| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53717897
Identifier: 53717897
GI number: 53717897
Start: 267975
End: 268727
Strand: Reverse
Name: 53717897
Synonym: BPSL0256
Alternate gene names: NA
Gene position: 268727-267975 (Counterclockwise)
Preceding gene: 53717898
Following gene: 53717896
Centisome position: 6.6
GC content: 71.45
Gene sequence:
>753_bases ATGCAAGGCACCGTAAGTCTATGGCCGCTGATCGGCGTCGCCGTGATCGTCGTCGGCTTCGCGCTGCGCTTCAATCCGAT GCTGATCGTCGCGACCGCGGCGATCGTGACGGCCGCGAGCGCGCACTTCCCACCCGAGCGGATCCTCGCCGCGATCGGCG CGGGCTTCCTCAAGACGCGCAACATCCCGCTCATCATCCTGCTGCCGCTCGCCGTGATCGGCCTGCTCGAGCGGCACGGG CTGCGCGAACGCGCGCAGGCCTGGATCGCGAGCATCAGGGCGGCCACCGCGGGGCGCCTGCTGATCCTCTATCTGCTCGT GCGCGAGCTGACCGCGGCCGTCGGCCTGACGGGCCTGGGCGGCCATCCGCAGATGGTGCGGCCGCTGATCGCGCCGATGG CCGAAGGCGCGACCGAGAACCGTTTCGGTCCGCTGCCCGACGCGATCCGCCACCGGCTGCGCGCGTACGCGGCCGCGACC GACAACGTCGGCCTCTTCTTCGGCGAGGATATCTTCGTCGCGTTCGGCGCGATCGTGCTGATGGTGACGTTCCTGAAGGA GGCCGGCATCGCCGTCGAGCCGATGCGCGTCGCGCTGTGGGGCATCCCGACCGCCGTGTCCGCGTTCGTGATCCACGGCG CGCGGCTGTGGCTGCTCGATCGCCGGCTCGAGCGCGAACTGCGCGCGAGCGCCGCGCCGCACGCCGCCTCGAATGGCGCG AACGCCGCCGCCGACAACGGAGGCCGCGCATGA
Upstream 100 bases:
>100_bases GAGCCGCGAAGGCCCATCGGCGCGACGGCCGCGCGCCGATCGCAAGCCGCCGCGCGCCGCCCGAAGACGACGCGCGTCAA CCCATGTCAGGAGAATGTTC
Downstream 100 bases:
>100_bases CGCTCACGATCGGTTACCTGTTCTGGCTCGTCGGCCTCGTGCTGCTCGCGGTGGGCGCGACGATCGTCACGGACCGCGCG CACCCGCGCCGCTTCACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MQGTVSLWPLIGVAVIVVGFALRFNPMLIVATAAIVTAASAHFPPERILAAIGAGFLKTRNIPLIILLPLAVIGLLERHG LRERAQAWIASIRAATAGRLLILYLLVRELTAAVGLTGLGGHPQMVRPLIAPMAEGATENRFGPLPDAIRHRLRAYAAAT DNVGLFFGEDIFVAFGAIVLMVTFLKEAGIAVEPMRVALWGIPTAVSAFVIHGARLWLLDRRLERELRASAAPHAASNGA NAAADNGGRA
Sequences:
>Translated_250_residues MQGTVSLWPLIGVAVIVVGFALRFNPMLIVATAAIVTAASAHFPPERILAAIGAGFLKTRNIPLIILLPLAVIGLLERHG LRERAQAWIASIRAATAGRLLILYLLVRELTAAVGLTGLGGHPQMVRPLIAPMAEGATENRFGPLPDAIRHRLRAYAAAT DNVGLFFGEDIFVAFGAIVLMVTFLKEAGIAVEPMRVALWGIPTAVSAFVIHGARLWLLDRRLERELRASAAPHAASNGA NAAADNGGRA >Mature_250_residues MQGTVSLWPLIGVAVIVVGFALRFNPMLIVATAAIVTAASAHFPPERILAAIGAGFLKTRNIPLIILLPLAVIGLLERHG LRERAQAWIASIRAATAGRLLILYLLVRELTAAVGLTGLGGHPQMVRPLIAPMAEGATENRFGPLPDAIRHRLRAYAAAT DNVGLFFGEDIFVAFGAIVLMVTFLKEAGIAVEPMRVALWGIPTAVSAFVIHGARLWLLDRRLERELRASAAPHAASNGA NAAADNGGRA
Specific function: Unknown
COG id: COG3819
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26491; Mature: 26491
Theoretical pI: Translated: 11.60; Mature: 11.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGTVSLWPLIGVAVIVVGFALRFNPMLIVATAAIVTAASAHFPPERILAAIGAGFLKTR CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC NIPLIILLPLAVIGLLERHGLRERAQAWIASIRAATAGRLLILYLLVRELTAAVGLTGLG CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GHPQMVRPLIAPMAEGATENRFGPLPDAIRHRLRAYAAATDNVGLFFGEDIFVAFGAIVL CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHH MVTFLKEAGIAVEPMRVALWGIPTAVSAFVIHGARLWLLDRRLERELRASAAPHAASNGA HHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC NAAADNGGRA CCCCCCCCCC >Mature Secondary Structure MQGTVSLWPLIGVAVIVVGFALRFNPMLIVATAAIVTAASAHFPPERILAAIGAGFLKTR CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC NIPLIILLPLAVIGLLERHGLRERAQAWIASIRAATAGRLLILYLLVRELTAAVGLTGLG CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GHPQMVRPLIAPMAEGATENRFGPLPDAIRHRLRAYAAATDNVGLFFGEDIFVAFGAIVL CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHH MVTFLKEAGIAVEPMRVALWGIPTAVSAFVIHGARLWLLDRRLERELRASAAPHAASNGA HHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC NAAADNGGRA CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA