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The map label for this gene is yihS [H]

Identifier: 53717962

GI number: 53717962

Start: 341034

End: 342491

Strand: Reverse

Name: yihS [H]

Synonym: BPSL0321

Alternate gene names: 53717962

Gene position: 342491-341034 (Counterclockwise)

Preceding gene: 53717963

Following gene: 53717961

Centisome position: 8.41

GC content: 70.64

Gene sequence:

>1458_bases
ATGACGACCTCAGCCTCGCCCGCCCCCCGTCCGGCGCCCGCCGCGCCGCCCGCCGCCGCGCCGTACGTCGCGAGCTTTCG
CGACCCGCAGTTCCTGCTCGCGCACGTCGAGGACACGCTGCGCTTCTACGCGCCGCACGCATTCGACCCGACGGGCGGCT
TCTACCACTTCTTCCGCGACGACGGCAGCGTCTACGACCGCACGACGCGCCACCTCGTCAGCAGTTGCCGCTTCGTCTTC
AACCATGCGATGGCGTACCGCCATTTCGGCGACGCGCGCGATCTCGATTACGCGCGCCACGGGCTGCGCTTTCTGCGCGA
CGCGCACTGGGACGCCGAGCACGAAGGCTACGACTGGGAAATCGAATGGCGCGACGGCGCGAAGCGCGCGACGCGCGACG
GCACGCGCCACTGCTACGGGCTCGCGTTCGTGCTGCTCGCGGCCGCGCACGCGGCGATGGCGGGCGTCGAAGAGGCGAAG
CCGCTCATCGCGCATACGTTCGATCTGATGGAGCACCGCTTCTGGGATCGCGCGGCGGGCCTCTACGCGGACGACGCGAC
ACCGAACTGGACCGTGTCGAGCTACCGCGGCCAGAACGCGAACATGCACGCGACGGAGGCGCTCCTCGCCGCGTACGAGG
CGACGGGCCACCTCACGTATCTCGATCGCGCGGAGAAGATCGCGACGAACATCGTGCAGCGGCAGGCCGCGCTGTCGCAA
GGGCTCGTGTGGGAACACTTCCATGCCGACTGGTCGGTCGATTGGGAATACAACAAGGAAGACAGCTCGAACATCTTCCG
GCCGTGGGGCTTCCAGCCCGGCCACCAGACCGAATGGGCGAAGCTGCTGCTGATCCTCGAGCGCCACCGCCCGCTCGACT
GGCTCGTGCCGCGCGCGATCGAGCTGTTCGACGCCGCGTTCGCGCACGCGTGGGACAGCGATCACGGCGGCCTCTGCTAC
GGCTTCGGGCCGGACTACACGGTGTGCGACCACGACAAGTACTTCTGGGTGCAGGCGGAAAGCTTCGCGGCGGCCGCGCT
GCTCGCGCAGCGCACCGGCAGCGAGCGCTTCTGGGACTGGTACGACGAGATCTGGCGCTATAGCTGGGCGCACTTCGTCG
ATCACCGCCACGGCGCGTGGTACCGGATCCTCACCTGCGACAACCGCAAGTACAGCGACGAGAAGAGCCCGGCCGGCAAG
ACCGACTATCACACGATGGGCGCGTGCTACGAGGTGCTGCACACGCTCGCGTCGACGCGCGACGACAGCGGGCGCGGCGC
GAACGCGGGCGGCGGCGCGGGCGACGACGACCGCGCCCCGCGCGCGGCGCACGACAACGGGCGCGGCGGCGGCGGCAAGG
GCGGCGGCAAGAGCGGCGGCACGGACGACCACGGCCACCGGGGCGAAGGCGACGCGGCCGACGGCGCCGGGCGCCGCCGC
AATGGAGGCGCGCGATGA

Upstream 100 bases:

>100_bases
CCGCGCAAGCCGAACTCAGCCTCCCCGTGCAGCTCGTCGCGCGGGCCAGCAGCGCAGGCGCCGCACGCGCGCCGCGCACC
CTCACCTCGGTACTCGGATC

Downstream 100 bases:

>100_bases
GCGCAGGATTTCCGCAATTCGTATCGGCGGGCGACATTCTCACCGACATGGTGCGCACCGGCGGCGCGCACTGGACCTCG
CGCCCGGGCGGCGCGGGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MTTSASPAPRPAPAAPPAAAPYVASFRDPQFLLAHVEDTLRFYAPHAFDPTGGFYHFFRDDGSVYDRTTRHLVSSCRFVF
NHAMAYRHFGDARDLDYARHGLRFLRDAHWDAEHEGYDWEIEWRDGAKRATRDGTRHCYGLAFVLLAAAHAAMAGVEEAK
PLIAHTFDLMEHRFWDRAAGLYADDATPNWTVSSYRGQNANMHATEALLAAYEATGHLTYLDRAEKIATNIVQRQAALSQ
GLVWEHFHADWSVDWEYNKEDSSNIFRPWGFQPGHQTEWAKLLLILERHRPLDWLVPRAIELFDAAFAHAWDSDHGGLCY
GFGPDYTVCDHDKYFWVQAESFAAAALLAQRTGSERFWDWYDEIWRYSWAHFVDHRHGAWYRILTCDNRKYSDEKSPAGK
TDYHTMGACYEVLHTLASTRDDSGRGANAGGGAGDDDRAPRAAHDNGRGGGGKGGGKSGGTDDHGHRGEGDAADGAGRRR
NGGAR

Sequences:

>Translated_485_residues
MTTSASPAPRPAPAAPPAAAPYVASFRDPQFLLAHVEDTLRFYAPHAFDPTGGFYHFFRDDGSVYDRTTRHLVSSCRFVF
NHAMAYRHFGDARDLDYARHGLRFLRDAHWDAEHEGYDWEIEWRDGAKRATRDGTRHCYGLAFVLLAAAHAAMAGVEEAK
PLIAHTFDLMEHRFWDRAAGLYADDATPNWTVSSYRGQNANMHATEALLAAYEATGHLTYLDRAEKIATNIVQRQAALSQ
GLVWEHFHADWSVDWEYNKEDSSNIFRPWGFQPGHQTEWAKLLLILERHRPLDWLVPRAIELFDAAFAHAWDSDHGGLCY
GFGPDYTVCDHDKYFWVQAESFAAAALLAQRTGSERFWDWYDEIWRYSWAHFVDHRHGAWYRILTCDNRKYSDEKSPAGK
TDYHTMGACYEVLHTLASTRDDSGRGANAGGGAGDDDRAPRAAHDNGRGGGGKGGGKSGGTDDHGHRGEGDAADGAGRRR
NGGAR
>Mature_484_residues
TTSASPAPRPAPAAPPAAAPYVASFRDPQFLLAHVEDTLRFYAPHAFDPTGGFYHFFRDDGSVYDRTTRHLVSSCRFVFN
HAMAYRHFGDARDLDYARHGLRFLRDAHWDAEHEGYDWEIEWRDGAKRATRDGTRHCYGLAFVLLAAAHAAMAGVEEAKP
LIAHTFDLMEHRFWDRAAGLYADDATPNWTVSSYRGQNANMHATEALLAAYEATGHLTYLDRAEKIATNIVQRQAALSQG
LVWEHFHADWSVDWEYNKEDSSNIFRPWGFQPGHQTEWAKLLLILERHRPLDWLVPRAIELFDAAFAHAWDSDHGGLCYG
FGPDYTVCDHDKYFWVQAESFAAAALLAQRTGSERFWDWYDEIWRYSWAHFVDHRHGAWYRILTCDNRKYSDEKSPAGKT
DYHTMGACYEVLHTLASTRDDSGRGANAGGGAGDDDRAPRAAHDNGRGGGGKGGGKSGGTDDHGHRGEGDAADGAGRRRN
GGAR

Specific function: Unknown

COG id: COG2942

COG function: function code G; N-acyl-D-glucosamine 2-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acylglucosamine 2-epimerase family [H]

Homologues:

Organism=Escherichia coli, GI87082342, Length=410, Percent_Identity=27.5609756097561, Blast_Score=140, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341
- InterPro:   IPR010819 [H]

Pfam domain/function: PF07221 GlcNAc_2-epim [H]

EC number: 5.-.-.- [C]

Molecular weight: Translated: 54437; Mature: 54306

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSASPAPRPAPAAPPAAAPYVASFRDPQFLLAHVEDTLRFYAPHAFDPTGGFYHFFRD
CCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC
DGSVYDRTTRHLVSSCRFVFNHAMAYRHFGDARDLDYARHGLRFLRDAHWDAEHEGYDWE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEE
IEWRDGAKRATRDGTRHCYGLAFVLLAAAHAAMAGVEEAKPLIAHTFDLMEHRFWDRAAG
EEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LYADDATPNWTVSSYRGQNANMHATEALLAAYEATGHLTYLDRAEKIATNIVQRQAALSQ
CEECCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
GLVWEHFHADWSVDWEYNKEDSSNIFRPWGFQPGHQTEWAKLLLILERHRPLDWLVPRAI
CCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
ELFDAAFAHAWDSDHGGLCYGFGPDYTVCDHDKYFWVQAESFAAAALLAQRTGSERFWDW
HHHHHHHHHCCCCCCCCEEEECCCCCEEECCCCEEEEECHHHHHHHHHHHHCCCCHHHHH
YDEIWRYSWAHFVDHRHGAWYRILTCDNRKYSDEKSPAGKTDYHTMGACYEVLHTLASTR
HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
DDSGRGANAGGGAGDDDRAPRAAHDNGRGGGGKGGGKSGGTDDHGHRGEGDAADGAGRRR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NGGAR
CCCCC
>Mature Secondary Structure 
TTSASPAPRPAPAAPPAAAPYVASFRDPQFLLAHVEDTLRFYAPHAFDPTGGFYHFFRD
CCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC
DGSVYDRTTRHLVSSCRFVFNHAMAYRHFGDARDLDYARHGLRFLRDAHWDAEHEGYDWE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEE
IEWRDGAKRATRDGTRHCYGLAFVLLAAAHAAMAGVEEAKPLIAHTFDLMEHRFWDRAAG
EEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LYADDATPNWTVSSYRGQNANMHATEALLAAYEATGHLTYLDRAEKIATNIVQRQAALSQ
CEECCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
GLVWEHFHADWSVDWEYNKEDSSNIFRPWGFQPGHQTEWAKLLLILERHRPLDWLVPRAI
CCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
ELFDAAFAHAWDSDHGGLCYGFGPDYTVCDHDKYFWVQAESFAAAALLAQRTGSERFWDW
HHHHHHHHHCCCCCCCCEEEECCCCCEEECCCCEEEEECHHHHHHHHHHHHCCCCHHHHH
YDEIWRYSWAHFVDHRHGAWYRILTCDNRKYSDEKSPAGKTDYHTMGACYEVLHTLASTR
HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
DDSGRGANAGGGAGDDDRAPRAAHDNGRGGGGKGGGKSGGTDDHGHRGEGDAADGAGRRR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NGGAR
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503 [H]