Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

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The map label for this gene is 53717980

Identifier: 53717980

GI number: 53717980

Start: 361650

End: 361946

Strand: Reverse

Name: 53717980

Synonym: BPSL0339

Alternate gene names: NA

Gene position: 361946-361650 (Counterclockwise)

Preceding gene: 53717981

Following gene: 53717979

Centisome position: 8.88

GC content: 77.1

Gene sequence:

>297_bases
ATGCGCCAGCGCCTCACCGCTCCCGCCGTTGTCGTCGTGGCCGCGCTCTGCGTCGCGCCGCTCGTCGCCGCATGCAGCGA
CGATGCGTCCCACGCGAACGCGGGCGCCGGCACGTCGCCCGCGGCACAGCCGGGCGGCGCGGCGAACGCGTTCAACGGCG
GCGCGACGACGGCCGGCAATGCGAGCGCGAGCGCGCCGCTCGCGACGCCCGTGATCCATTACCCGCCCGAAGACGCCGCC
GACGACGCATCCGGCGCGGCGGCGGCGTCCGCGCAGAGCGCCTCGCATCCTGGCTGA

Upstream 100 bases:

>100_bases
CGTCATAATATGGCGGTCGCAAACGGTTCACGCAACCGACGCATCGTTTCTTCATACTAGCGAACGTTCAGGACCCGCGA
TCCCTCAGGAGACACTTCCG

Downstream 100 bases:

>100_bases
TCGCCTTTGCCGCGCCCTCTTCCCCGCAGAGCCCCAGGTGAAAACATGACATCAGAAAGCCGCCGCCGTTTCCTGCATAC
CGTCGCGCAATCCGCGGGCG

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MRQRLTAPAVVVVAALCVAPLVAACSDDASHANAGAGTSPAAQPGGAANAFNGGATTAGNASASAPLATPVIHYPPEDAA
DDASGAAAASAQSASHPG

Sequences:

>Translated_98_residues
MRQRLTAPAVVVVAALCVAPLVAACSDDASHANAGAGTSPAAQPGGAANAFNGGATTAGNASASAPLATPVIHYPPEDAA
DDASGAAAASAQSASHPG
>Mature_98_residues
MRQRLTAPAVVVVAALCVAPLVAACSDDASHANAGAGTSPAAQPGGAANAFNGGATTAGNASASAPLATPVIHYPPEDAA
DDASGAAAASAQSASHPG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9075; Mature: 9075

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQRLTAPAVVVVAALCVAPLVAACSDDASHANAGAGTSPAAQPGGAANAFNGGATTAGN
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ASASAPLATPVIHYPPEDAADDASGAAAASAQSASHPG
CCCCCCCCCCEEECCCCCCCCCCCCCHHHCCCCCCCCC
>Mature Secondary Structure
MRQRLTAPAVVVVAALCVAPLVAACSDDASHANAGAGTSPAAQPGGAANAFNGGATTAGN
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ASASAPLATPVIHYPPEDAADDASGAAAASAQSASHPG
CCCCCCCCCCEEECCCCCCCCCCCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA