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The map label for this gene is ybgK [H]

Identifier: 53717899

GI number: 53717899

Start: 270173

End: 271252

Strand: Reverse

Name: ybgK [H]

Synonym: BPSL0258

Alternate gene names: 53717899

Gene position: 271252-270173 (Counterclockwise)

Preceding gene: 53717900

Following gene: 53717898

Centisome position: 6.66

GC content: 73.52

Gene sequence:

>1080_bases
ATGAACTCACGCCAAGCAACGGGCGGCATCGAAGTGCTGCGCGCCGGACCGCTGTCGACGATCCAGGATCTCGGCCGCCG
CGGCTATCGCCATCTGGGCGTCGCGCAAAGCGGCGCGCTGGACTCGCTCGCGCTCGAAGTCGGCAATCGCCTCGTCGGCA
ACCGGCCGGACGCCGCCGCGATCGAAATCACGCTCGGCCCCGCGTCGTTTCGCTTCCCGCGCGCGACGCGCATCGCGATC
ACCGGCACCGAGTTCGGCGCGACGCTCGACGGCGCGCCGATCTATTCGTGGTGGAGCGTGCCCGTCGCGGCCGGCCAGAC
GCTCTCGCTGCCCGTCGCCAAGCGCGGGATGCGCGGCTATCTGTGCATCGCGGGCGGCATCGACGTGCTGCCGATGCTCG
GCTCGCGCAGCACCGATCTCGCGTCGCGCTTCGGCGGCCTCGGCGGGCGCGTGCTGCGCGACGGCGACCGGCTGCCCACC
GGCGCGCCGCCGGCGGGCGCGCCCGCGTGCGTCGCGCCCGATGCGCCCGAGTTCGGCGTGAAGGCGCCCGCGTGGTGCGC
GTTCGCGCGCGTCGACGAAGCGCCGCGCCGCCACAAGCACGCGCATGCCGTGTGGGCGATGCCCGTGCGCGTGCTGCCGG
GCCCGCAGTACGCGAGCTTCACGGCGGCGGCGAAGCACGCGTTCTGGGACGAGGAATGGATCGTCACGCCGAACAGCAAC
CGGATGGGCTACCGGCTCGCGGGCGTGAAGCTCGAGCGCGCCGAATCGGCCGACCTGCTGTCGCACGCGGTGCTGCCGGG
CACGATCCAGGTGCCGGGCAACGGCCAGCCGATCGTGCTGATGAACGACGCGCAGACGACAGGCGGCTATCCGCGGATCG
GGGCCGTGATCCGGGCCGATCTCTGGAAGCTCGCGCAGGCGCGGCTGAACCTGCCGATCCGCTTCGTCCGCGTGACGGAC
AAGGCCGCGCGCGACGCGCTCGCCGCCGAGCGCGCGTACCTGCGGCAGATCGACATCGCGATCGAGATGCGCGAGGAAGC
GCTGCAGCGCGCGCTCGCCGCGCGCGCGGCGGCCGCATGA

Upstream 100 bases:

>100_bases
GCCGCACGCCGCTCGCGCTCTTCGATCCCGCGCGCACGCCGCCCACGCTGCTGCAGCCGGGCGATCGCGTACGCTTTATC
GTCGCGGGAGTGCATGCCGG

Downstream 100 bases:

>100_bases
TTCCGGAAGATCGGACGCCGCCGCGCGGCCGGTCGTGAATGCTTTGGGCACAAACGTCATGGAAATCGATTTGAACGCCG
ACCTCGGCGAAGGCTGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MNSRQATGGIEVLRAGPLSTIQDLGRRGYRHLGVAQSGALDSLALEVGNRLVGNRPDAAAIEITLGPASFRFPRATRIAI
TGTEFGATLDGAPIYSWWSVPVAAGQTLSLPVAKRGMRGYLCIAGGIDVLPMLGSRSTDLASRFGGLGGRVLRDGDRLPT
GAPPAGAPACVAPDAPEFGVKAPAWCAFARVDEAPRRHKHAHAVWAMPVRVLPGPQYASFTAAAKHAFWDEEWIVTPNSN
RMGYRLAGVKLERAESADLLSHAVLPGTIQVPGNGQPIVLMNDAQTTGGYPRIGAVIRADLWKLAQARLNLPIRFVRVTD
KAARDALAAERAYLRQIDIAIEMREEALQRALAARAAAA

Sequences:

>Translated_359_residues
MNSRQATGGIEVLRAGPLSTIQDLGRRGYRHLGVAQSGALDSLALEVGNRLVGNRPDAAAIEITLGPASFRFPRATRIAI
TGTEFGATLDGAPIYSWWSVPVAAGQTLSLPVAKRGMRGYLCIAGGIDVLPMLGSRSTDLASRFGGLGGRVLRDGDRLPT
GAPPAGAPACVAPDAPEFGVKAPAWCAFARVDEAPRRHKHAHAVWAMPVRVLPGPQYASFTAAAKHAFWDEEWIVTPNSN
RMGYRLAGVKLERAESADLLSHAVLPGTIQVPGNGQPIVLMNDAQTTGGYPRIGAVIRADLWKLAQARLNLPIRFVRVTD
KAARDALAAERAYLRQIDIAIEMREEALQRALAARAAAA
>Mature_359_residues
MNSRQATGGIEVLRAGPLSTIQDLGRRGYRHLGVAQSGALDSLALEVGNRLVGNRPDAAAIEITLGPASFRFPRATRIAI
TGTEFGATLDGAPIYSWWSVPVAAGQTLSLPVAKRGMRGYLCIAGGIDVLPMLGSRSTDLASRFGGLGGRVLRDGDRLPT
GAPPAGAPACVAPDAPEFGVKAPAWCAFARVDEAPRRHKHAHAVWAMPVRVLPGPQYASFTAAAKHAFWDEEWIVTPNSN
RMGYRLAGVKLERAESADLLSHAVLPGTIQVPGNGQPIVLMNDAQTTGGYPRIGAVIRADLWKLAQARLNLPIRFVRVTD
KAARDALAAERAYLRQIDIAIEMREEALQRALAARAAAA

Specific function: Unknown

COG id: COG1984

COG function: function code E; Allophanate hydrolase subunit 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786930, Length=329, Percent_Identity=44.9848024316109, Blast_Score=270, Evalue=7e-74,
Organism=Saccharomyces cerevisiae, GI6319685, Length=351, Percent_Identity=31.9088319088319, Blast_Score=136, Evalue=5e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003778 [H]

Pfam domain/function: PF02626 AHS2 [H]

EC number: NA

Molecular weight: Translated: 38195; Mature: 38195

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSRQATGGIEVLRAGPLSTIQDLGRRGYRHLGVAQSGALDSLALEVGNRLVGNRPDAAA
CCCCCCCCCEEEEECCCHHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEE
IEITLGPASFRFPRATRIAITGTEFGATLDGAPIYSWWSVPVAAGQTLSLPVAKRGMRGY
EEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCHHHCCCEEECHHHHCCCCEE
LCIAGGIDVLPMLGSRSTDLASRFGGLGGRVLRDGDRLPTGAPPAGAPACVAPDAPEFGV
EEEECCCEEECCCCCCCHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCEECCCCCCCCCC
KAPAWCAFARVDEAPRRHKHAHAVWAMPVRVLPGPQYASFTAAAKHAFWDEEWIVTPNSN
CCCHHHHHHHHHHHHHHHHHCEEEEEEEEEECCCCCCCHHHHHHHHHCCCCCEEECCCCC
RMGYRLAGVKLERAESADLLSHAVLPGTIQVPGNGQPIVLMNDAQTTGGYPRIGAVIRAD
CCCEEEECEEEECCCHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHH
LWKLAQARLNLPIRFVRVTDKAARDALAAERAYLRQIDIAIEMREEALQRALAARAAAA
HHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNSRQATGGIEVLRAGPLSTIQDLGRRGYRHLGVAQSGALDSLALEVGNRLVGNRPDAAA
CCCCCCCCCEEEEECCCHHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEE
IEITLGPASFRFPRATRIAITGTEFGATLDGAPIYSWWSVPVAAGQTLSLPVAKRGMRGY
EEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCHHHCCCEEECHHHHCCCCEE
LCIAGGIDVLPMLGSRSTDLASRFGGLGGRVLRDGDRLPTGAPPAGAPACVAPDAPEFGV
EEEECCCEEECCCCCCCHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCEECCCCCCCCCC
KAPAWCAFARVDEAPRRHKHAHAVWAMPVRVLPGPQYASFTAAAKHAFWDEEWIVTPNSN
CCCHHHHHHHHHHHHHHHHHCEEEEEEEEEECCCCCCCHHHHHHHHHCCCCCEEECCCCC
RMGYRLAGVKLERAESADLLSHAVLPGTIQVPGNGQPIVLMNDAQTTGGYPRIGAVIRAD
CCCEEEECEEEECCCHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHH
LWKLAQARLNLPIRFVRVTDKAARDALAAERAYLRQIDIAIEMREEALQRALAARAAAA
HHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]