| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718119
Identifier: 53718119
GI number: 53718119
Start: 520932
End: 521999
Strand: Reverse
Name: 53718119
Synonym: BPSL0480
Alternate gene names: NA
Gene position: 521999-520932 (Counterclockwise)
Preceding gene: 53718120
Following gene: 53718118
Centisome position: 12.81
GC content: 70.13
Gene sequence:
>1068_bases ATGAGCGAGATCCGGGATTCGATCACCTTCCAGAACGCGGCGGCGCTCAAGGCGCAGGCGCGGCTCGGCCCCGGCGTGAT CTGCGGCCTGCGCTCCGAGCGCGCGCCGCTGCCGCTCGTCGTCTCGCCGCACGGCGACAGCGCGCTCGCCGCGGACCGCG ACGCGGCGCTCGCGTGGTTCGACGCGCGCCGCGCGGCATTCGACGCGCTGCTGCTCGAGCACGGCGGCCTGCTGCTGCGC GGCTTCGCGGTGCCCGACACGCATGCGTTTCGCGCGCTGACCGACCGCTATCCGCCGCACGCGTTCGGCTACATCGCCGG CGCGTCGCCGCGCAAGGCGATCGACGGCAACGTGTACGAATCGACGCATCTGCCCGCGCCGTACAAGCTGAGCCTGCATC AGGAAAAGGCGTACATGTCGCACTATCCGCGGCTCATCGCGTTCTACTGCCGGCAGGCTGCGGCCGTCGGCGGCGAAACG CCGCTGTCGGACATGCGCGCCGTCACGCGCCGCCTGCCCGCGCGCACGCTCGAGCGGTTCCGCGGCAAGGGCGTGATGTA CCGGCGCAACTTCTCGGCGAAGCCGATGCCCGCGCACTTCAACCAGTTCTATCGGCGCTGGCAGGACGCGTTCATGACCG ACGAGCGCGCCGAAGTCGAATCGCTCTGCCGCGCGACGCAGCTCGAATACGAGTGGCTGCCCGACGGCAGCCTCACGGTC ACGCACGTGGGCCCGGCGACGGTCGTGCATCCGCGCACGGGCGAGGAAGTGTGGTTCAACCATGCGAGCACGCAGCACAT CAACGCGCGCGTCGTGCACCCGACGATCCTGCGCGCGCTGCAGTCGTTCTACAAGACGCGCGCCGCGCTGCCGTACGACA TCCGCTACGGCGACGGCACGCCGATGCCCGCCGAAGACCTCGATCCCGTCTACGACGCGATCGACGCCGAGGAGACCGCG TTTCGCTGGCGCGAGCAGGACGTGCTGCTGCTCGACAACATCCTCGTCGCGCACGGACGCAACCCGTACAGCGGCCAGCG CGACATCCAGGTCGCGATGATGGACTGA
Upstream 100 bases:
>100_bases CGGCGGCGGGCCTCGCCGAGCACGCGAGCGTGACGAGCCCGCCGTTCGGCCTGGGCGCGCTCGGCTTCGAAATTCTGCTC ACCAAGCCGGGAGAACCGTC
Downstream 100 bases:
>100_bases ATGCGATGAGCCCTGTTCCGTTTCCGGCCGGCGAGGCCGGCGAAGCCCTCGAAGGCGCGCAGACCGCCGAAGCGGTTGAA GCGGCTGAAGCAATGGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: SyrP Protein; SyrP-Like Protein; Non-Ribosomal Peptide Synthetase; Regulatory Protein; Regulatory Protein B; Amino Acid Adenylation Domain Protein; Taurine Catabolism Dioxygenase TauD/TfdA Family; Amino Acid Adenylation Domain-Containing Protein; Pyoverdine Biosynthesis Regulatory Gene; Condensation Domain-Containing Protein; Taurine Catabolism Dioxygenase TauD TfdA Family; Taurine Catabolism Dioxygenase Taud/Tfda; SyrP-Like Regulatory Protein; NRPS-Like Protein; Peptide Synthase; Syringomycin Biosynthesis; Oxidoreductase; Clavaminic Acid Synthetase-Like Protein; Pyoverdine Biosynthesis Regulatory Gene SyrP-Like; Non Ribosomal Peptide Synthase Antibiotic Synthesis; Multi-Domain Non-Ribosomal Peptide Synthetase; Syrp Like Protein Albicidin Biosynthesis Regulation; Regulatory Protein SyrP-Like; Syringomycin Biosynthesis ; Pyoverdine Biosynthesis Regulatory Protein SyrP-Like; Syringomycin Synthesis Regulator SyrP
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MSEIRDSITFQNAAALKAQARLGPGVICGLRSERAPLPLVVSPHGDSALAADRDAALAWFDARRAAFDALLLEHGGLLLR GFAVPDTHAFRALTDRYPPHAFGYIAGASPRKAIDGNVYESTHLPAPYKLSLHQEKAYMSHYPRLIAFYCRQAAAVGGET PLSDMRAVTRRLPARTLERFRGKGVMYRRNFSAKPMPAHFNQFYRRWQDAFMTDERAEVESLCRATQLEYEWLPDGSLTV THVGPATVVHPRTGEEVWFNHASTQHINARVVHPTILRALQSFYKTRAALPYDIRYGDGTPMPAEDLDPVYDAIDAEETA FRWREQDVLLLDNILVAHGRNPYSGQRDIQVAMMD
Sequences:
>Translated_355_residues MSEIRDSITFQNAAALKAQARLGPGVICGLRSERAPLPLVVSPHGDSALAADRDAALAWFDARRAAFDALLLEHGGLLLR GFAVPDTHAFRALTDRYPPHAFGYIAGASPRKAIDGNVYESTHLPAPYKLSLHQEKAYMSHYPRLIAFYCRQAAAVGGET PLSDMRAVTRRLPARTLERFRGKGVMYRRNFSAKPMPAHFNQFYRRWQDAFMTDERAEVESLCRATQLEYEWLPDGSLTV THVGPATVVHPRTGEEVWFNHASTQHINARVVHPTILRALQSFYKTRAALPYDIRYGDGTPMPAEDLDPVYDAIDAEETA FRWREQDVLLLDNILVAHGRNPYSGQRDIQVAMMD >Mature_354_residues SEIRDSITFQNAAALKAQARLGPGVICGLRSERAPLPLVVSPHGDSALAADRDAALAWFDARRAAFDALLLEHGGLLLRG FAVPDTHAFRALTDRYPPHAFGYIAGASPRKAIDGNVYESTHLPAPYKLSLHQEKAYMSHYPRLIAFYCRQAAAVGGETP LSDMRAVTRRLPARTLERFRGKGVMYRRNFSAKPMPAHFNQFYRRWQDAFMTDERAEVESLCRATQLEYEWLPDGSLTVT HVGPATVVHPRTGEEVWFNHASTQHINARVVHPTILRALQSFYKTRAALPYDIRYGDGTPMPAEDLDPVYDAIDAEETAF RWREQDVLLLDNILVAHGRNPYSGQRDIQVAMMD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39873; Mature: 39741
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEIRDSITFQNAAALKAQARLGPGVICGLRSERAPLPLVVSPHGDSALAADRDAALAWF CCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCHHHHHH DARRAAFDALLLEHGGLLLRGFAVPDTHAFRALTDRYPPHAFGYIAGASPRKAIDGNVYE HHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEE STHLPAPYKLSLHQEKAYMSHYPRLIAFYCRQAAAVGGETPLSDMRAVTRRLPARTLERF CCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHH RGKGVMYRRNFSAKPMPAHFNQFYRRWQDAFMTDERAEVESLCRATQLEYEWLPDGSLTV CCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCEEE THVGPATVVHPRTGEEVWFNHASTQHINARVVHPTILRALQSFYKTRAALPYDIRYGDGT EECCCEEEECCCCCCHHEECCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCEEEECCCCC PMPAEDLDPVYDAIDAEETAFRWREQDVLLLDNILVAHGRNPYSGQRDIQVAMMD CCCHHHCCHHHHHCCCHHHHHHHCCCCEEEEHHHHHHCCCCCCCCCCEEEEEEEC >Mature Secondary Structure SEIRDSITFQNAAALKAQARLGPGVICGLRSERAPLPLVVSPHGDSALAADRDAALAWF CCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCHHHHHH DARRAAFDALLLEHGGLLLRGFAVPDTHAFRALTDRYPPHAFGYIAGASPRKAIDGNVYE HHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEE STHLPAPYKLSLHQEKAYMSHYPRLIAFYCRQAAAVGGETPLSDMRAVTRRLPARTLERF CCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHH RGKGVMYRRNFSAKPMPAHFNQFYRRWQDAFMTDERAEVESLCRATQLEYEWLPDGSLTV CCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCEEE THVGPATVVHPRTGEEVWFNHASTQHINARVVHPTILRALQSFYKTRAALPYDIRYGDGT EECCCEEEECCCCCCHHEECCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCEEEECCCCC PMPAEDLDPVYDAIDAEETAFRWREQDVLLLDNILVAHGRNPYSGQRDIQVAMMD CCCHHHCCHHHHHCCCHHHHHHHCCCCEEEEHHHHHHCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA