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The map label for this gene is lolB [H]

Identifier: 53718163

GI number: 53718163

Start: 576173

End: 576796

Strand: Reverse

Name: lolB [H]

Synonym: BPSL0524

Alternate gene names: 53718163

Gene position: 576796-576173 (Counterclockwise)

Preceding gene: 53718164

Following gene: 53718162

Centisome position: 14.16

GC content: 71.31

Gene sequence:

>624_bases
TTGACGACGATGCCGCGTTTTGCCCAACCGCGCGCGCGCGGCGTCGCCCTCGTCGTGGCGGCCGCGGCCGCCGTCCTGCT
CGGCGCCTGCGCGACGCAGCCGCCGCGCGCGCCCGCCGCCGCGCCCGACGCGCGGCAGACCGAGCAGAATCGCGCGTACA
CGGGCCGCTTCGCGGTTCAGTACCAAGACCCGCTCGGCAATCCGCGCAACGTCTACGGCAATTTCGACTGGCAGGAGCAG
GGCACGAACGTGTCGCTCGAACTGCGCAGCCCGCTCGGCCAGACGCTTGCGATCGTGAAATCCGCGCCGGGCGGCGCGTC
GCTCGAACTGCCGAACCGTCAGCCGCAATTCGCGCCAGACGTCGGCGAACTGATGCAGCGCGCGCTCGGCTTCGCGCTGC
CGCTCGACGGCCTGCGCTACTGGCTGTTGCCGACGCCGTCGCCGACGACGCCCGCGACGACGGTGCGCGATCCGCAGGAC
GGCGCGCGAATCAAGGAAATCCGTCAGGACGGCTGGACCATCGATTACGTCGCATACGCCGACGCGCCCGCCGTCGGCGT
GAAGCGCATCAATCTGGCGCGGCAGACGCCGCCCCTCGACATCAAGCTCGTGCTCGACCGCTGA

Upstream 100 bases:

>100_bases
CGCGCGACGAAGCGCGCGCCGCATGGCGCGCGGCGCAGAAGCTCGAACCCGACAACGATACGCTCGTGCAGACGCTCAAG
CGCCTTCAGGTGAACGGACT

Downstream 100 bases:

>100_bases
ACGCGCGCTTTTGCCCGACCAAGTTTGCCTAGCATGACCGATACGACCCGCTCGCTGCGCGACTGCCTCGCCCCGGCGAA
ACTGAACCTGTTCCTGCACA

Product: outer membrane lipoprotein LolB

Products: 5-aminolevulinate; CoA; CO2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MTTMPRFAQPRARGVALVVAAAAAVLLGACATQPPRAPAAAPDARQTEQNRAYTGRFAVQYQDPLGNPRNVYGNFDWQEQ
GTNVSLELRSPLGQTLAIVKSAPGGASLELPNRQPQFAPDVGELMQRALGFALPLDGLRYWLLPTPSPTTPATTVRDPQD
GARIKEIRQDGWTIDYVAYADAPAVGVKRINLARQTPPLDIKLVLDR

Sequences:

>Translated_207_residues
MTTMPRFAQPRARGVALVVAAAAAVLLGACATQPPRAPAAAPDARQTEQNRAYTGRFAVQYQDPLGNPRNVYGNFDWQEQ
GTNVSLELRSPLGQTLAIVKSAPGGASLELPNRQPQFAPDVGELMQRALGFALPLDGLRYWLLPTPSPTTPATTVRDPQD
GARIKEIRQDGWTIDYVAYADAPAVGVKRINLARQTPPLDIKLVLDR
>Mature_206_residues
TTMPRFAQPRARGVALVVAAAAAVLLGACATQPPRAPAAAPDARQTEQNRAYTGRFAVQYQDPLGNPRNVYGNFDWQEQG
TNVSLELRSPLGQTLAIVKSAPGGASLELPNRQPQFAPDVGELMQRALGFALPLDGLRYWLLPTPSPTTPATTVRDPQDG
ARIKEIRQDGWTIDYVAYADAPAVGVKRINLARQTPPLDIKLVLDR

Specific function: Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the lolA protein [H]

COG id: COG3017

COG function: function code M; Outer membrane lipoprotein involved in outer membrane biogenesis

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lolB family [H]

Homologues:

Organism=Escherichia coli, GI1787460, Length=169, Percent_Identity=31.3609467455621, Blast_Score=67, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004565 [H]

Pfam domain/function: PF03550 LolB [H]

EC number: NA

Molecular weight: Translated: 22408; Mature: 22277

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTMPRFAQPRARGVALVVAAAAAVLLGACATQPPRAPAAAPDARQTEQNRAYTGRFAVQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCEEEEEEEEE
YQDPLGNPRNVYGNFDWQEQGTNVSLELRSPLGQTLAIVKSAPGGASLELPNRQPQFAPD
ECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCEEECCCCCCCCCCC
VGELMQRALGFALPLDGLRYWLLPTPSPTTPATTVRDPQDGARIKEIRQDGWTIDYVAYA
HHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEC
DAPAVGVKRINLARQTPPLDIKLVLDR
CCCCCCCEEEEHHCCCCCCEEEEEECC
>Mature Secondary Structure 
TTMPRFAQPRARGVALVVAAAAAVLLGACATQPPRAPAAAPDARQTEQNRAYTGRFAVQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCEEEEEEEEE
YQDPLGNPRNVYGNFDWQEQGTNVSLELRSPLGQTLAIVKSAPGGASLELPNRQPQFAPD
ECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCEEECCCCCCCCCCC
VGELMQRALGFALPLDGLRYWLLPTPSPTTPATTVRDPQDGARIKEIRQDGWTIDYVAYA
HHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEC
DAPAVGVKRINLARQTPPLDIKLVLDR
CCCCCCCEEEEHHCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Succinyl-CoA; glycine [C]

Specific reaction: Succinyl-CoA + glycine = 5-aminolevulinate + CoA + CO2 [C]

General reaction: Acyltransferases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA