| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718226
Identifier: 53718226
GI number: 53718226
Start: 648080
End: 649468
Strand: Reverse
Name: 53718226
Synonym: BPSL0584
Alternate gene names: NA
Gene position: 649468-648080 (Counterclockwise)
Preceding gene: 53718227
Following gene: 53718225
Centisome position: 15.94
GC content: 57.6
Gene sequence:
>1389_bases ATGAAGACGTTCGTCGCTGCGATACTGGTTGCTGACCTCATGATAGCCGGACAGGCGGCGGCCGATGCCATCCAGCCGAA CCAAACGGCTGCTACCGTCAAATATGCGGACGTGGTCCAGTTGTTTCCCAACGCGCTCTATCCTAGCAAGCACGGCGCCT TGACGACCTATGACGGACTGCATCTAAGAGGGAACGGGTTTGATGCCGTCAATCCGGCAGCGAATATCTTGCTTATTGAT GGCAATCGCGCGTTGCAGATGTGTGTACAAGACAAACCCACGGCGGGATGCACGCCCGGCTTTTCGGTTGCAGGAATCAC CGGTGGAACCGAACTGGAGGTGAATGGCATTCCTGAGAATTTCAAGGGATTCAGGCGCATTGCCGTCGCTACCACGTCGG GCGCGCAAGGCTTGGGTACCGCCATTCCGTCTTCAGCGCCGACGGTGACGTTCTCGCCATTCGGAGCCATCTGGCCGCGA GTCGCGGCTTTGATCGTGCTAGTCGCCTCGATCTCGCTGGTGCCGATCGTGTTCCGGAGGCGTGTCCCGTTGTCTGGCGC ACCTGCCGGTACGATGATCCGTCAATGGCAATTGCTGCTGGTGGAGCCAGACACCAATACGTTCAGCCTTTCGCGACTGC AACTGGTCGTCTGGACGTTCGTCGCGCTTTTTGCGTGGAGTTACCTAAGCATCGCGCGTAGCGTTATTCAGATGACACCC ACCTTCGGGGATATTCCTGGCAGTCTGGCTGGTCTGCTCGGGATATCGGTTGGTGCTACCGTCTCGACGCTGACGCTGAA CGTAGTCAAAGGTGGAAAAGCCGCCGGGCCGACGAGTCCGTCATTTTCAGACTTCATTTCGGTCGGAGGCGTGGTCGCGC CGGACCGGCTGCAGTATTTGCTTTGGACGGTTGTCGGCGCAATCGCGTATGTCACGCTAACGCTGAGTCTCGACCCAGCG AGGATTCAGCAATATATCGAACTTCCTACCGGATTTCTCACGTTATCGGGAATCAGCGCAGCGGGATATCTGGGAGCGCG CATTGCCCGAAGCGCTGGCCCAATCGTCTCACGTGTGACCGCGGCACCGGATGCGGAAACGCAGGCGGTTACGCTGACAG TCGAAGGGACGGCATTATCGAAGTCGGGGAAGTATCTGATCGCGTATTCGACGAACAACGGTTATGGCAGCGCAGTCGCC ATCACTGCGAGCGAGCTGCAGCTTCCCATCGTCGCAAATGTAGAGGATCAGGACGGGAGTCCAGATCTCTACAAGAAGTT GGTAATCGTCTTCAAGCCAGCGAGGGGTAACTGGTTCGGCCAGCAGTCTCAGAAAGGGCAATTCTCCATCATCAATCCAG ACGGACAGCGGGCCGACTGGCCTTTTTAG
Upstream 100 bases:
>100_bases GCCGCTTTGCAGATCGGCATTAATGCGTTCGTTAATAACTTGTATACAGCGCTCCTCAGCACCGTGAAGCTGGTCTGACT GCGCACATGGAGTTATAGAA
Downstream 100 bases:
>100_bases CGTTGTGAGCGAACGGGACAGCTCGAAGCGGCACGAGCGTGCAGGGCACTCTGCTCAGAGAGTATCGTTGCACTGACAGC CGGTATCGGCGGTCAGACAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 462; Mature: 462
Protein sequence:
>462_residues MKTFVAAILVADLMIAGQAAADAIQPNQTAATVKYADVVQLFPNALYPSKHGALTTYDGLHLRGNGFDAVNPAANILLID GNRALQMCVQDKPTAGCTPGFSVAGITGGTELEVNGIPENFKGFRRIAVATTSGAQGLGTAIPSSAPTVTFSPFGAIWPR VAALIVLVASISLVPIVFRRRVPLSGAPAGTMIRQWQLLLVEPDTNTFSLSRLQLVVWTFVALFAWSYLSIARSVIQMTP TFGDIPGSLAGLLGISVGATVSTLTLNVVKGGKAAGPTSPSFSDFISVGGVVAPDRLQYLLWTVVGAIAYVTLTLSLDPA RIQQYIELPTGFLTLSGISAAGYLGARIARSAGPIVSRVTAAPDAETQAVTLTVEGTALSKSGKYLIAYSTNNGYGSAVA ITASELQLPIVANVEDQDGSPDLYKKLVIVFKPARGNWFGQQSQKGQFSIINPDGQRADWPF
Sequences:
>Translated_462_residues MKTFVAAILVADLMIAGQAAADAIQPNQTAATVKYADVVQLFPNALYPSKHGALTTYDGLHLRGNGFDAVNPAANILLID GNRALQMCVQDKPTAGCTPGFSVAGITGGTELEVNGIPENFKGFRRIAVATTSGAQGLGTAIPSSAPTVTFSPFGAIWPR VAALIVLVASISLVPIVFRRRVPLSGAPAGTMIRQWQLLLVEPDTNTFSLSRLQLVVWTFVALFAWSYLSIARSVIQMTP TFGDIPGSLAGLLGISVGATVSTLTLNVVKGGKAAGPTSPSFSDFISVGGVVAPDRLQYLLWTVVGAIAYVTLTLSLDPA RIQQYIELPTGFLTLSGISAAGYLGARIARSAGPIVSRVTAAPDAETQAVTLTVEGTALSKSGKYLIAYSTNNGYGSAVA ITASELQLPIVANVEDQDGSPDLYKKLVIVFKPARGNWFGQQSQKGQFSIINPDGQRADWPF >Mature_462_residues MKTFVAAILVADLMIAGQAAADAIQPNQTAATVKYADVVQLFPNALYPSKHGALTTYDGLHLRGNGFDAVNPAANILLID GNRALQMCVQDKPTAGCTPGFSVAGITGGTELEVNGIPENFKGFRRIAVATTSGAQGLGTAIPSSAPTVTFSPFGAIWPR VAALIVLVASISLVPIVFRRRVPLSGAPAGTMIRQWQLLLVEPDTNTFSLSRLQLVVWTFVALFAWSYLSIARSVIQMTP TFGDIPGSLAGLLGISVGATVSTLTLNVVKGGKAAGPTSPSFSDFISVGGVVAPDRLQYLLWTVVGAIAYVTLTLSLDPA RIQQYIELPTGFLTLSGISAAGYLGARIARSAGPIVSRVTAAPDAETQAVTLTVEGTALSKSGKYLIAYSTNNGYGSAVA ITASELQLPIVANVEDQDGSPDLYKKLVIVFKPARGNWFGQQSQKGQFSIINPDGQRADWPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48429; Mature: 48429
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTFVAAILVADLMIAGQAAADAIQPNQTAATVKYADVVQLFPNALYPSKHGALTTYDGL CHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCEEEECCE HLRGNGFDAVNPAANILLIDGNRALQMCVQDKPTAGCTPGFSVAGITGGTELEVNGIPEN EEECCCCCCCCCCCEEEEEECCHHHHHEECCCCCCCCCCCCEEEEECCCCEEEECCCCHH FKGFRRIAVATTSGAQGLGTAIPSSAPTVTFSPFGAIWPRVAALIVLVASISLVPIVFRR HHCCEEEEEEECCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHC RVPLSGAPAGTMIRQWQLLLVEPDTNTFSLSRLQLVVWTFVALFAWSYLSIARSVIQMTP CCCCCCCCCCHHEEEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TFGDIPGSLAGLLGISVGATVSTLTLNVVKGGKAAGPTSPSFSDFISVGGVVAPDRLQYL CCCCCCHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHCCCCCHHHHHHH LWTVVGAIAYVTLTLSLDPARIQQYIELPTGFLTLSGISAAGYLGARIARSAGPIVSRVT HHHHHHHHHEEEEEEECCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCHHHHEE AAPDAETQAVTLTVEGTALSKSGKYLIAYSTNNGYGSAVAITASELQLPIVANVEDQDGS CCCCCCCEEEEEEEECEEECCCCCEEEEEECCCCCCCEEEEEHHHEEEEEEECCCCCCCC PDLYKKLVIVFKPARGNWFGQQSQKGQFSIINPDGQRADWPF HHHHEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCC >Mature Secondary Structure MKTFVAAILVADLMIAGQAAADAIQPNQTAATVKYADVVQLFPNALYPSKHGALTTYDGL CHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCEEEECCE HLRGNGFDAVNPAANILLIDGNRALQMCVQDKPTAGCTPGFSVAGITGGTELEVNGIPEN EEECCCCCCCCCCCEEEEEECCHHHHHEECCCCCCCCCCCCEEEEECCCCEEEECCCCHH FKGFRRIAVATTSGAQGLGTAIPSSAPTVTFSPFGAIWPRVAALIVLVASISLVPIVFRR HHCCEEEEEEECCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHC RVPLSGAPAGTMIRQWQLLLVEPDTNTFSLSRLQLVVWTFVALFAWSYLSIARSVIQMTP CCCCCCCCCCHHEEEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TFGDIPGSLAGLLGISVGATVSTLTLNVVKGGKAAGPTSPSFSDFISVGGVVAPDRLQYL CCCCCCHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHCCCCCHHHHHHH LWTVVGAIAYVTLTLSLDPARIQQYIELPTGFLTLSGISAAGYLGARIARSAGPIVSRVT HHHHHHHHHEEEEEEECCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCHHHHEE AAPDAETQAVTLTVEGTALSKSGKYLIAYSTNNGYGSAVAITASELQLPIVANVEDQDGS CCCCCCCEEEEEEEECEEECCCCCEEEEEECCCCCCCEEEEEHHHEEEEEEECCCCCCCC PDLYKKLVIVFKPARGNWFGQQSQKGQFSIINPDGQRADWPF HHHHEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA