| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is hisC1
Identifier: 53718158
GI number: 53718158
Start: 571468
End: 572538
Strand: Reverse
Name: hisC1
Synonym: BPSL0518
Alternate gene names: 53718158
Gene position: 572538-571468 (Counterclockwise)
Preceding gene: 53718159
Following gene: 53718154
Centisome position: 14.05
GC content: 68.35
Gene sequence:
>1071_bases GTGAGCCGTTACTGGAGCGACATCGTCCGTCAACTCGAGCCGTATGTGCCGGGCGAGCAGCCGGCGCTCGCGCATCCCGT CAAGCTGAACACGAACGAGAATCCGTATCCGCCGTCGCCGCGCGCGCTCGACGCGATCCGGCGCGAGCTCGGCGACACGG GCGAAGCGCTGCGCCGCTATCCGGACCCGGTCGCGCGCAGGCTGCGCGAGACGGTGGCGGCCTATCACGGCATCGCGCCC GAGCAGGTGTTCGCCGGCAACGGCTCCGACGAAGTGCTCGCGCACGCGTTCCAGGCGCTCCTGCAACACGACAGGCCGCT GCGCTTCCCGGACATCACGTACAGCTTCTACCCGACCTATGCGCGGCTCTATCGCGTCGCATACGAGACGGTACCGCTCG CCGACGATTTCTCGATCGTCGTCGACGACTATCTCGACGACGCCGGCTGCGTGCTGTTCCCGAACCCGAACGCGCCGACG GGCCGCGCGCTGCCGCTTGCCGACATCGAGCGGATCGTCGCCGCCAACCCGAGCTCGGTTGTCGTGATCGACGAGGCCTA TGTCGATTTCGGCGCGGAATCGGCCGTCTCGCTGATCGCGCGCTATCCGAATCTGCTCGTCGTGCATACCGTGTCGAAGG CGCGCTCGCTCGCCGGCATGCGCGTCGGCTTCGCGTTCGGCGACGCCGCGCTGATCGACGCGCTCACGCGCGTGAAGGAC AGCTTCAACTCGTATCCGCTCGACCGTCTCGCGCAAGTCGCGACGCAAGCGTCGTACGAGGACGAGGCGTGGTTCCAGGC GACGCGCAAGCAGGTGATCGCGAGCCGCGAGCGGCTCGTCGGCGCGCTGGCGGCGCTCGGCTTCGACGTCGTGCCGTCGG CGGCGAATTTCGTGTTCGCGCGCCCTCGTAGCCACGATGCGGCGACGCTCGCCGCGCAACTGAAACAGCGGGAAATTTTC GTGCGGCACTTCAAGCTGCCGCGGATCGACCAGCACTTGCGCATCACGGTCGGCTCGGACGCCGAATGCGACGCGCTCGT CGCGGCGCTGCGGGAGCTGCTCGCCGCTTAA
Upstream 100 bases:
>100_bases AACGGCGCGTAAGCCGCCGCGGGTGCCGCCCGCGCCTGCCGTGCGCGCCCGCCGCGCGCATCGGTTAAGCTCGTCGTTTT AACGCATCAGGAGCCACGTG
Downstream 100 bases:
>100_bases CGTACGACGGGGCACGGGGCGGGCTGGACGACAGGAACGGGCCGACCCGCGCGGTCGGCCGGCGGGCCGCAGCGATATCG GAACGACGTCGGAACAATAC
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase 1
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MSRYWSDIVRQLEPYVPGEQPALAHPVKLNTNENPYPPSPRALDAIRRELGDTGEALRRYPDPVARRLRETVAAYHGIAP EQVFAGNGSDEVLAHAFQALLQHDRPLRFPDITYSFYPTYARLYRVAYETVPLADDFSIVVDDYLDDAGCVLFPNPNAPT GRALPLADIERIVAANPSSVVVIDEAYVDFGAESAVSLIARYPNLLVVHTVSKARSLAGMRVGFAFGDAALIDALTRVKD SFNSYPLDRLAQVATQASYEDEAWFQATRKQVIASRERLVGALAALGFDVVPSAANFVFARPRSHDAATLAAQLKQREIF VRHFKLPRIDQHLRITVGSDAECDALVAALRELLAA
Sequences:
>Translated_356_residues MSRYWSDIVRQLEPYVPGEQPALAHPVKLNTNENPYPPSPRALDAIRRELGDTGEALRRYPDPVARRLRETVAAYHGIAP EQVFAGNGSDEVLAHAFQALLQHDRPLRFPDITYSFYPTYARLYRVAYETVPLADDFSIVVDDYLDDAGCVLFPNPNAPT GRALPLADIERIVAANPSSVVVIDEAYVDFGAESAVSLIARYPNLLVVHTVSKARSLAGMRVGFAFGDAALIDALTRVKD SFNSYPLDRLAQVATQASYEDEAWFQATRKQVIASRERLVGALAALGFDVVPSAANFVFARPRSHDAATLAAQLKQREIF VRHFKLPRIDQHLRITVGSDAECDALVAALRELLAA >Mature_355_residues SRYWSDIVRQLEPYVPGEQPALAHPVKLNTNENPYPPSPRALDAIRRELGDTGEALRRYPDPVARRLRETVAAYHGIAPE QVFAGNGSDEVLAHAFQALLQHDRPLRFPDITYSFYPTYARLYRVAYETVPLADDFSIVVDDYLDDAGCVLFPNPNAPTG RALPLADIERIVAANPSSVVVIDEAYVDFGAESAVSLIARYPNLLVVHTVSKARSLAGMRVGFAFGDAALIDALTRVKDS FNSYPLDRLAQVATQASYEDEAWFQATRKQVIASRERLVGALAALGFDVVPSAANFVFARPRSHDAATLAAQLKQREIFV RHFKLPRIDQHLRITVGSDAECDALVAALRELLAA
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Homologues:
Organism=Escherichia coli, GI1788332, Length=354, Percent_Identity=31.638418079096, Blast_Score=135, Evalue=6e-33, Organism=Escherichia coli, GI1788722, Length=257, Percent_Identity=28.0155642023346, Blast_Score=65, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6322075, Length=382, Percent_Identity=28.0104712041885, Blast_Score=107, Evalue=3e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS81_BURP1 (Q3JW89)
Other databases:
- EMBL: CP000124 - RefSeq: YP_332164.1 - ProteinModelPortal: Q3JW89 - STRING: Q3JW89 - GeneID: 3690866 - GenomeReviews: CP000124_GR - KEGG: bpm:BURPS1710b_0750 - TIGR: BURPS1710b_0750 - eggNOG: COG0079 - HOGENOM: HBG646350 - OMA: MRGELND - ProtClustDB: PRK05387 - HAMAP: MF_01023 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - Gene3D: G3DSA:3.40.640.10 - Gene3D: G3DSA:3.90.1150.10 - TIGRFAMs: TIGR01141
Pfam domain/function: PF00155 Aminotran_1_2; SSF53383 PyrdxlP-dep_Trfase_major
EC number: =2.6.1.9
Molecular weight: Translated: 39286; Mature: 39155
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRYWSDIVRQLEPYVPGEQPALAHPVKLNTNENPYPPSPRALDAIRRELGDTGEALRRY CCHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHC PDPVARRLRETVAAYHGIAPEQVFAGNGSDEVLAHAFQALLQHDRPLRFPDITYSFYPTY CCHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH ARLYRVAYETVPLADDFSIVVDDYLDDAGCVLFPNPNAPTGRALPLADIERIVAANPSSV HHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCE VVIDEAYVDFGAESAVSLIARYPNLLVVHTVSKARSLAGMRVGFAFGDAALIDALTRVKD EEEEHHHHCCCHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHEEHHHCHHHHHHHHHHHHH SFNSYPLDRLAQVATQASYEDEAWFQATRKQVIASRERLVGALAALGFDVVPSAANFVFA HHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE RPRSHDAATLAAQLKQREIFVRHFKLPRIDQHLRITVGSDAECDALVAALRELLAA CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SRYWSDIVRQLEPYVPGEQPALAHPVKLNTNENPYPPSPRALDAIRRELGDTGEALRRY CHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHC PDPVARRLRETVAAYHGIAPEQVFAGNGSDEVLAHAFQALLQHDRPLRFPDITYSFYPTY CCHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH ARLYRVAYETVPLADDFSIVVDDYLDDAGCVLFPNPNAPTGRALPLADIERIVAANPSSV HHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCE VVIDEAYVDFGAESAVSLIARYPNLLVVHTVSKARSLAGMRVGFAFGDAALIDALTRVKD EEEEHHHHCCCHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHEEHHHCHHHHHHHHHHHHH SFNSYPLDRLAQVATQASYEDEAWFQATRKQVIASRERLVGALAALGFDVVPSAANFVFA HHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE RPRSHDAATLAAQLKQREIFVRHFKLPRIDQHLRITVGSDAECDALVAALRELLAA CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA