Click here to switch to the map view.

The map label for this gene is 53718225

Identifier: 53718225

GI number: 53718225

Start: 646155

End: 647489

Strand: Reverse

Name: 53718225

Synonym: BPSL0583

Alternate gene names: NA

Gene position: 647489-646155 (Counterclockwise)

Preceding gene: 53718226

Following gene: 53718224

Centisome position: 15.89

GC content: 50.26

Gene sequence:

>1335_bases
ATGTTCACCGCGGAGAACTTCCGTCGCATATATGATGCCGAGAACCGCAAGGGCATCGACTTGGCAACCCGCTATTTTCC
GAGTCTCGAACCGTTCACACTCGCTGTGCGCGACAAGGTGCAAGAAATTCGCGATCTACGGAAAGTCGAAACTACACTGA
CGGCTGAAGATTTCAAGGCGCAGTTGCTTGCGTTGAAGGCTGAACTAGTTGTGTTGAAAGAAGATAAGTCGTCCGCCATC
GATATCCTGATGGGTGACATCAGCCAGAAGGTCCTCCAGCCGAGCTTCAAGATCGACCTTTCCCAAAAGACCGGGCCGAA
GGGGAAGCCAGTTTTCTGCATCGACGCGGACCCGGAGACGTTCTTCGTTATCAAGCAGCTTCAGCATAATATTCATCGAA
TCTATAGCATCAAACAAGCCAACCGTCACGACTTGGTCTGCCAGCTGCGCGATATGCTCGGGAGCAAATTTCCGTTCGAG
TTGGTTCGCACCGACATCTCGTCATTTTATGAAAGTATCAATCGCAAGCACTTAGTCGAAAAGCTGGATCGCGACCAGTT
ATTGAGCCCTGCATCAAAAAAATACATCAAACAGGCACTGGATTCTTACGGCACGATTTCCGGTGCCCTGATCGGCATTC
CCCGGGGTGTTGGCATCAGCGCATATTTGGCTGAGCTATATTTGCGGCCGGTCGATAAGGCAATCCGGGCGATCCCAGGC
TTGGTCCTGTACTGCCGGTTTGTCGATGACATCGTAGCGGTCTTTGCACGACCGCCGATAGGAAAGAGCCTCGGCTCGTT
CAAGGATAGGATCATCGCCATCTTCGGCGACAGCGGCCTCGCACACAACTCGGCCAAAACGTCGGAATTCAAACTGGCAG
ACACGAGTACAAAGAAGTTTGAGTATCTTGGTTATCGCTTCCTTCTCAAACCAAGCCAATTTAAAATTAGCCCGAGCGCA
GCCAAGGTCACGAAATATCGTGCGCGAATGGATGCCGCATTCGAAGACTATTGGCGGGAGAGACCGATCAACCCGAAGGG
TGCATTCAGGAAACTCGTGGGCCGCATAAAGTTCCTGACGGGAAATACGCGTCTTTCCAACAGCAAGTCATGTGCGGTAA
CTGGTATATATTTTAATAATTCGATCGTAACTGATTTGTCGAGTTTTCAGTTGCTCGATAAGCGGCTCAAGGCTCGCATC
GCGGAACTAAAGCGAACCAGCCTGCAAAATCAGTTAAAAAAACTTAGATTCACCACTGGTTTTGAGGAGCGCCGATACCA
CAATTTCAGTACGAAAGAACTGCAGACAATTGTGAGGGCATGGAAACATGGCTGA

Upstream 100 bases:

>100_bases
GGGTCGCTCACGCATGTCGGCGTCATTGCCCTCGCTTCGCTCGACCTTTGTCGCGTACAACTGAATCAAATGGAATGGGT
ATCCAGTGATGATCGACCAA

Downstream 100 bases:

>100_bases
ACGACGCATTTCGCTCACCCACAGGAAACAAAGGCCCGTGCTGACGGATATGCTGCCGTTCGAGGTGCCTCCTACATTCT
CCAATCGGGGCTATTATCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Reverse Transcriptase/Maturase Family Protein; Maturase Protein; Retron-Type Reverse Transcriptase; Reverse Transcriptase Domain Protein

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MFTAENFRRIYDAENRKGIDLATRYFPSLEPFTLAVRDKVQEIRDLRKVETTLTAEDFKAQLLALKAELVVLKEDKSSAI
DILMGDISQKVLQPSFKIDLSQKTGPKGKPVFCIDADPETFFVIKQLQHNIHRIYSIKQANRHDLVCQLRDMLGSKFPFE
LVRTDISSFYESINRKHLVEKLDRDQLLSPASKKYIKQALDSYGTISGALIGIPRGVGISAYLAELYLRPVDKAIRAIPG
LVLYCRFVDDIVAVFARPPIGKSLGSFKDRIIAIFGDSGLAHNSAKTSEFKLADTSTKKFEYLGYRFLLKPSQFKISPSA
AKVTKYRARMDAAFEDYWRERPINPKGAFRKLVGRIKFLTGNTRLSNSKSCAVTGIYFNNSIVTDLSSFQLLDKRLKARI
AELKRTSLQNQLKKLRFTTGFEERRYHNFSTKELQTIVRAWKHG

Sequences:

>Translated_444_residues
MFTAENFRRIYDAENRKGIDLATRYFPSLEPFTLAVRDKVQEIRDLRKVETTLTAEDFKAQLLALKAELVVLKEDKSSAI
DILMGDISQKVLQPSFKIDLSQKTGPKGKPVFCIDADPETFFVIKQLQHNIHRIYSIKQANRHDLVCQLRDMLGSKFPFE
LVRTDISSFYESINRKHLVEKLDRDQLLSPASKKYIKQALDSYGTISGALIGIPRGVGISAYLAELYLRPVDKAIRAIPG
LVLYCRFVDDIVAVFARPPIGKSLGSFKDRIIAIFGDSGLAHNSAKTSEFKLADTSTKKFEYLGYRFLLKPSQFKISPSA
AKVTKYRARMDAAFEDYWRERPINPKGAFRKLVGRIKFLTGNTRLSNSKSCAVTGIYFNNSIVTDLSSFQLLDKRLKARI
AELKRTSLQNQLKKLRFTTGFEERRYHNFSTKELQTIVRAWKHG
>Mature_444_residues
MFTAENFRRIYDAENRKGIDLATRYFPSLEPFTLAVRDKVQEIRDLRKVETTLTAEDFKAQLLALKAELVVLKEDKSSAI
DILMGDISQKVLQPSFKIDLSQKTGPKGKPVFCIDADPETFFVIKQLQHNIHRIYSIKQANRHDLVCQLRDMLGSKFPFE
LVRTDISSFYESINRKHLVEKLDRDQLLSPASKKYIKQALDSYGTISGALIGIPRGVGISAYLAELYLRPVDKAIRAIPG
LVLYCRFVDDIVAVFARPPIGKSLGSFKDRIIAIFGDSGLAHNSAKTSEFKLADTSTKKFEYLGYRFLLKPSQFKISPSA
AKVTKYRARMDAAFEDYWRERPINPKGAFRKLVGRIKFLTGNTRLSNSKSCAVTGIYFNNSIVTDLSSFQLLDKRLKARI
AELKRTSLQNQLKKLRFTTGFEERRYHNFSTKELQTIVRAWKHG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50658; Mature: 50658

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: PS50878 RT_POL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTAENFRRIYDAENRKGIDLATRYFPSLEPFTLAVRDKVQEIRDLRKVETTLTAEDFKA
CCCHHHHHHHHCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLLALKAELVVLKEDKSSAIDILMGDISQKVLQPSFKIDLSQKTGPKGKPVFCIDADPET
HHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCCH
FFVIKQLQHNIHRIYSIKQANRHDLVCQLRDMLGSKFPFELVRTDISSFYESINRKHLVE
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
KLDRDQLLSPASKKYIKQALDSYGTISGALIGIPRGVGISAYLAELYLRPVDKAIRAIPG
HHCHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
LVLYCRFVDDIVAVFARPPIGKSLGSFKDRIIAIFGDSGLAHNSAKTSEFKLADTSTKKF
HHHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEEECCCCCCCCCCCCCCEEEECCCCHHH
EYLGYRFLLKPSQFKISPSAAKVTKYRARMDAAFEDYWRERPINPKGAFRKLVGRIKFLT
HHHCEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEEE
GNTRLSNSKSCAVTGIYFNNSIVTDLSSFQLLDKRLKARIAELKRTSLQNQLKKLRFTTG
CCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FEERRYHNFSTKELQTIVRAWKHG
HHHHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MFTAENFRRIYDAENRKGIDLATRYFPSLEPFTLAVRDKVQEIRDLRKVETTLTAEDFKA
CCCHHHHHHHHCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLLALKAELVVLKEDKSSAIDILMGDISQKVLQPSFKIDLSQKTGPKGKPVFCIDADPET
HHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCCH
FFVIKQLQHNIHRIYSIKQANRHDLVCQLRDMLGSKFPFELVRTDISSFYESINRKHLVE
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
KLDRDQLLSPASKKYIKQALDSYGTISGALIGIPRGVGISAYLAELYLRPVDKAIRAIPG
HHCHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
LVLYCRFVDDIVAVFARPPIGKSLGSFKDRIIAIFGDSGLAHNSAKTSEFKLADTSTKKF
HHHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEEECCCCCCCCCCCCCCEEEECCCCHHH
EYLGYRFLLKPSQFKISPSAAKVTKYRARMDAAFEDYWRERPINPKGAFRKLVGRIKFLT
HHHCEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEEE
GNTRLSNSKSCAVTGIYFNNSIVTDLSSFQLLDKRLKARIAELKRTSLQNQLKKLRFTTG
CCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FEERRYHNFSTKELQTIVRAWKHG
HHHHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA