Click here to switch to the map view.

The map label for this gene is 53718219

Identifier: 53718219

GI number: 53718219

Start: 637433

End: 638611

Strand: Reverse

Name: 53718219

Synonym: BPSL0577

Alternate gene names: NA

Gene position: 638611-637433 (Counterclockwise)

Preceding gene: 53718220

Following gene: 53718218

Centisome position: 15.67

GC content: 54.45

Gene sequence:

>1179_bases
ATGCCGCAGGGATATCACGTTAAGATTCTAACGCTCCAGCGAGGCATTAATCGCGGGGAGCGCATCTCCATATTGCTAGA
TGGTTCTCGTGAACCGGTGACTCTCGCAAATGAGCACATGCTTTGCGGGAAGCGATTACTCCTCTCACCCAACACTTATT
TCAATCACCTTTCACACATCGCCCTGATATACAAGTGGGCGGATGAGCACAACATATCGGTAGCCCAGAGGTTGCTTGGG
GGCATCGGTTTTGCCAATTATGAGGTGAGCTCAATCTTCGCAACAGTCCGAAAGCGTCAACGGCAAGCCAAGCCCGGCAC
GATGATTGTCGGCAAAACGGAGCAAAGAGCGCGCATGGTCCGAATAAAGAACTTCGTGATTAGCGGGATGGAAACCGCCA
CGGCAAATCTCGACCCACGAACCGACACGGAAAAGCTGAACGCGCTTGAATATCGCGTGGAAACGACACGAACACTGTTT
GAGCAAACAACGCCGAGCAAGGAACGCTCGCCATCGAAGAAAGGACTCACGGCAGAGTCGGTGCAATTGCTGGCAGATAC
ACTTTCTCCAGGGAGCGCGAATAATCCCTGGAGAAAGCCGCTAGTCCAGCATCGCAATTTCATACTCGTCATGCTCTATT
TGGTCACCGGCTGTCGCCGAGGTGACTTGGCCAAGGTAAAACTATCCGACATCGTGCATGAACAAACACCCTACATCCGC
TTTGACGCACACGTCAGTGACCCTAACGACAGACGGCCTGCTGAGCCGAGGCTGAAAACGCTGTCTCGCGAGTACCCCAT
TCATACGACGGTTGCCGATGCCGTTAGCCGGTACATCGCCCAACATCGGGTGGAAATCCCGAACGCGGCCGACAGCGAGT
ACCTATTCCTCGAAACCAGCGAAGGGCGTGAACTCGCTATGCGGACGGTCAATGCCATCTTCGAGACGTTACAAAGCGTC
ATTCCTGACCTCACGCCGCACATTTTGCGGCACACGAAAACCGAAAGCCTGCTCCGAGACGCAGAAGCGATGGGGCTGAC
GGAAACACAAGTTCTCGAGACCGTCATGTATCTCAACGGCTGGCGAACAGACAACCGGGCAACATACACGGCCCGCAAAC
GTGAGGAAGTCGCACGCCGCGTTGCCACCGCCCGACAAGAGGAGTTCTTCGTCAAATGA

Upstream 100 bases:

>100_bases
TCGTCCGTAGCAAAACACCGAAATGAGCGAAACCGATAATCCCGGCAACAATCTCCCGGCAACTGATATCCAGCAGCAGC
CCGGCACACCGCCCCCGCCA

Downstream 100 bases:

>100_bases
TGGACTACCAGAAGAACTTTCTCGACGTCTATGGCAATCCGGTCATCGTTGAGCCTCACCGATGGACCATTGCTACATCG
CGTGGAATCGAGGGGCTGCC

Product: phage integrase family protein

Products: NA

Alternate protein names: Integrase Family Protein; Phage Integrase Family Protein; Integrase/Recombinase; Integrase; Site-Specific Recombinase Phage Integrase Family; Site Specific Recombinase; Tyrosine Recombinase XerD; Phage Integrase Family Site Specific Recombinase

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MPQGYHVKILTLQRGINRGERISILLDGSREPVTLANEHMLCGKRLLLSPNTYFNHLSHIALIYKWADEHNISVAQRLLG
GIGFANYEVSSIFATVRKRQRQAKPGTMIVGKTEQRARMVRIKNFVISGMETATANLDPRTDTEKLNALEYRVETTRTLF
EQTTPSKERSPSKKGLTAESVQLLADTLSPGSANNPWRKPLVQHRNFILVMLYLVTGCRRGDLAKVKLSDIVHEQTPYIR
FDAHVSDPNDRRPAEPRLKTLSREYPIHTTVADAVSRYIAQHRVEIPNAADSEYLFLETSEGRELAMRTVNAIFETLQSV
IPDLTPHILRHTKTESLLRDAEAMGLTETQVLETVMYLNGWRTDNRATYTARKREEVARRVATARQEEFFVK

Sequences:

>Translated_392_residues
MPQGYHVKILTLQRGINRGERISILLDGSREPVTLANEHMLCGKRLLLSPNTYFNHLSHIALIYKWADEHNISVAQRLLG
GIGFANYEVSSIFATVRKRQRQAKPGTMIVGKTEQRARMVRIKNFVISGMETATANLDPRTDTEKLNALEYRVETTRTLF
EQTTPSKERSPSKKGLTAESVQLLADTLSPGSANNPWRKPLVQHRNFILVMLYLVTGCRRGDLAKVKLSDIVHEQTPYIR
FDAHVSDPNDRRPAEPRLKTLSREYPIHTTVADAVSRYIAQHRVEIPNAADSEYLFLETSEGRELAMRTVNAIFETLQSV
IPDLTPHILRHTKTESLLRDAEAMGLTETQVLETVMYLNGWRTDNRATYTARKREEVARRVATARQEEFFVK
>Mature_391_residues
PQGYHVKILTLQRGINRGERISILLDGSREPVTLANEHMLCGKRLLLSPNTYFNHLSHIALIYKWADEHNISVAQRLLGG
IGFANYEVSSIFATVRKRQRQAKPGTMIVGKTEQRARMVRIKNFVISGMETATANLDPRTDTEKLNALEYRVETTRTLFE
QTTPSKERSPSKKGLTAESVQLLADTLSPGSANNPWRKPLVQHRNFILVMLYLVTGCRRGDLAKVKLSDIVHEQTPYIRF
DAHVSDPNDRRPAEPRLKTLSREYPIHTTVADAVSRYIAQHRVEIPNAADSEYLFLETSEGRELAMRTVNAIFETLQSVI
PDLTPHILRHTKTESLLRDAEAMGLTETQVLETVMYLNGWRTDNRATYTARKREEVARRVATARQEEFFVK

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44676; Mature: 44545

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQGYHVKILTLQRGINRGERISILLDGSREPVTLANEHMLCGKRLLLSPNTYFNHLSHI
CCCCEEEEEEEEECCCCCCCEEEEEECCCCCCEEECCCCHHHCCEEEECCCHHHHHHHHH
ALIYKWADEHNISVAQRLLGGIGFANYEVSSIFATVRKRQRQAKPGTMIVGKTEQRARMV
HHEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHH
RIKNFVISGMETATANLDPRTDTEKLNALEYRVETTRTLFEQTTPSKERSPSKKGLTAES
HHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHH
VQLLADTLSPGSANNPWRKPLVQHRNFILVMLYLVTGCRRGDLAKVKLSDIVHEQTPYIR
HHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEHHHHHHHCCCCCEE
FDAHVSDPNDRRPAEPRLKTLSREYPIHTTVADAVSRYIAQHRVEIPNAADSEYLFLETS
EEEEECCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC
EGRELAMRTVNAIFETLQSVIPDLTPHILRHTKTESLLRDAEAMGLTETQVLETVMYLNG
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
WRTDNRATYTARKREEVARRVATARQEEFFVK
CCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PQGYHVKILTLQRGINRGERISILLDGSREPVTLANEHMLCGKRLLLSPNTYFNHLSHI
CCCEEEEEEEEECCCCCCCEEEEEECCCCCCEEECCCCHHHCCEEEECCCHHHHHHHHH
ALIYKWADEHNISVAQRLLGGIGFANYEVSSIFATVRKRQRQAKPGTMIVGKTEQRARMV
HHEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHH
RIKNFVISGMETATANLDPRTDTEKLNALEYRVETTRTLFEQTTPSKERSPSKKGLTAES
HHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHH
VQLLADTLSPGSANNPWRKPLVQHRNFILVMLYLVTGCRRGDLAKVKLSDIVHEQTPYIR
HHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEHHHHHHHCCCCCEE
FDAHVSDPNDRRPAEPRLKTLSREYPIHTTVADAVSRYIAQHRVEIPNAADSEYLFLETS
EEEEECCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC
EGRELAMRTVNAIFETLQSVIPDLTPHILRHTKTESLLRDAEAMGLTETQVLETVMYLNG
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
WRTDNRATYTARKREEVARRVATARQEEFFVK
CCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA