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The map label for this gene is ysgA [C]

Identifier: 53718220

GI number: 53718220

Start: 640045

End: 640776

Strand: Reverse

Name: ysgA [C]

Synonym: BPSL0578

Alternate gene names: 53718220

Gene position: 640776-640045 (Counterclockwise)

Preceding gene: 53718222

Following gene: 53718219

Centisome position: 15.73

GC content: 69.13

Gene sequence:

>732_bases
ATGGGGACACGCTCGATCGCCTACGATTGCGGAGGCGCCCGGTTGACGGGCTACTTCGCCGACGACGCGCCGAATACGAA
AAAACCCGCGGTCCTGATCGCGCACGAGGCTTTCGGGCTGAACGAGCATATCCGGGCGAGAGCGAGACGGCTGGCCGAAC
TCGGCTATGCGGCATTCGCCCTCGACATGTACGGCGCCGAGGGATTCCCGATGCCGGAAGCCATACGCCGGCATATCGAA
TTGATGTCCACGCCGGGCCTCATGCACGCGCGCGCAAGCGCCGCGCTCTCCGTCCTGATGGAACAGCCGGGCGTGGACCG
GGAGCGGGTCGCGGCCATCGGCTTCTGCCAGGGCGGCATCAGCGCGCTCGAGCTCGCGCGCGGCGGCGCGCCCATTCGCT
GCGCGGTGGGCTTCCATCCCGGCCTGATGCGGCCGGCGGGCAGTCAGGACGGGCCGATCCGCGCGAAGGTCCTGATGATG
ATCGGCGCGCGCGACCCCGACGTGCCGGCGGCGGACCAAGCCGCGTTCGCGGCGGAAATGCAGGAAAAGCAGGTGGACTG
GCAGCTTCATCTCTTCGGCGGCGTCGGCCATGCCTACACGAATCCCGACGCCGACGGGTGGAACAAGCCCGGCTACGGCT
ACAGCCGCGCCGCGGACCAGCGGGCATGGACGATGATGCTCGCGCTGTTCGACGAAGTGTTCGGCGGCGCAGCCGCCGTC
GGCAAGGCGTGA

Upstream 100 bases:

>100_bases
TTCCCGCTTGCGCGGCCTCGACGCGGCGCGGCGGCGAATTCTCGTAACATCCGTTGACGCCGACTCTCACGACCTATACC
GCGCAAGGAGACAACCGACC

Downstream 100 bases:

>100_bases
ATGTCGGCGCGTTGAAGCGCGGTCGAATTCGCGCCCTCCGTCTGAACGACGGAGAAAAGAAAAACCCCGCGCAAGGGCGG
GGTTGATTTCTGCATGCCGC

Product: dienelactone hydrolase family protein

Products: NA

Alternate protein names: Dienelactone hydrolase; DLH [H]

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MGTRSIAYDCGGARLTGYFADDAPNTKKPAVLIAHEAFGLNEHIRARARRLAELGYAAFALDMYGAEGFPMPEAIRRHIE
LMSTPGLMHARASAALSVLMEQPGVDRERVAAIGFCQGGISALELARGGAPIRCAVGFHPGLMRPAGSQDGPIRAKVLMM
IGARDPDVPAADQAAFAAEMQEKQVDWQLHLFGGVGHAYTNPDADGWNKPGYGYSRAADQRAWTMMLALFDEVFGGAAAV
GKA

Sequences:

>Translated_243_residues
MGTRSIAYDCGGARLTGYFADDAPNTKKPAVLIAHEAFGLNEHIRARARRLAELGYAAFALDMYGAEGFPMPEAIRRHIE
LMSTPGLMHARASAALSVLMEQPGVDRERVAAIGFCQGGISALELARGGAPIRCAVGFHPGLMRPAGSQDGPIRAKVLMM
IGARDPDVPAADQAAFAAEMQEKQVDWQLHLFGGVGHAYTNPDADGWNKPGYGYSRAADQRAWTMMLALFDEVFGGAAAV
GKA
>Mature_242_residues
GTRSIAYDCGGARLTGYFADDAPNTKKPAVLIAHEAFGLNEHIRARARRLAELGYAAFALDMYGAEGFPMPEAIRRHIEL
MSTPGLMHARASAALSVLMEQPGVDRERVAAIGFCQGGISALELARGGAPIRCAVGFHPGLMRPAGSQDGPIRAKVLMMI
GARDPDVPAADQAAFAAEMQEKQVDWQLHLFGGVGHAYTNPDADGWNKPGYGYSRAADQRAWTMMLALFDEVFGGAAAVG
KA

Specific function: Unknown

COG id: COG0412

COG function: function code Q; Dienelactone hydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dienelactone hydrolase family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17532655, Length=248, Percent_Identity=31.0483870967742, Blast_Score=110, Evalue=7e-25,
Organism=Caenorhabditis elegans, GI17536419, Length=239, Percent_Identity=31.3807531380753, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI193204305, Length=209, Percent_Identity=29.1866028708134, Blast_Score=90, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI17532653, Length=219, Percent_Identity=31.0502283105023, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17536415, Length=218, Percent_Identity=26.605504587156, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17534829, Length=155, Percent_Identity=30.9677419354839, Blast_Score=72, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925 [H]

Pfam domain/function: PF01738 DLH [H]

EC number: =3.1.1.45 [H]

Molecular weight: Translated: 25874; Mature: 25743

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTRSIAYDCGGARLTGYFADDAPNTKKPAVLIAHEAFGLNEHIRARARRLAELGYAAFA
CCCCCEEEECCCCEEEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
LDMYGAEGFPMPEAIRRHIELMSTPGLMHARASAALSVLMEQPGVDRERVAAIGFCQGGI
HHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHEEHHCCCCH
SALELARGGAPIRCAVGFHPGLMRPAGSQDGPIRAKVLMMIGARDPDVPAADQAAFAAEM
HHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHH
QEKQVDWQLHLFGGVGHAYTNPDADGWNKPGYGYSRAADQRAWTMMLALFDEVFGGAAAV
HHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHC
GKA
CCC
>Mature Secondary Structure 
GTRSIAYDCGGARLTGYFADDAPNTKKPAVLIAHEAFGLNEHIRARARRLAELGYAAFA
CCCCEEEECCCCEEEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
LDMYGAEGFPMPEAIRRHIELMSTPGLMHARASAALSVLMEQPGVDRERVAAIGFCQGGI
HHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHEEHHCCCCH
SALELARGGAPIRCAVGFHPGLMRPAGSQDGPIRAKVLMMIGARDPDVPAADQAAFAAEM
HHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHH
QEKQVDWQLHLFGGVGHAYTNPDADGWNKPGYGYSRAADQRAWTMMLALFDEVFGGAAAV
HHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHC
GKA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]