| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718253
Identifier: 53718253
GI number: 53718253
Start: 688607
End: 690583
Strand: Reverse
Name: 53718253
Synonym: BPSL0610
Alternate gene names: NA
Gene position: 690583-688607 (Counterclockwise)
Preceding gene: 53718254
Following gene: 53718249
Centisome position: 16.95
GC content: 73.29
Gene sequence:
>1977_bases TTGAGACCAGTTCGATTCGACGATTGCCTGGGATGGCTGCATGAGGGCCGCACGCGGCGCGGCGCCGTGATCTGCGAGGC GCTCGGCCATGAGGCGCTGTGGACGCACAAGGTGGTTCGCACGCTCGCCGAGCGCCTGGCCGACGACGGCATGTGGGTGC TGCGCTTTCACTATCCGTGCGCCGGCGATTCGGCAGGCGACGATCTCGCGCCGGGCCGGCAGCCCGCGAGCGTCGCGAGC GTGCGCCGCGCGCTCGCCGCGCTGCGCGATCTCGCGCCGGTCGACCAGGTCACGCTCGTCGGCCTGCGCGCGGGCGCCGC GTTCGCGATGCTCGCGCTCGCGGGCGAGGACGCGCCCGACGTCGACGCATTCGTCGCGCTCGCGCCCGTCGTGCGCGGGC GTGCCTATCTGCGCGAGCTGTCGGTCGTGCAAAAGCGCTGGCTCGATACGGCGCCGCCCGCGATTCGCGAGCAGCATCAT GAAGAACCGTGGCTCAACATCCTCGGCCACCGCTACCCGGCCGATTTCGTCGCCGATCTGAGGACAATCGATCTGAGCGC CGCGGTCGCCGCGACGGCTTCGCCGCCGCGCGCCGCGCTGCTCGTCGATACCGACTACGGCGACAGTCCCGCGCTGCGCG ACGCGCTCGCGGCGCGCGGCGTGCCGGCGCACGTCGAGCCGTTCCCGGAATGGCCGAACGCGCTGCAGGAAGGCGCGCGC TCGCGCGTGCCGCTCGCGGCGCTCGAGTCGGTGGCGCGCTGGATCGGCCATGGCGAGCGAGCAACACCGGAAACGAGCGC GGCCGCGCGCACGGGCGACGATGCGCGCGCGGCGGCACATGCCGCCGCCGAGCGCATCGAGAAACGCACCGATAGACTTG CTGAGAAGTGCGCCGAGAAGCACACGGAGCAGCACGACGAGCGCCTCGCCGAAAGCCGTGCCGCGCGCGCGCCGCAAGCG TCGCCGCCCATCACGTTCGCATTCGACGGCGTCGCCGAGACGCTCGTTCATGTCGGCGCGAAGCGGCTCGTCGGCACGCT GTGCGAACCCATCGTGCCCGCGCGCGCCGGCATGCCGTGCCTGCTGATCGCGAACACCGCGGCCAATCCGCGGAGCGCGG ACGGCCGCATCGGCGTGCGGCTCGCGCGCACGCTCGCGCAGCGCGGCATCGCATCGTTGCGCATCGACATCGAAGGCATC GGCGACAGCGGCGCACGCGCGCCGGACGATCAGGCCGACGTGCTGTACTCCGATCCCGCGATCGCGGACGTCGCCGCGGC CGTGGACTGGCTCGGCGCGCACTGCCGGCGCCCGGTCGTCGCGTTCGGCGTGTGCTCCGGCGCGTTCGCCGCGCTGCACG CGGCCGCGCACGCGCCCGCGGCCGCGGGCGTGATCGCGGTCAACCTGCCGCGTTTCATCTGGCCGCGCGGGCTCACGATC GCCGATGCCCGCCGGCAGCAGACGAATTCCGCGCGCGGCTATCTCGCATCGATGCGCGACTGGAGCAAATGGCGCCGCCT GCTGCGCGAAGGCCGCGATCTACGCCCGGTGCTGAGCGCGCTGCGCCGCCACGTGACCTCGCGCCTGAGCGAGCCGGCCG CACGCCTCGCGGAGCGGTTCGGCCGCCGGCCGAGCCCCGATACGCCGCGCGGGCTGCTCAGGACGCTCACCGAGCGGAAC GTGCACACGATGCTCGTCTACGGCGAGTTCGATCCGGGCGTCGACGAACTGAGCCGCTACTTCGGCTCGCCGCGCCGCGC GTTCAGGCGTTCGCCGCTCGTGAGCGTCGAGATGATCCGCCTGCTCGATCATTCGGTGTACGGCACGTCGGCGGCCGACA TGATCATCGAGCTCTGCATCGATACGCTGACGCAATGGAACGACCGCACACGCGGCTCGCGGCCCCGGCCCCGGCCGGCC GGCGCCCGGCGCGGCGCGGCGCATGCGGCGTCCGCCGACGCGGCCGCGTCCTCCTGA
Upstream 100 bases:
>100_bases ACCACCGCCCGCCCGAAGCCGACGCGGCCCACTGCGCCCCGCCCGCGATCGAGGTGCGCGCACTCAATTCCAACAAGACC ATTCGCCCGAGGATAGAAAA
Downstream 100 bases:
>100_bases CGGCGGCGCGCACGCCGGCGCGGCGCGTTCGCCGCGGCGCGCCGGCGTTTCGTTTCAATTGGCGGACGACGCGGCGCTGC GCGGGCGCTCGATGCCGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase; Hydrolase Of Alpha/Beta Superfamily; Esterase/Lipase/Thioesterase; Hydrolase; Transmembrane Teichuronic Acid Biosynthesis Protein; Polysaccharide Biosynthesis Protein
Number of amino acids: Translated: 658; Mature: 658
Protein sequence:
>658_residues MRPVRFDDCLGWLHEGRTRRGAVICEALGHEALWTHKVVRTLAERLADDGMWVLRFHYPCAGDSAGDDLAPGRQPASVAS VRRALAALRDLAPVDQVTLVGLRAGAAFAMLALAGEDAPDVDAFVALAPVVRGRAYLRELSVVQKRWLDTAPPAIREQHH EEPWLNILGHRYPADFVADLRTIDLSAAVAATASPPRAALLVDTDYGDSPALRDALAARGVPAHVEPFPEWPNALQEGAR SRVPLAALESVARWIGHGERATPETSAAARTGDDARAAAHAAAERIEKRTDRLAEKCAEKHTEQHDERLAESRAARAPQA SPPITFAFDGVAETLVHVGAKRLVGTLCEPIVPARAGMPCLLIANTAANPRSADGRIGVRLARTLAQRGIASLRIDIEGI GDSGARAPDDQADVLYSDPAIADVAAAVDWLGAHCRRPVVAFGVCSGAFAALHAAAHAPAAAGVIAVNLPRFIWPRGLTI ADARRQQTNSARGYLASMRDWSKWRRLLREGRDLRPVLSALRRHVTSRLSEPAARLAERFGRRPSPDTPRGLLRTLTERN VHTMLVYGEFDPGVDELSRYFGSPRRAFRRSPLVSVEMIRLLDHSVYGTSAADMIIELCIDTLTQWNDRTRGSRPRPRPA GARRGAAHAASADAAASS
Sequences:
>Translated_658_residues MRPVRFDDCLGWLHEGRTRRGAVICEALGHEALWTHKVVRTLAERLADDGMWVLRFHYPCAGDSAGDDLAPGRQPASVAS VRRALAALRDLAPVDQVTLVGLRAGAAFAMLALAGEDAPDVDAFVALAPVVRGRAYLRELSVVQKRWLDTAPPAIREQHH EEPWLNILGHRYPADFVADLRTIDLSAAVAATASPPRAALLVDTDYGDSPALRDALAARGVPAHVEPFPEWPNALQEGAR SRVPLAALESVARWIGHGERATPETSAAARTGDDARAAAHAAAERIEKRTDRLAEKCAEKHTEQHDERLAESRAARAPQA SPPITFAFDGVAETLVHVGAKRLVGTLCEPIVPARAGMPCLLIANTAANPRSADGRIGVRLARTLAQRGIASLRIDIEGI GDSGARAPDDQADVLYSDPAIADVAAAVDWLGAHCRRPVVAFGVCSGAFAALHAAAHAPAAAGVIAVNLPRFIWPRGLTI ADARRQQTNSARGYLASMRDWSKWRRLLREGRDLRPVLSALRRHVTSRLSEPAARLAERFGRRPSPDTPRGLLRTLTERN VHTMLVYGEFDPGVDELSRYFGSPRRAFRRSPLVSVEMIRLLDHSVYGTSAADMIIELCIDTLTQWNDRTRGSRPRPRPA GARRGAAHAASADAAASS >Mature_658_residues MRPVRFDDCLGWLHEGRTRRGAVICEALGHEALWTHKVVRTLAERLADDGMWVLRFHYPCAGDSAGDDLAPGRQPASVAS VRRALAALRDLAPVDQVTLVGLRAGAAFAMLALAGEDAPDVDAFVALAPVVRGRAYLRELSVVQKRWLDTAPPAIREQHH EEPWLNILGHRYPADFVADLRTIDLSAAVAATASPPRAALLVDTDYGDSPALRDALAARGVPAHVEPFPEWPNALQEGAR SRVPLAALESVARWIGHGERATPETSAAARTGDDARAAAHAAAERIEKRTDRLAEKCAEKHTEQHDERLAESRAARAPQA SPPITFAFDGVAETLVHVGAKRLVGTLCEPIVPARAGMPCLLIANTAANPRSADGRIGVRLARTLAQRGIASLRIDIEGI GDSGARAPDDQADVLYSDPAIADVAAAVDWLGAHCRRPVVAFGVCSGAFAALHAAAHAPAAAGVIAVNLPRFIWPRGLTI ADARRQQTNSARGYLASMRDWSKWRRLLREGRDLRPVLSALRRHVTSRLSEPAARLAERFGRRPSPDTPRGLLRTLTERN VHTMLVYGEFDPGVDELSRYFGSPRRAFRRSPLVSVEMIRLLDHSVYGTSAADMIIELCIDTLTQWNDRTRGSRPRPRPA GARRGAAHAASADAAASS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71132; Mature: 71132
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPVRFDDCLGWLHEGRTRRGAVICEALGHEALWTHKVVRTLAERLADDGMWVLRFHYPC CCCCCHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCC AGDSAGDDLAPGRQPASVASVRRALAALRDLAPVDQVTLVGLRAGAAFAMLALAGEDAPD CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC VDAFVALAPVVRGRAYLRELSVVQKRWLDTAPPAIREQHHEEPWLNILGHRYPADFVADL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHCCCCCHHHHHHH RTIDLSAAVAATASPPRAALLVDTDYGDSPALRDALAARGVPAHVEPFPEWPNALQEGAR HHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH SRVPLAALESVARWIGHGERATPETSAAARTGDDARAAAHAAAERIEKRTDRLAEKCAEK CCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH HTEQHDERLAESRAARAPQASPPITFAFDGVAETLVHVGAKRLVGTLCEPIVPARAGMPC HHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE LLIANTAANPRSADGRIGVRLARTLAQRGIASLRIDIEGIGDSGARAPDDQADVLYSDPA EEEECCCCCCCCCCCHHHHHHHHHHHHCCHHEEEEEEEECCCCCCCCCCCCCCEEECCCH IADVAAAVDWLGAHCRRPVVAFGVCSGAFAALHAAAHAPAAAGVIAVNLPRFIWPRGLTI HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHCCEEEECCCHHHCCCCCCH ADARRQQTNSARGYLASMRDWSKWRRLLREGRDLRPVLSALRRHVTSRLSEPAARLAERF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GRRPSPDTPRGLLRTLTERNVHTMLVYGEFDPGVDELSRYFGSPRRAFRRSPLVSVEMIR CCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCHHHHHHCCCCHHHHHHH LLDHSVYGTSAADMIIELCIDTLTQWNDRTRGSRPRPRPAGARRGAAHAASADAAASS HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC >Mature Secondary Structure MRPVRFDDCLGWLHEGRTRRGAVICEALGHEALWTHKVVRTLAERLADDGMWVLRFHYPC CCCCCHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCC AGDSAGDDLAPGRQPASVASVRRALAALRDLAPVDQVTLVGLRAGAAFAMLALAGEDAPD CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC VDAFVALAPVVRGRAYLRELSVVQKRWLDTAPPAIREQHHEEPWLNILGHRYPADFVADL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHCCCCCHHHHHHH RTIDLSAAVAATASPPRAALLVDTDYGDSPALRDALAARGVPAHVEPFPEWPNALQEGAR HHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH SRVPLAALESVARWIGHGERATPETSAAARTGDDARAAAHAAAERIEKRTDRLAEKCAEK CCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH HTEQHDERLAESRAARAPQASPPITFAFDGVAETLVHVGAKRLVGTLCEPIVPARAGMPC HHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE LLIANTAANPRSADGRIGVRLARTLAQRGIASLRIDIEGIGDSGARAPDDQADVLYSDPA EEEECCCCCCCCCCCHHHHHHHHHHHHCCHHEEEEEEEECCCCCCCCCCCCCCEEECCCH IADVAAAVDWLGAHCRRPVVAFGVCSGAFAALHAAAHAPAAAGVIAVNLPRFIWPRGLTI HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHCCEEEECCCHHHCCCCCCH ADARRQQTNSARGYLASMRDWSKWRRLLREGRDLRPVLSALRRHVTSRLSEPAARLAERF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GRRPSPDTPRGLLRTLTERNVHTMLVYGEFDPGVDELSRYFGSPRRAFRRSPLVSVEMIR CCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCHHHHHHCCCCHHHHHHH LLDHSVYGTSAADMIIELCIDTLTQWNDRTRGSRPRPRPAGARRGAAHAASADAAASS HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA