| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
Click here to switch to the map view.
The map label for this gene is purR [H]
Identifier: 53717963
GI number: 53717963
Start: 342488
End: 343507
Strand: Reverse
Name: purR [H]
Synonym: BPSL0322
Alternate gene names: 53717963
Gene position: 343507-342488 (Counterclockwise)
Preceding gene: 53717964
Following gene: 53717962
Centisome position: 8.43
GC content: 71.76
Gene sequence:
>1020_bases ATGGGCACCACCATTCGCGACGTTGCGCAGGCGGCCAACGTGTCGATCGGCACCGTGTCGCGCGCGCTCAAGAACCAGCC CGGTCTGTCCGAGGCGACGCGCGCGCGCATCGTCGAGATCGCGCACCGCATGAACTACGATCCGACGCAACTGCGTCCGC GGATCAAGCGGCTCACGTTCCTGCTGCATCGCCAGCACAACAACTTCGCGACGACGCCGTTCTTCTCGCATGTGCTGCAC GGCGTCGAGGACGCGTGCCGCGAGCGCGGCATCGTGCCGTCGCTGCTGACGACGGGCCCGACCGACGACGTGATCCGCCA GATGCGCCCGCACGCGCCCGACGCGATCGCGGTCGCGGGCTTCATGGAGCCGGAGACGCTCGAGGCGCTCGCGGCGACCG GCCGGCCGCTCGTCCTCATCGACATCCGCGCGCCCGGCCTGCGCTCGATCAACGTCGACAACGCGGGCGGCGCGGCGCTC GCGATGCATCACCTGTTCGCGTCGGGCCGCCGGCGCGTCGCGTTCATCGGCGGCTCGCTCGCGCACTACAGCATCGCGCA GCGCGCGCTCGGCTATCGCCGCGCCTTCTTCGACGCGGGCATGCTGTTCGATCCTTCGCTCGAGCTGTCGATCGACACGA GCCTCGGCCCCGATGCCGGCGCGGCAAACGCGATGCGGCAGTTGCTCGATGCGGGCGGCGCGCTGCCCGACGCGGTGTTC GCGTACAACGACGCGGCCGCGCTCGCCGCGATGCGCGTGTGCGTCGAGCGCGGCGTGCGCGTGCCCGAGGACATCGCATT CGTCGGCTTCGACGACATCCCGGCCGCCGCGCACGCGGCCCCACCCCTCACGACGCTCGCGATCGACAAGGAAGCGCTCG GCCGGCAAGGCGTCGAGCTGCTGCTCGCCGATTCGCCCGCGCAAGCCGAACTCAGCCTCCCCGTGCAGCTCGTCGCGCGG GCCAGCAGCGCAGGCGCCGCACGCGCGCCGCGCACCCTCACCTCGGTACTCGGATCATGA
Upstream 100 bases:
>100_bases ATAAATAAGCGCTTATAAGCAGCACCCGCCCCACCCCGGAACGTTTCGCGGCGTTTTTTACTATACAATCGCCAACACCC TAAACATCCCGGGTCAAACG
Downstream 100 bases:
>100_bases CGACCTCAGCCTCGCCCGCCCCCCGTCCGGCGCCCGCCGCGCCGCCCGCCGCCGCGCCGTACGTCGCGAGCTTTCGCGAC CCGCAGTTCCTGCTCGCGCA
Product: LacI family regulatory protein
Products: NA
Alternate protein names: Pur regulon repressor; Purine nucleotide synthesis repressor [H]
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MGTTIRDVAQAANVSIGTVSRALKNQPGLSEATRARIVEIAHRMNYDPTQLRPRIKRLTFLLHRQHNNFATTPFFSHVLH GVEDACRERGIVPSLLTTGPTDDVIRQMRPHAPDAIAVAGFMEPETLEALAATGRPLVLIDIRAPGLRSINVDNAGGAAL AMHHLFASGRRRVAFIGGSLAHYSIAQRALGYRRAFFDAGMLFDPSLELSIDTSLGPDAGAANAMRQLLDAGGALPDAVF AYNDAAALAAMRVCVERGVRVPEDIAFVGFDDIPAAAHAAPPLTTLAIDKEALGRQGVELLLADSPAQAELSLPVQLVAR ASSAGAARAPRTLTSVLGS
Sequences:
>Translated_339_residues MGTTIRDVAQAANVSIGTVSRALKNQPGLSEATRARIVEIAHRMNYDPTQLRPRIKRLTFLLHRQHNNFATTPFFSHVLH GVEDACRERGIVPSLLTTGPTDDVIRQMRPHAPDAIAVAGFMEPETLEALAATGRPLVLIDIRAPGLRSINVDNAGGAAL AMHHLFASGRRRVAFIGGSLAHYSIAQRALGYRRAFFDAGMLFDPSLELSIDTSLGPDAGAANAMRQLLDAGGALPDAVF AYNDAAALAAMRVCVERGVRVPEDIAFVGFDDIPAAAHAAPPLTTLAIDKEALGRQGVELLLADSPAQAELSLPVQLVAR ASSAGAARAPRTLTSVLGS >Mature_338_residues GTTIRDVAQAANVSIGTVSRALKNQPGLSEATRARIVEIAHRMNYDPTQLRPRIKRLTFLLHRQHNNFATTPFFSHVLHG VEDACRERGIVPSLLTTGPTDDVIRQMRPHAPDAIAVAGFMEPETLEALAATGRPLVLIDIRAPGLRSINVDNAGGAALA MHHLFASGRRRVAFIGGSLAHYSIAQRALGYRRAFFDAGMLFDPSLELSIDTSLGPDAGAANAMRQLLDAGGALPDAVFA YNDAAALAAMRVCVERGVRVPEDIAFVGFDDIPAAAHAAPPLTTLAIDKEALGRQGVELLLADSPAQAELSLPVQLVARA SSAGAARAPRTLTSVLGS
Specific function: Is the main repressor of the genes involved in the de novo synthesis of purine nucleotides, regulating purB, purC, purEK, purF, purHD, purL, purMN and guaBA expression. PurR is allosterically activated to bind its cognate DNA by binding the purine corepre
COG id: COG1609
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1790369, Length=324, Percent_Identity=31.7901234567901, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI1790194, Length=313, Percent_Identity=31.629392971246, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI1789456, Length=315, Percent_Identity=27.6190476190476, Blast_Score=106, Evalue=3e-24, Organism=Escherichia coli, GI1789202, Length=293, Percent_Identity=30.7167235494881, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1787948, Length=315, Percent_Identity=27.9365079365079, Blast_Score=98, Evalue=8e-22, Organism=Escherichia coli, GI1786540, Length=365, Percent_Identity=27.9452054794521, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1788474, Length=329, Percent_Identity=27.0516717325228, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI1789068, Length=310, Percent_Identity=27.0967741935484, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1787580, Length=315, Percent_Identity=26.031746031746, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI48994940, Length=315, Percent_Identity=28.2539682539683, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI1787906, Length=307, Percent_Identity=26.7100977198697, Blast_Score=66, Evalue=4e-12, Organism=Escherichia coli, GI1790715, Length=317, Percent_Identity=25.2365930599369, Blast_Score=66, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000843 - InterPro: IPR010982 - InterPro: IPR001761 [H]
Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]
EC number: NA
Molecular weight: Translated: 35895; Mature: 35763
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: PS00356 HTH_LACI_1 ; PS50932 HTH_LACI_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTTIRDVAQAANVSIGTVSRALKNQPGLSEATRARIVEIAHRMNYDPTQLRPRIKRLTF CCCHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LLHRQHNNFATTPFFSHVLHGVEDACRERGIVPSLLTTGPTDDVIRQMRPHAPDAIAVAG HHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHCCCCCCCEEEEC FMEPETLEALAATGRPLVLIDIRAPGLRSINVDNAGGAALAMHHLFASGRRRVAFIGGSL CCCHHHHHHHHHCCCCEEEEEECCCCCCEECCCCCCCHHHHHHHHHHCCCCEEEEECCCH AHYSIAQRALGYRRAFFDAGMLFDPSLELSIDTSLGPDAGAANAMRQLLDAGGALPDAVF HHHHHHHHHHHHHHHHHHCCCEECCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCHHH AYNDAAALAAMRVCVERGVRVPEDIAFVGFDDIPAAAHAAPPLTTLAIDKEALGRQGVEL HCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHCCCCCEEEEECHHHHCCCCCEE LLADSPAQAELSLPVQLVARASSAGAARAPRTLTSVLGS EEECCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure GTTIRDVAQAANVSIGTVSRALKNQPGLSEATRARIVEIAHRMNYDPTQLRPRIKRLTF CCHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LLHRQHNNFATTPFFSHVLHGVEDACRERGIVPSLLTTGPTDDVIRQMRPHAPDAIAVAG HHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHCCCCCCCEEEEC FMEPETLEALAATGRPLVLIDIRAPGLRSINVDNAGGAALAMHHLFASGRRRVAFIGGSL CCCHHHHHHHHHCCCCEEEEEECCCCCCEECCCCCCCHHHHHHHHHHCCCCEEEEECCCH AHYSIAQRALGYRRAFFDAGMLFDPSLELSIDTSLGPDAGAANAMRQLLDAGGALPDAVF HHHHHHHHHHHHHHHHHHCCCEECCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCHHH AYNDAAALAAMRVCVERGVRVPEDIAFVGFDDIPAAAHAAPPLTTLAIDKEALGRQGVEL HCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHCCCCCEEEEECHHHHCCCCCEE LLADSPAQAELSLPVQLVARASSAGAARAPRTLTSVLGS EEECCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA