| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is plcN2 [H]
Identifier: 53717979
GI number: 53717979
Start: 359487
End: 361604
Strand: Reverse
Name: plcN2 [H]
Synonym: BPSL0338
Alternate gene names: 53717979
Gene position: 361604-359487 (Counterclockwise)
Preceding gene: 53717980
Following gene: 53717978
Centisome position: 8.87
GC content: 68.08
Gene sequence:
>2118_bases ATGACATCAGAAAGCCGCCGCCGTTTCCTGCATACCGTCGCGCAATCCGCGGGCGCCGCCGCCGCGCTCACCGTGTTTCC CGAATCGATTCGCCGCGCACTCGCGATTCCCGCCGCGTCGCGCACGGGCACGCTGCGCGATGTCGAGCACATCGTCGTGT TCATGCAGGAAAACCGCTCGTTCGACCATTACTTCGGACACCTGCGCGGTGTGCGCGGCTACAACGACCGCTTTCCGATT CCGCTGCCGAACGGCAAACCGGTCTGGTATCAGCCGTCGAAGGCGAATCCGGGCAAGCCGGTGCTGCCGTTTCGCCTGAA CACGCTGACGACGAGCGCCCAGTGCATCGGCGATCTCGATCACTCGTGGTACAAGACGCATGCGGCGATCGACGGCGGCC GCTACGATCAGTGGCCCGCGAACAAGACCGACATGACGATGGGCTACCACGTGCGCGAGGACATCCCGTTCCACTACGCG CTCGCCGACGCGTTCACCGTCTGCGACAACTACTTCTGCTCGCTGCCGGGCCCGACGCATCCGAACCGCTCGTATCTGAT GACGGGCACGGTCGATCCGACCGGCCGGTACGGCGGCCCGCTGCTCGACAACAGCGATTACGTGGACGGCGACGTGCCGC CGAAATACGATCTGCTCACCTGGACGACGTACCCCGAACGCCTCGAGGCGAACGGCATTTCGTGGCAGATCTATCAGCAG GGCACGACGGGGGCCGATCCGCTGAACGGCAACTACGGGACGAACATCCTGCAGAACTTCGCGAACTTCATCAACGCGAA GCCGGGCTCGTCGCTGTATCGGCGCGCGCAGACCGCGCGCACGCTCGACGATCTGAAGGCCGACGTGCTCGCGAACAAGC TGCCGCAGGTGTCGTGGCTGCTGCCGCCCGCGGCGTTCTCCGAGCATCCGAGATACACGCCCGCGTACGGCGCGAACTAC ACGTCGCAGATCCTCGACGCGCTGACGTCGAACCCCGACGTGTGGCGCAAGACCGTGCTCTTCATCATGTACGACGAGAA CGACGGCTTCTTCGATCACGTCGTGCCGCCGCAGCCGGCGACGACGCGCGCGCAGGGCCTGTCGACCGTGACCGTCGACG GCGAGATCCACGACGTCGTGAACCCGGGCCGCGGCGGCAGCTACACGGCCGACGGCCTGCCGTACGGCCTCGGCCCGCGC GTGCCGATGACGGTCGTGTCGCCGTGGACGAAGGGCGGCTTCGTGTGCTCGCAGGTGTTCGACCATACGTCGGTGATCCG CTTCATCGCCGCGCGCTTCGGCATCGACGAGCCGAACATCACGCCGTGGCGCCGCGCGGTGTGCGGCGATCTCACGTCGG CGTTCGACTTCCGCACGCCGGACGCGACGCTGCCGCCGTTGCCCGACACGAGCGGCTATCGGTCGATCGCCGATCAGCTC TGCTCGACGAAGCCCGCGCCCGCCGTGCCCGCCGCGCCGAGCCCCGTCGATCCGCAGGAGCCCGGCGTGCGCCCGGCGCG CGCGCTGCCTTACGAGCTGCACGTGAACGCCGAGGTGCACGGCGGCGCGCGCCTGCGCATCGAGTTCGCGAATCGCGGCG AGCAAGGCGCGCACTTCTATGTGTACGCATCGAATCGCAGCGACGGCCCGTGGCGCTACACGGTCGGCGCGCACCGCTCG TTGCACGAAACGTTCGATCTCGCCGCGACGAACGGCGCGTACGCGTTCGCCGTGTATGGTCCGAACGGCTTCGTGCGCGT GTTCGAAGGCCTCGCCGCGGCCGGAGGCCACGGCCGGCAAGCGGCCGCGCGCCCCGAGGTGAAGGCGGGCTACGACGTCG CGAACGGCAACCTGTATCTGAAGCTCGCGAATCATGGCGCACAGAGCGTGCAACTGACGCTCGCCGACAACGCGTACGGC GCGCCGGCGCGCCGGATCACGCTGCGCGGCGGCGATGAGCAGATCGAATCGTGGGCGCTGGCGTCGAGCCATCAATGGTA TGACGTGACGGTGTCGGACGGCGCGACCGGCCAGTTCGTGCGCCGCTTCGCGGGGCACGTCGAGAACGGCAAGCCGAGCT ATTCCGATCCGGCGGCGATCGCGCCCGTCACGGGCTGA
Upstream 100 bases:
>100_bases CGACGCATCCGGCGCGGCGGCGGCGTCCGCGCAGAGCGCCTCGCATCCTGGCTGATCGCCTTTGCCGCGCCCTCTTCCCC GCAGAGCCCCAGGTGAAAAC
Downstream 100 bases:
>100_bases ACACGGCCGCGCCGGCGGCGGCAACCGTCTGAACGGCGGGGCGACGAACCGGTAGTCCCGCCGCGCCGCCCGGCTTCGAC GGCACGCATCGCGGCATGCT
Product: non-hemolytic phospholipase C
Products: NA
Alternate protein names: PLC-N; Phosphatidylcholine cholinephosphohydrolase; Phosphatidylcholine-hydrolyzing phospholipase C; PC-PLC [H]
Number of amino acids: Translated: 705; Mature: 704
Protein sequence:
>705_residues MTSESRRRFLHTVAQSAGAAAALTVFPESIRRALAIPAASRTGTLRDVEHIVVFMQENRSFDHYFGHLRGVRGYNDRFPI PLPNGKPVWYQPSKANPGKPVLPFRLNTLTTSAQCIGDLDHSWYKTHAAIDGGRYDQWPANKTDMTMGYHVREDIPFHYA LADAFTVCDNYFCSLPGPTHPNRSYLMTGTVDPTGRYGGPLLDNSDYVDGDVPPKYDLLTWTTYPERLEANGISWQIYQQ GTTGADPLNGNYGTNILQNFANFINAKPGSSLYRRAQTARTLDDLKADVLANKLPQVSWLLPPAAFSEHPRYTPAYGANY TSQILDALTSNPDVWRKTVLFIMYDENDGFFDHVVPPQPATTRAQGLSTVTVDGEIHDVVNPGRGGSYTADGLPYGLGPR VPMTVVSPWTKGGFVCSQVFDHTSVIRFIAARFGIDEPNITPWRRAVCGDLTSAFDFRTPDATLPPLPDTSGYRSIADQL CSTKPAPAVPAAPSPVDPQEPGVRPARALPYELHVNAEVHGGARLRIEFANRGEQGAHFYVYASNRSDGPWRYTVGAHRS LHETFDLAATNGAYAFAVYGPNGFVRVFEGLAAAGGHGRQAAARPEVKAGYDVANGNLYLKLANHGAQSVQLTLADNAYG APARRITLRGGDEQIESWALASSHQWYDVTVSDGATGQFVRRFAGHVENGKPSYSDPAAIAPVTG
Sequences:
>Translated_705_residues MTSESRRRFLHTVAQSAGAAAALTVFPESIRRALAIPAASRTGTLRDVEHIVVFMQENRSFDHYFGHLRGVRGYNDRFPI PLPNGKPVWYQPSKANPGKPVLPFRLNTLTTSAQCIGDLDHSWYKTHAAIDGGRYDQWPANKTDMTMGYHVREDIPFHYA LADAFTVCDNYFCSLPGPTHPNRSYLMTGTVDPTGRYGGPLLDNSDYVDGDVPPKYDLLTWTTYPERLEANGISWQIYQQ GTTGADPLNGNYGTNILQNFANFINAKPGSSLYRRAQTARTLDDLKADVLANKLPQVSWLLPPAAFSEHPRYTPAYGANY TSQILDALTSNPDVWRKTVLFIMYDENDGFFDHVVPPQPATTRAQGLSTVTVDGEIHDVVNPGRGGSYTADGLPYGLGPR VPMTVVSPWTKGGFVCSQVFDHTSVIRFIAARFGIDEPNITPWRRAVCGDLTSAFDFRTPDATLPPLPDTSGYRSIADQL CSTKPAPAVPAAPSPVDPQEPGVRPARALPYELHVNAEVHGGARLRIEFANRGEQGAHFYVYASNRSDGPWRYTVGAHRS LHETFDLAATNGAYAFAVYGPNGFVRVFEGLAAAGGHGRQAAARPEVKAGYDVANGNLYLKLANHGAQSVQLTLADNAYG APARRITLRGGDEQIESWALASSHQWYDVTVSDGATGQFVRRFAGHVENGKPSYSDPAAIAPVTG >Mature_704_residues TSESRRRFLHTVAQSAGAAAALTVFPESIRRALAIPAASRTGTLRDVEHIVVFMQENRSFDHYFGHLRGVRGYNDRFPIP LPNGKPVWYQPSKANPGKPVLPFRLNTLTTSAQCIGDLDHSWYKTHAAIDGGRYDQWPANKTDMTMGYHVREDIPFHYAL ADAFTVCDNYFCSLPGPTHPNRSYLMTGTVDPTGRYGGPLLDNSDYVDGDVPPKYDLLTWTTYPERLEANGISWQIYQQG TTGADPLNGNYGTNILQNFANFINAKPGSSLYRRAQTARTLDDLKADVLANKLPQVSWLLPPAAFSEHPRYTPAYGANYT SQILDALTSNPDVWRKTVLFIMYDENDGFFDHVVPPQPATTRAQGLSTVTVDGEIHDVVNPGRGGSYTADGLPYGLGPRV PMTVVSPWTKGGFVCSQVFDHTSVIRFIAARFGIDEPNITPWRRAVCGDLTSAFDFRTPDATLPPLPDTSGYRSIADQLC STKPAPAVPAAPSPVDPQEPGVRPARALPYELHVNAEVHGGARLRIEFANRGEQGAHFYVYASNRSDGPWRYTVGAHRSL HETFDLAATNGAYAFAVYGPNGFVRVFEGLAAAGGHGRQAAARPEVKAGYDVANGNLYLKLANHGAQSVQLTLADNAYGA PARRITLRGGDEQIESWALASSHQWYDVTVSDGATGQFVRRFAGHVENGKPSYSDPAAIAPVTG
Specific function: Hydrolyzes phosphatidylserine as well as phosphatidylcholine [H]
COG id: COG3511
COG function: function code M; Phospholipase C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial phospholipase C family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007312 - InterPro: IPR008475 - InterPro: IPR017767 - InterPro: IPR006311 [H]
Pfam domain/function: PF05506 DUF756; PF04185 Phosphoesterase [H]
EC number: =3.1.4.3 [H]
Molecular weight: Translated: 77022; Mature: 76890
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: PS00389 ATPASE_DELTA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSESRRRFLHTVAQSAGAAAALTVFPESIRRALAIPAASRTGTLRDVEHIVVFMQENRS CCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHCCCCCCCCCCHHHHEEEEEEEECCCC FDHYFGHLRGVRGYNDRFPIPLPNGKPVWYQPSKANPGKPVLPFRLNTLTTSAQCIGDLD HHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEECCCCCHHHHHHCCC HSWYKTHAAIDGGRYDQWPANKTDMTMGYHVREDIPFHYALADAFTVCDNYFCSLPGPTH HHHHHHHEEECCCCCCCCCCCCCCEEECEEECCCCCEEHHHHHHHHHHCCCEECCCCCCC PNRSYLMTGTVDPTGRYGGPLLDNSDYVDGDVPPKYDLLTWTTYPERLEANGISWQIYQQ CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHCCCCCEEEEEEC GTTGADPLNGNYGTNILQNFANFINAKPGSSLYRRAQTARTLDDLKADVLANKLPQVSWL CCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE LPPAAFSEHPRYTPAYGANYTSQILDALTSNPDVWRKTVLFIMYDENDGFFDHVVPPQPA CCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCCCCCC TTRAQGLSTVTVDGEIHDVVNPGRGGSYTADGLPYGLGPRVPMTVVSPWTKGGFVCSQVF CHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHH DHTSVIRFIAARFGIDEPNITPWRRAVCGDLTSAFDFRTPDATLPPLPDTSGYRSIADQL HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH CSTKPAPAVPAAPSPVDPQEPGVRPARALPYELHVNAEVHGGARLRIEFANRGEQGAHFY HCCCCCCCCCCCCCCCCCCCCCCCCHHCCCEEEEEEEEECCCEEEEEEECCCCCCCCEEE VYASNRSDGPWRYTVGAHRSLHETFDLAATNGAYAFAVYGPNGFVRVFEGLAAAGGHGRQ EEECCCCCCCEEEEECCCHHHHHHHHHEECCCEEEEEEECCCCHHHHHHHHHHCCCCCCC AAARPEVKAGYDVANGNLYLKLANHGAQSVQLTLADNAYGAPARRITLRGGDEQIESWAL CCCCCCCCCCCEEECCEEEEEEECCCCCEEEEEEECCCCCCCCEEEEECCCHHHHHHHHH ASSHQWYDVTVSDGATGQFVRRFAGHVENGKPSYSDPAAIAPVTG CCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TSESRRRFLHTVAQSAGAAAALTVFPESIRRALAIPAASRTGTLRDVEHIVVFMQENRS CCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHCCCCCCCCCCHHHHEEEEEEEECCCC FDHYFGHLRGVRGYNDRFPIPLPNGKPVWYQPSKANPGKPVLPFRLNTLTTSAQCIGDLD HHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEECCCCCHHHHHHCCC HSWYKTHAAIDGGRYDQWPANKTDMTMGYHVREDIPFHYALADAFTVCDNYFCSLPGPTH HHHHHHHEEECCCCCCCCCCCCCCEEECEEECCCCCEEHHHHHHHHHHCCCEECCCCCCC PNRSYLMTGTVDPTGRYGGPLLDNSDYVDGDVPPKYDLLTWTTYPERLEANGISWQIYQQ CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHCCCCCEEEEEEC GTTGADPLNGNYGTNILQNFANFINAKPGSSLYRRAQTARTLDDLKADVLANKLPQVSWL CCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE LPPAAFSEHPRYTPAYGANYTSQILDALTSNPDVWRKTVLFIMYDENDGFFDHVVPPQPA CCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCCCCCC TTRAQGLSTVTVDGEIHDVVNPGRGGSYTADGLPYGLGPRVPMTVVSPWTKGGFVCSQVF CHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHH DHTSVIRFIAARFGIDEPNITPWRRAVCGDLTSAFDFRTPDATLPPLPDTSGYRSIADQL HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH CSTKPAPAVPAAPSPVDPQEPGVRPARALPYELHVNAEVHGGARLRIEFANRGEQGAHFY HCCCCCCCCCCCCCCCCCCCCCCCCHHCCCEEEEEEEEECCCEEEEEEECCCCCCCCEEE VYASNRSDGPWRYTVGAHRSLHETFDLAATNGAYAFAVYGPNGFVRVFEGLAAAGGHGRQ EEECCCCCCCEEEEECCCHHHHHHHHHEECCCEEEEEEECCCCHHHHHHHHHHCCCCCCC AAARPEVKAGYDVANGNLYLKLANHGAQSVQLTLADNAYGAPARRITLRGGDEQIESWAL CCCCCCCCCCCEEECCEEEEEEECCCCCEEEEEEECCCCCCCCEEEEECCCHHHHHHHHH ASSHQWYDVTVSDGATGQFVRRFAGHVENGKPSYSDPAAIAPVTG CCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10523590 [H]