 90774

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSAPDRVARGAAQWTLIATPAGAIARPSELGEAGWCAASVPGTVAQALAAARRFDPAHP
CCCCHHHHHCCCCCEEEEECCCCCCCCHHHCCCCCCEECCCCHHHHHHHHHHHHCCCCCC
YPLGDSDYWYRTTLHGAGPRIVRLNGLATIAEVWLDDTLLLCSDNMYVAHDLPVTLGGAH
CCCCCCCCEEEEEECCCCCCEEEECCHHHHHHHHHCCEEEEEECCEEEEECCCEEECCHH
RLALCFRSLDRHLAEHPPRGRARWRTRLVDTPALRGVRATFLGRMPGWFPAIEPVGPWRP
HHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
IDIVNPAGAPTIVHDTLRATLDGRDGVLDATLEFAAPLSRTARAQLVCGEHAAPLEATGP
EEEECCCCCCHHHHHHHHHHCCCCCCEEHHHHHHHCCHHHCCCEEEEECCCCCCCCCCCC
RTARATLRIANVTPWWPHTHGEPALYDVGVAIGGATIALAKTGFRTLAVERGADGRGFAL
CCEEEEEEEECCCCCCCCCCCCCCEEEEEEEECCEEEEEECCCCEEEEEECCCCCCCEEE
SVNGTPLFARGACWTSADPVGLHADAPAYRRALVLARDAGCNMIRVGGTMIYEADAFYAL
EECCCEEEECCCCCCCCCCCCCCCCCHHHHEEEEEEECCCCCEEEECCEEEEECCHHHHH
CDELGLLVWQDFMLANFDYPSNDPRFAESLKREAEQFLGRHMARPSIAVLCGGSEIAQQA
HHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHH
AMVGLAPDERRVPATEQWLAELCAAHRPDAAYVSDSPHGGVLPFAPREGVTHYYGVGAYL
HHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCEEEECCCCC
RPPEDARRAGVRFASECLAFANVPCDATLASIGSPAAHEPAWKRAVPRDPGAPWDFDDVR
CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCHHHHCCCCCCCCCCCHHHHH
DHYLRALYGVEPARLRSIDPARYLTLSRAVVADLVGETLAEWRRVGSSCAGALVWQFQDV
HHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MPGAGWGLVDAHGRPKSAWHALRRVSQPRQILLTDEGLNGLDVHVLNDAPAPLEARIELV
CCCCCCCEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCCCCCCCEEEEE
ALRDGKTPIARAARTVHVAAHAGQCVNSADLLGRFFDFTYAYRFGPREHDVVIASLYASD
EEECCCCHHHHHHHEEEEEHHCCCCCCHHHHHHHHHHHHEEEECCCCCCCEEEEEEECCC
GALLSQAFHFPERTAPTVFERGDIGLEASAAYRDGRWCVQVQTRTFARYVHVCAPGLLPD
CHHHHHHHCCCCCCCCCEEECCCCCCEECCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCC
IDWFHLAPGAAARIEFAADPHSPAPDHRPPEADAAHCAPPAIEVRALNSNKTIRPRIEN
CCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEECCCCCC
>Mature Secondary Structure
MKSAPDRVARGAAQWTLIATPAGAIARPSELGEAGWCAASVPGTVAQALAAARRFDPAHP
CCCCHHHHHCCCCCEEEEECCCCCCCCHHHCCCCCCEECCCCHHHHHHHHHHHHCCCCCC
YPLGDSDYWYRTTLHGAGPRIVRLNGLATIAEVWLDDTLLLCSDNMYVAHDLPVTLGGAH
CCCCCCCCEEEEEECCCCCCEEEECCHHHHHHHHHCCEEEEEECCEEEEECCCEEECCHH
RLALCFRSLDRHLAEHPPRGRARWRTRLVDTPALRGVRATFLGRMPGWFPAIEPVGPWRP
HHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
IDIVNPAGAPTIVHDTLRATLDGRDGVLDATLEFAAPLSRTARAQLVCGEHAAPLEATGP
EEEECCCCCCHHHHHHHHHHCCCCCCEEHHHHHHHCCHHHCCCEEEEECCCCCCCCCCCC
RTARATLRIANVTPWWPHTHGEPALYDVGVAIGGATIALAKTGFRTLAVERGADGRGFAL
CCEEEEEEEECCCCCCCCCCCCCCEEEEEEEECCEEEEEECCCCEEEEEECCCCCCCEEE
SVNGTPLFARGACWTSADPVGLHADAPAYRRALVLARDAGCNMIRVGGTMIYEADAFYAL
EECCCEEEECCCCCCCCCCCCCCCCCHHHHEEEEEEECCCCCEEEECCEEEEECCHHHHH
CDELGLLVWQDFMLANFDYPSNDPRFAESLKREAEQFLGRHMARPSIAVLCGGSEIAQQA
HHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHH
AMVGLAPDERRVPATEQWLAELCAAHRPDAAYVSDSPHGGVLPFAPREGVTHYYGVGAYL
HHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCEEEECCCCC
RPPEDARRAGVRFASECLAFANVPCDATLASIGSPAAHEPAWKRAVPRDPGAPWDFDDVR
CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCHHHHCCCCCCCCCCCHHHHH
DHYLRALYGVEPARLRSIDPARYLTLSRAVVADLVGETLAEWRRVGSSCAGALVWQFQDV
HHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MPGAGWGLVDAHGRPKSAWHALRRVSQPRQILLTDEGLNGLDVHVLNDAPAPLEARIELV
CCCCCCCEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCCCCCCCEEEEE
ALRDGKTPIARAARTVHVAAHAGQCVNSADLLGRFFDFTYAYRFGPREHDVVIASLYASD
EEECCCCHHHHHHHEEEEEHHCCCCCCHHHHHHHHHHHHEEEECCCCCCCEEEEEEECCC
GALLSQAFHFPERTAPTVFERGDIGLEASAAYRDGRWCVQVQTRTFARYVHVCAPGLLPD
CHHHHHHHCCCCCCCCCEEECCCCCCEECCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCC
IDWFHLAPGAAARIEFAADPHSPAPDHRPPEADAAHCAPPAIEVRALNSNKTIRPRIEN
CCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA