| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53717841
Identifier: 53717841
GI number: 53717841
Start: 206377
End: 207180
Strand: Reverse
Name: 53717841
Synonym: BPSL0199
Alternate gene names: NA
Gene position: 207180-206377 (Counterclockwise)
Preceding gene: 53717842
Following gene: 53717840
Centisome position: 5.08
GC content: 70.02
Gene sequence:
>804_bases TTGAGCGCGCGCCGCCAGCCGCGCCGCCCCGCCTCGCCTGCGGCGAGCGAGCAGGCGCCCGAGCGACCGCGCAGGCGGCG CGCCCGCCCTCAGGCGGGCGGCCCCGTCTGGCTCTTCGATCTCGACAACACGCTGCACCACGCGTCGCATGCGATCTTCC CGGCGATCAACCGGGCGATGACGCAGTACATCATCGATACGCTGAAAGTCGAGCGCGCGCACGCCGATCATCTGCGCACC CACTACACGCGCCGCTACGGCGCGGCGCTCCTCGGCCTCGCGCGCCATCACCCGATCGATCCGCACGATTTCCTGAAGGT CGTCCACACGTTCGCCGACCTGCCGTCGATGGTGCGCGCCGAGCGCGGGCTCGCGCGGCTCGTCGCTGCGCTGCCCGGCC GCAAGATCGTGCTGACGAACGCCCCCGAAACCTATGCGCGCGCGGTGCTGCGCGAGCTGAAGATCGACCGCCTGTTCGAG CGCGTGATCGCGATCGAGCAGATGCGCGATCGCCGCGCATGGCGCGCGAAGCCCGACGCCACGATGCTGCGCCGGGCGAT GCGCGCGGCGCACGCGCGCCTGCCGGACGCCATCCTCGTCGAGGATACGCGCGGCCACCTGAAGCGCTACAAGCGGCTCG GCATCCGCACCGTCTGGATCACCGGGCACCTGCCCGGCCATCTGCCAAGCTACGGACGACCGCACTATGTCGATCGTCGC ATTGGTTCGCTAAAATCGCTGCGATTGGGCACTCGATCGGGGCGACGAAAATGCAGCCGACTCACCCGCATGACCCGGCA GTAA
Upstream 100 bases:
>100_bases GCGGCGTGAAGTCGGTCCATATCGTCGACGGCCGCATCGAGCATTCGGTGCTGCTCGAAATCCTGACCGAGCAGCCGTTC GGCACGATGATCCGCTCGCA
Downstream 100 bases:
>100_bases CCGCAGCCGCGGAAAACGAACGCAGCGCCGCCACCGCGAACCGCACGCGCCCGAAGCCGGGCGAGCGCCGCGTGCATATC CTGCAGACGCTCGCGTCGAT
Product: haloacid dehalogenase-like hydrolase
Products: NA
Alternate protein names: Hydrolase; HAD-Superfamily Hydrolase; HAD Family Pyrimidine 5-Nucleotidase; HAD Superfamily Hydrolase; HAD Family Hydrolase; Phosphatase; Hydrolase Protein; HAD Superfamily Protein; Haloacid Dehalogenase Superfamily Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Phosphoglycolate Phosphatase; Hydrolase Ripening-Related Protein-Like; Haloacid Dehalogenase-Like Hydrolase Family Protein; Hydrolase Of HAD Superfamily
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MSARRQPRRPASPAASEQAPERPRRRRARPQAGGPVWLFDLDNTLHHASHAIFPAINRAMTQYIIDTLKVERAHADHLRT HYTRRYGAALLGLARHHPIDPHDFLKVVHTFADLPSMVRAERGLARLVAALPGRKIVLTNAPETYARAVLRELKIDRLFE RVIAIEQMRDRRAWRAKPDATMLRRAMRAAHARLPDAILVEDTRGHLKRYKRLGIRTVWITGHLPGHLPSYGRPHYVDRR IGSLKSLRLGTRSGRRKCSRLTRMTRQ
Sequences:
>Translated_267_residues MSARRQPRRPASPAASEQAPERPRRRRARPQAGGPVWLFDLDNTLHHASHAIFPAINRAMTQYIIDTLKVERAHADHLRT HYTRRYGAALLGLARHHPIDPHDFLKVVHTFADLPSMVRAERGLARLVAALPGRKIVLTNAPETYARAVLRELKIDRLFE RVIAIEQMRDRRAWRAKPDATMLRRAMRAAHARLPDAILVEDTRGHLKRYKRLGIRTVWITGHLPGHLPSYGRPHYVDRR IGSLKSLRLGTRSGRRKCSRLTRMTRQ >Mature_266_residues SARRQPRRPASPAASEQAPERPRRRRARPQAGGPVWLFDLDNTLHHASHAIFPAINRAMTQYIIDTLKVERAHADHLRTH YTRRYGAALLGLARHHPIDPHDFLKVVHTFADLPSMVRAERGLARLVAALPGRKIVLTNAPETYARAVLRELKIDRLFER VIAIEQMRDRRAWRAKPDATMLRRAMRAAHARLPDAILVEDTRGHLKRYKRLGIRTVWITGHLPGHLPSYGRPHYVDRRI GSLKSLRLGTRSGRRKCSRLTRMTRQ
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30750; Mature: 30619
Theoretical pI: Translated: 12.20; Mature: 12.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARRQPRRPASPAASEQAPERPRRRRARPQAGGPVWLFDLDNTLHHASHAIFPAINRAM CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH TQYIIDTLKVERAHADHLRTHYTRRYGAALLGLARHHPIDPHDFLKVVHTFADLPSMVRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH ERGLARLVAALPGRKIVLTNAPETYARAVLRELKIDRLFERVIAIEQMRDRRAWRAKPDA HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH TMLRRAMRAAHARLPDAILVEDTRGHLKRYKRLGIRTVWITGHLPGHLPSYGRPHYVDRR HHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHH IGSLKSLRLGTRSGRRKCSRLTRMTRQ HHHHHHHHHCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SARRQPRRPASPAASEQAPERPRRRRARPQAGGPVWLFDLDNTLHHASHAIFPAINRAM CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH TQYIIDTLKVERAHADHLRTHYTRRYGAALLGLARHHPIDPHDFLKVVHTFADLPSMVRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH ERGLARLVAALPGRKIVLTNAPETYARAVLRELKIDRLFERVIAIEQMRDRRAWRAKPDA HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH TMLRRAMRAAHARLPDAILVEDTRGHLKRYKRLGIRTVWITGHLPGHLPSYGRPHYVDRR HHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHH IGSLKSLRLGTRSGRRKCSRLTRMTRQ HHHHHHHHHCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA