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The map label for this gene is ybgL [C]

Identifier: 53717898

GI number: 53717898

Start: 269350

End: 270114

Strand: Reverse

Name: ybgL [C]

Synonym: BPSL0257

Alternate gene names: 53717898

Gene position: 270114-269350 (Counterclockwise)

Preceding gene: 53717899

Following gene: 53717897

Centisome position: 6.63

GC content: 70.33

Gene sequence:

>765_bases
ATGGAAATCGATTTGAACGCCGACCTCGGCGAAGGCTGCGGCTCCGACGAGGCGCTTCTCGACCTCGTCACGTCGGCGAA
CATCGCGTGCGGCTGGCACGCGGGCGGCGCCCAGGCGATGCGCGACTGCGTGCGCTGGGCGGTAGAAAAAGGCGTGTCGA
TCGGCGCGCATCCGAGTTTTCACGATCCGGAGAACTTCGGCCGCAAGGAAATGGATCTGCCCGCGAGCGAGATCTACGCG
GGCGTGCTGTATCAATTGGGCGCGCTATCTGCGTTCGCTCAGGCGGAAGGCGGGCGCATCGCGCACGTGAAGCCGCACGG
CGCGCTGTACAACCAGGCCGCGCGCGAGCCCGAGATCGCCGATGCGGTGGTGTCGGCGATCCACGATTTCGATCCGTCGC
TCGCGGTGTTCGGGCTCGCGAAAAGCGGGTTCGTCGACGCCGCGCGACAGGCGGGGCTCGTCGCCGTCGAGGAAGTGTTC
GCCGACCGCGGCTATCGCGCGGACGGCTCGCTCGTGCCGCGCAGCCAGCCGGGCGCGCTCGTCGACGACGAAAACGAGAT
GCTCGCGCGCACGCTCGAGATGGTCCGCGGCCAGCGCGTGCGCGCGGTCACGGGCGAATGGGTGCCGCTCAACGCGCAGA
CGGTCTGCCTGCACGGCGACGGCCCGCATGCGCTCGCGTTCGCGAAGCGGATCCGCGATGCGCTCGAGGCGGCCGGCATC
GACGTGCACGCGCCCGGCGCGCTGCACGCGGGGGAGCGCGCCTAG

Upstream 100 bases:

>100_bases
GCGCTGCAGCGCGCGCTCGCCGCGCGCGCGGCGGCCGCATGATTCCGGAAGATCGGACGCCGCCGCGCGGCCGGTCGTGA
ATGCTTTGGGCACAAACGTC

Downstream 100 bases:

>100_bases
CGGTTCGGGCAGCCATTCACGCGGAATTCGGACGGCAGGCGCGCGATTCGCCCGCGCGGCCGGCGGCGCTTGTCTTCTCA
GCGACCCGGCCCCGCGCGAG

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MEIDLNADLGEGCGSDEALLDLVTSANIACGWHAGGAQAMRDCVRWAVEKGVSIGAHPSFHDPENFGRKEMDLPASEIYA
GVLYQLGALSAFAQAEGGRIAHVKPHGALYNQAAREPEIADAVVSAIHDFDPSLAVFGLAKSGFVDAARQAGLVAVEEVF
ADRGYRADGSLVPRSQPGALVDDENEMLARTLEMVRGQRVRAVTGEWVPLNAQTVCLHGDGPHALAFAKRIRDALEAAGI
DVHAPGALHAGERA

Sequences:

>Translated_254_residues
MEIDLNADLGEGCGSDEALLDLVTSANIACGWHAGGAQAMRDCVRWAVEKGVSIGAHPSFHDPENFGRKEMDLPASEIYA
GVLYQLGALSAFAQAEGGRIAHVKPHGALYNQAAREPEIADAVVSAIHDFDPSLAVFGLAKSGFVDAARQAGLVAVEEVF
ADRGYRADGSLVPRSQPGALVDDENEMLARTLEMVRGQRVRAVTGEWVPLNAQTVCLHGDGPHALAFAKRIRDALEAAGI
DVHAPGALHAGERA
>Mature_254_residues
MEIDLNADLGEGCGSDEALLDLVTSANIACGWHAGGAQAMRDCVRWAVEKGVSIGAHPSFHDPENFGRKEMDLPASEIYA
GVLYQLGALSAFAQAEGGRIAHVKPHGALYNQAAREPEIADAVVSAIHDFDPSLAVFGLAKSGFVDAARQAGLVAVEEVF
ADRGYRADGSLVPRSQPGALVDDENEMLARTLEMVRGQRVRAVTGEWVPLNAQTVCLHGDGPHALAFAKRIRDALEAAGI
DVHAPGALHAGERA

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=244, Percent_Identity=62.2950819672131, Blast_Score=315, Evalue=2e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 26780; Mature: 26780

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIDLNADLGEGCGSDEALLDLVTSANIACGWHAGGAQAMRDCVRWAVEKGVSIGAHPSF
CEEECCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCC
HDPENFGRKEMDLPASEIYAGVLYQLGALSAFAQAEGGRIAHVKPHGALYNQAAREPEIA
CCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCHHH
DAVVSAIHDFDPSLAVFGLAKSGFVDAARQAGLVAVEEVFADRGYRADGSLVPRSQPGAL
HHHHHHHHHCCCCCEEECCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCE
VDDENEMLARTLEMVRGQRVRAVTGEWVPLNAQTVCLHGDGPHALAFAKRIRDALEAAGI
ECCHHHHHHHHHHHHCCCEEEEECCCEEECCCEEEEEECCCCHHHHHHHHHHHHHHHCCC
DVHAPGALHAGERA
CEECCCCCCCCCCC
>Mature Secondary Structure
MEIDLNADLGEGCGSDEALLDLVTSANIACGWHAGGAQAMRDCVRWAVEKGVSIGAHPSF
CEEECCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCC
HDPENFGRKEMDLPASEIYAGVLYQLGALSAFAQAEGGRIAHVKPHGALYNQAAREPEIA
CCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCHHH
DAVVSAIHDFDPSLAVFGLAKSGFVDAARQAGLVAVEEVFADRGYRADGSLVPRSQPGAL
HHHHHHHHHCCCCCEEECCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCE
VDDENEMLARTLEMVRGQRVRAVTGEWVPLNAQTVCLHGDGPHALAFAKRIRDALEAAGI
ECCHHHHHHHHHHHHCCCEEEEECCCEEECCCEEEEEECCCCHHHHHHHHHHHHHHHCCC
DVHAPGALHAGERA
CEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA